BLASTX nr result

ID: Cimicifuga21_contig00008905 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00008905
         (768 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN77786.1| hypothetical protein VITISV_023232 [Vitis vinifera]    65   1e-08
emb|CBI15337.3| unnamed protein product [Vitis vinifera]               59   1e-06
ref|XP_002310062.1| predicted protein [Populus trichocarpa] gi|2...    58   2e-06

>emb|CAN77786.1| hypothetical protein VITISV_023232 [Vitis vinifera]
          Length = 377

 Score = 65.5 bits (158), Expect = 1e-08
 Identities = 49/178 (27%), Positives = 85/178 (47%), Gaps = 6/178 (3%)
 Frame = +3

Query: 72  RESMQLPKTILETKGRSISVSFGFDPTNXXXXXXXXXXXXEDENSNASIKGEIITLGEES 251
           R+ + LP+++  +      V  G+DP N              +NS  + + EIITLGE S
Sbjct: 133 RKYIVLPESVNASYSFIQLVGLGYDPWNMKYKVVRSYI----DNSKFT-RFEIITLGEAS 187

Query: 252 WIELEVSHTVISSSYGKPVFLDDALHWIIDKDCHPGRHG-ILVLDMCNEKFWTVKFPLSL 428
           W +L+V   V+     +P++ + AL+WI+DK  H    G IL  D+  EKF  +  P ++
Sbjct: 188 WRQLDVPCRVVCGRNSRPIYCEGALYWILDKKFHYDGDGCILAFDLREEKFGMIALPPNI 247

Query: 429 TRSVKFP----REVFLLNLGGSLCLVEHGYWE*FCVWRIARSNNTKTGYKFYQSS-HC 587
                 P      + LLN+ G L ++     +   +W++ R+ +     ++ +S  HC
Sbjct: 248 RMPTGNPGLYNGSLHLLNVAGCLTVIA-DECQFLHIWQVMRNRDRGFSVRYRRSDMHC 304


>emb|CBI15337.3| unnamed protein product [Vitis vinifera]
          Length = 552

 Score = 58.9 bits (141), Expect = 1e-06
 Identities = 49/164 (29%), Positives = 71/164 (43%), Gaps = 6/164 (3%)
 Frame = +3

Query: 129 VSFGFDPTNXXXXXXXXXXXXEDENSNASIKGEIITLGEESWIELEVSHTVISSSYGKPV 308
           V  GFD +N             D++ +   K E I LGE SW  L V   +   +    V
Sbjct: 293 VGLGFDSSNGKYIVVRAYT---DKSKSQVNKFEAIMLGENSWRSLTVPDIIAECTINGSV 349

Query: 309 FLDDALHWIIDKDCHPGRHGILVLDMCNEKFWTVKFPLSLTRSVKFPREVFLLNLGGSLC 488
           F + ALHW I K   PGR  +L  D+ + KF   +FP+    S   P +  ++ L G L 
Sbjct: 350 FWNGALHWKIKK--KPGRECMLSFDVSSGKFAVTRFPV----SADVPDDFEMVELDGHLS 403

Query: 489 LVEHGYWE*FCVWRIARSNNTKTGYKF------YQSSHCMTISY 602
           LV+  Y     +WR+       TG K       Y+  +CM + +
Sbjct: 404 LVQ-VYDTQMKIWRV-------TGEKIEGLSVCYEDMYCMNVRW 439


>ref|XP_002310062.1| predicted protein [Populus trichocarpa] gi|222852965|gb|EEE90512.1|
           predicted protein [Populus trichocarpa]
          Length = 394

 Score = 58.2 bits (139), Expect = 2e-06
 Identities = 56/203 (27%), Positives = 91/203 (44%)
 Frame = +3

Query: 72  RESMQLPKTILETKGRSISVSFGFDPTNXXXXXXXXXXXXEDENSNASIKGEIITLGEES 251
           +ES+ LP +  +       ++FGFD ++             +++ +   K +IITLGE S
Sbjct: 145 KESVILPLSRSKAHLVRHKLAFGFDQSSGKYKVIRDYRTSSNKHLS---KFQIITLGESS 201

Query: 252 WIELEVSHTVISSSYGKPVFLDDALHWIIDKDCHPGRHGILVLDMCNEKFWTVKFPLSLT 431
           W +L     + +S +   VF + +LHWIID         IL  D+ +E F+T+ F     
Sbjct: 202 WRQLNPPQNLCTSDWDAAVFWNGSLHWIIDDKTID--EPILAFDLSSETFYTIPFHRLCL 259

Query: 432 RSVKFPREVFLLNLGGSLCLVEHGYWE*FCVWRIARSNNTKTGYKFYQSSHCMTISYKPI 611
               +  +V    LG SL +VEH       +W +A   N   G+    S++C       +
Sbjct: 260 SHECYELQV----LGASLTIVEHNS-HMIKIWEVA--GNKVKGF----SANCREEHDTYV 308

Query: 612 IWSIKLHDKRVDNSFLFHAS*MI 680
            W+  L  K +  S L H S M+
Sbjct: 309 CWNKYLFYKTI--SQLSHKSFML 329


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