BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00008938
         (1373 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002278931.1| PREDICTED: WD-40 repeat-containing protein M...   496   e-138
ref|XP_002306184.1| nucleosome/chromatin assembly factor group [...   487   e-135
ref|XP_002312960.1| nucleosome/chromatin assembly factor group [...   484   e-134
ref|XP_002534420.1| retinoblastoma-binding protein, putative [Ri...   481   e-133
gb|ABR18459.1| unknown [Picea sitchensis]                             471   e-130

>ref|XP_002278931.1| PREDICTED: WD-40 repeat-containing protein MSI2 [Vitis vinifera]
            gi|297744608|emb|CBI37870.3| unnamed protein product
            [Vitis vinifera]
          Length = 401

 Score =  496 bits (1278), Expect = e-138
 Identities = 246/384 (64%), Positives = 287/384 (74%), Gaps = 19/384 (4%)
 Frame = -1

Query: 1244 FKVWKKNTPFLYDLVISHALEWPSLTVQWLPSS------------KLILGTHTSDDAPNF 1101
            F VWKKNTPFLYDL+ISH LEWPSLTVQ+LPS             KL+LGTHTSD  PN+
Sbjct: 15   FTVWKKNTPFLYDLIISHPLEWPSLTVQFLPSPPLPYALDSFSVHKLVLGTHTSDGFPNY 74

Query: 1100 LMIADVRLQGSSTA-------LPQVQITQQMHVDGEVNRARYMPQNPNLIAAKTSGSEVY 942
            LM+AD  L  ++ A       +P+V+IT+++HVDGEVNRAR MPQNP+++AAKTSG EVY
Sbjct: 75   LMVADAFLPRNTAAPSEQNPTIPKVEITKKIHVDGEVNRARCMPQNPDMVAAKTSGLEVY 134

Query: 941  VFDCTKQPLDHEGASCNPDLRLKGHTEEGYGLSWSPLKEGYLLSGSNDSKICLWDISSAP 762
            VF+C K P+  EG SCNPDLRL+GH +EGYGLSWS  K GY+LSGSND K+CLWD+S++ 
Sbjct: 135  VFNCQKPPVGGEGRSCNPDLRLRGHEKEGYGLSWSSFKGGYVLSGSNDCKVCLWDVSASA 194

Query: 761  LGTELDPMATYQGHEDIVEHVSWHSKNDYLFGSVGDDKKLAIWDLRSSTPNKPQNSVIAH 582
                L  M  Y+ HE++VE VSWH KN+ LFGSVGDD +L IWDLR    +KPQ+SVI H
Sbjct: 195  EDKVLGAMHVYEAHENVVEDVSWHLKNENLFGSVGDDCRLMIWDLRL---DKPQHSVIVH 251

Query: 581  ESEVNYLSFNPFNEWILATASSDSTVNLFDLRKLTKALHSFSGHMEEVFQVEWSPNHETV 402
            E EVN+LSFNP+NEWILATASSD+TV LFD+RKL   LH  S H EEVFQVEW PNHETV
Sbjct: 252  EKEVNFLSFNPYNEWILATASSDTTVGLFDMRKLNSPLHVLSSHTEEVFQVEWDPNHETV 311

Query: 401  LASSAGDRRLNIWDLSRIXXXXXXXXXXXXXXELLFSHGGHTAKISDFSWNQKEAWVISS 222
            LASSA DRRL +WDL+RI              ELLFSHGGH AKISDFSWN+ E WVISS
Sbjct: 312  LASSADDRRLMVWDLNRIGEEQLEGDAADGPPELLFSHGGHKAKISDFSWNKNEPWVISS 371

Query: 221  VSEDNILQIWQMAENIYADERNIQ 150
            V+EDN LQIW+M E IY DE   Q
Sbjct: 372  VAEDNTLQIWKMTEGIYRDEDGTQ 395


>ref|XP_002306184.1| nucleosome/chromatin assembly factor group [Populus trichocarpa]
            gi|222849148|gb|EEE86695.1| nucleosome/chromatin assembly
            factor group [Populus trichocarpa]
          Length = 417

 Score =  487 bits (1253), Expect = e-135
 Identities = 242/397 (60%), Positives = 287/397 (72%), Gaps = 28/397 (7%)
 Frame = -1

Query: 1244 FKVWKKNTPFLYDLVISHALEWPSLTVQWLPSS---------------KLILGTHTSDDA 1110
            F VWKKNTP LYDLVISH LEWPSLTVQW+P +               KL+LGTHTSDD 
Sbjct: 19   FSVWKKNTPVLYDLVISHPLEWPSLTVQWVPLAAPLPHPTDPSSFSIHKLVLGTHTSDDF 78

Query: 1109 PNFLMIADVRLQGS-------------STALPQVQITQQMHVDGEVNRARYMPQNPNLIA 969
            PNFLM+AD  L  S              + +P+V+ITQ++ VDGEVNRAR MPQNP ++ 
Sbjct: 79   PNFLMVADAVLPTSVADAKIDTSCSSADSVIPKVEITQKIRVDGEVNRARCMPQNPAIVG 138

Query: 968  AKTSGSEVYVFDCTKQPLDHEGASCNPDLRLKGHTEEGYGLSWSPLKEGYLLSGSNDSKI 789
            AKTSG EVYVFD TKQ    +   C+PDLRL GH +EGYGLSWSP K+GYL+SGS+D++I
Sbjct: 139  AKTSGCEVYVFDSTKQAERKQRDGCDPDLRLTGHDKEGYGLSWSPFKQGYLVSGSHDNRI 198

Query: 788  CLWDISSAPLGTELDPMATYQGHEDIVEHVSWHSKNDYLFGSVGDDKKLAIWDLRSSTPN 609
            CLWD+S       L  +  Y+ HE +VE VSWH KN+ LFGSVGDD +L IWD+R+   N
Sbjct: 199  CLWDVSGNAQDKVLGALQVYEAHESVVEDVSWHLKNENLFGSVGDDCRLVIWDMRT---N 255

Query: 608  KPQNSVIAHESEVNYLSFNPFNEWILATASSDSTVNLFDLRKLTKALHSFSGHMEEVFQV 429
            + Q+SV AH+ E+NYLSFNP+NEWILATASSD+TV LFD+RKLT  LH+ S H EEVFQV
Sbjct: 256  QTQHSVKAHKKEINYLSFNPYNEWILATASSDATVGLFDMRKLTVPLHALSSHTEEVFQV 315

Query: 428  EWSPNHETVLASSAGDRRLNIWDLSRIXXXXXXXXXXXXXXELLFSHGGHTAKISDFSWN 249
            EW PNHETVLASSA DRRLNIWDL+RI              ELLFSHGGH AKISDFSWN
Sbjct: 316  EWDPNHETVLASSADDRRLNIWDLNRIGEEQLELDADDGPPELLFSHGGHKAKISDFSWN 375

Query: 248  QKEAWVISSVSEDNILQIWQMAENIYADERNIQVDIP 138
            + E+WVISSV++DN LQ+WQMAE+IY D+  +  D P
Sbjct: 376  KDESWVISSVADDNTLQVWQMAESIYGDDDIVAADEP 412


>ref|XP_002312960.1| nucleosome/chromatin assembly factor group [Populus trichocarpa]
            gi|222849368|gb|EEE86915.1| nucleosome/chromatin assembly
            factor group [Populus trichocarpa]
          Length = 406

 Score =  484 bits (1245), Expect = e-134
 Identities = 242/389 (62%), Positives = 286/389 (73%), Gaps = 28/389 (7%)
 Frame = -1

Query: 1244 FKVWKKNTPFLYDLVISHALEWPSLTVQWLPSS---------------KLILGTHTSDDA 1110
            F VWKKNTPFLYD VISH LEWPSLTVQW+P +               KL+LGTHTSDD 
Sbjct: 19   FSVWKKNTPFLYDFVISHPLEWPSLTVQWVPLATPLPHSTDPSSFSVHKLVLGTHTSDDF 78

Query: 1109 PNFLMIADVRL-----------QGSST--ALPQVQITQQMHVDGEVNRARYMPQNPNLIA 969
            PN+L+IAD  L            GSST   +P+V+ITQ++ VDGEVNRAR MPQNP ++ 
Sbjct: 79   PNYLLIADAVLPTSVAEAKIDASGSSTNSVIPKVEITQKIRVDGEVNRARSMPQNPAIVG 138

Query: 968  AKTSGSEVYVFDCTKQPLDHEGASCNPDLRLKGHTEEGYGLSWSPLKEGYLLSGSNDSKI 789
            AKTSG EVYVFD TKQ    +   C+PDLRL GH +EGYGLSWSP K+GYL+SGS+D++I
Sbjct: 139  AKTSGCEVYVFDSTKQAERKQRDGCDPDLRLTGHDKEGYGLSWSPFKQGYLVSGSHDNRI 198

Query: 788  CLWDISSAPLGTELDPMATYQGHEDIVEHVSWHSKNDYLFGSVGDDKKLAIWDLRSSTPN 609
            CLWD+S+      L  +  Y+ HE +VE VSWH KN+ LFGSVGDD +L IWDLR+   N
Sbjct: 199  CLWDVSAVAQDKVLGALQVYEAHESVVEDVSWHLKNENLFGSVGDDCQLIIWDLRT---N 255

Query: 608  KPQNSVIAHESEVNYLSFNPFNEWILATASSDSTVNLFDLRKLTKALHSFSGHMEEVFQV 429
            + Q+SV AHE E+NYLSFNP+NEWILATASSD+TV LFD+RKLT  LH+   ++EEVFQV
Sbjct: 256  QIQHSVKAHEKEINYLSFNPYNEWILATASSDATVGLFDMRKLTVPLHALRSNIEEVFQV 315

Query: 428  EWSPNHETVLASSAGDRRLNIWDLSRIXXXXXXXXXXXXXXELLFSHGGHTAKISDFSWN 249
            EW PNHETVLASSA DRRLN+WDL+RI              ELLFSHGGH AKISDFSWN
Sbjct: 316  EWDPNHETVLASSADDRRLNVWDLNRIGEEQLELDADDGPPELLFSHGGHKAKISDFSWN 375

Query: 248  QKEAWVISSVSEDNILQIWQMAENIYADE 162
            + E WVISSV++DN LQ+WQMAE+IY DE
Sbjct: 376  KNEPWVISSVADDNTLQVWQMAESIYRDE 404


>ref|XP_002534420.1| retinoblastoma-binding protein, putative [Ricinus communis]
            gi|223525325|gb|EEF27964.1| retinoblastoma-binding
            protein, putative [Ricinus communis]
          Length = 415

 Score =  481 bits (1239), Expect = e-133
 Identities = 239/387 (61%), Positives = 280/387 (72%), Gaps = 26/387 (6%)
 Frame = -1

Query: 1244 FKVWKKNTPFLYDLVISHALEWPSLTVQWLPSS---------------KLILGTHTSDDA 1110
            F VWKKNTPFLYDLVISH LEWPSLTV WLP +               KL+LGTHTSDD 
Sbjct: 22   FSVWKKNTPFLYDLVISHPLEWPSLTVHWLPLAAPLPHPTNPSSFSVHKLVLGTHTSDDF 81

Query: 1109 PNFLMIADVRL-----------QGSSTALPQVQITQQMHVDGEVNRARYMPQNPNLIAAK 963
            PNFLMIAD  L           +   + +P+V+I+Q++ VDGEVNRAR MPQNP  IAAK
Sbjct: 82   PNFLMIADAVLPIRGAQPKFDAKSEDSLIPKVEISQKIRVDGEVNRARCMPQNPAFIAAK 141

Query: 962  TSGSEVYVFDCTKQPLDHEGASCNPDLRLKGHTEEGYGLSWSPLKEGYLLSGSNDSKICL 783
            TSG +VYVFD TKQ    +   C+PDL L+GH +EGYGLSWSP K GYL+SGS+D+KICL
Sbjct: 142  TSGCDVYVFDSTKQSERQQDDGCDPDLTLRGHDKEGYGLSWSPFKPGYLVSGSHDNKICL 201

Query: 782  WDISSAPLGTELDPMATYQGHEDIVEHVSWHSKNDYLFGSVGDDKKLAIWDLRSSTPNKP 603
            WD+S+      LD M  Y+ H+ +VE VSWH KN+ +FGSVGDD  L IWDLR+   N+ 
Sbjct: 202  WDVSAVAKDKVLDSMHVYEAHDSVVEDVSWHLKNENIFGSVGDDCMLMIWDLRT---NQT 258

Query: 602  QNSVIAHESEVNYLSFNPFNEWILATASSDSTVNLFDLRKLTKALHSFSGHMEEVFQVEW 423
            Q+S+ AHE EVNYLSFNP+NEWILATASSD+TV LFD+RKL   LH  SGH EEVFQVEW
Sbjct: 259  QHSIKAHEKEVNYLSFNPYNEWILATASSDATVGLFDMRKLIAPLHVLSGHTEEVFQVEW 318

Query: 422  SPNHETVLASSAGDRRLNIWDLSRIXXXXXXXXXXXXXXELLFSHGGHTAKISDFSWNQK 243
             PNHETVLAS+A DRRLN+WDL+RI              ELLFSHGGH AKISDFSWN+ 
Sbjct: 319  DPNHETVLASTADDRRLNVWDLNRIGEEQLELDAEDGPPELLFSHGGHKAKISDFSWNKN 378

Query: 242  EAWVISSVSEDNILQIWQMAENIYADE 162
            + WVISSV++DN LQ+WQM E IY D+
Sbjct: 379  DPWVISSVADDNTLQVWQMDEGIYRDD 405


>gb|ABR18459.1| unknown [Picea sitchensis]
          Length = 421

 Score =  471 bits (1213), Expect = e-130
 Identities = 233/395 (58%), Positives = 284/395 (71%), Gaps = 31/395 (7%)
 Frame = -1

Query: 1244 FKVWKKNTPFLYDLVISHALEWPSLTVQWLPS-----------SKLILGTHTSDDAPNFL 1098
            +K+WKKNTPFLYDLVI+HALEWPSLTVQWLP             K+ILGTHTSD+ PN+L
Sbjct: 21   YKIWKKNTPFLYDLVITHALEWPSLTVQWLPDREEPPGKDYSVQKMILGTHTSDNEPNYL 80

Query: 1097 MIADVRLQ-------------------GSSTALPQVQITQQMHVDGEVNRARYMPQNPNL 975
            M+A V+L                    G   A  +VQ+ QQ++ DGEVNRARYMPQNP +
Sbjct: 81   MLAQVQLPLEDAENDARQYDDERGEIGGFGCANGKVQVIQQINHDGEVNRARYMPQNPFI 140

Query: 974  IAAKTSGSEVYVFDCTKQPLDH-EGASCNPDLRLKGHTEEGYGLSWSPLKEGYLLSGSND 798
            IA KT  +EVYVFD +K P    +   CNPDLRL+GH  EGYGLSWSP K G+LLSGS+D
Sbjct: 141  IATKTVSAEVYVFDYSKHPSKPPQDGGCNPDLRLRGHNTEGYGLSWSPFKHGHLLSGSDD 200

Query: 797  SKICLWDISSAPLGTELDPMATYQGHEDIVEHVSWHSKNDYLFGSVGDDKKLAIWDLRSS 618
            ++ICLWDI++      L+    ++ HE +VE V+WH +++YLFGSVGDD+ L IWDLR+S
Sbjct: 201  AQICLWDINAPAKNKVLEAQQIFKVHEGVVEDVAWHLRHEYLFGSVGDDRHLLIWDLRTS 260

Query: 617  TPNKPQNSVIAHESEVNYLSFNPFNEWILATASSDSTVNLFDLRKLTKALHSFSGHMEEV 438
              NKP +SV+AH+ EVN L+FNPFNEW+LAT S+D TV LFDLRK+T ALH+FS H EEV
Sbjct: 261  AANKPLHSVVAHQGEVNCLAFNPFNEWVLATGSADRTVKLFDLRKITSALHTFSCHKEEV 320

Query: 437  FQVEWSPNHETVLASSAGDRRLNIWDLSRIXXXXXXXXXXXXXXELLFSHGGHTAKISDF 258
            FQ+ WSP +ET+LAS + DRRL +WDLSRI              ELLF HGGHT+KISDF
Sbjct: 321  FQIGWSPKNETILASCSADRRLMVWDLSRIDDEQTPEDAEDGPPELLFIHGGHTSKISDF 380

Query: 257  SWNQKEAWVISSVSEDNILQIWQMAENIYADERNI 153
            SWN  E WVI+SV+EDNILQIWQMAENIY DE ++
Sbjct: 381  SWNPCEDWVIASVAEDNILQIWQMAENIYHDEEDM 415