BLASTX nr result

ID: Cimicifuga21_contig00008894 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00008894
         (681 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002300676.1| predicted protein [Populus trichocarpa] gi|2...    77   3e-12
ref|XP_002510608.1| conserved hypothetical protein [Ricinus comm...    75   1e-11
emb|CAN63667.1| hypothetical protein VITISV_013184 [Vitis vinifera]    75   2e-11
ref|NP_001168586.1| uncharacterized protein LOC100382370 [Zea ma...    74   4e-11
ref|XP_002510609.1| conserved hypothetical protein [Ricinus comm...    72   8e-11

>ref|XP_002300676.1| predicted protein [Populus trichocarpa] gi|222842402|gb|EEE79949.1|
           predicted protein [Populus trichocarpa]
          Length = 305

 Score = 77.0 bits (188), Expect = 3e-12
 Identities = 52/132 (39%), Positives = 65/132 (49%), Gaps = 6/132 (4%)
 Frame = +1

Query: 226 LPDHLLELVVERLC-LPDLFSFGRVCKPWRSVCD--PSQFQNHLPWLIVPSITNSNSDSM 396
           LP  LL+L+ ++     D      VCK WRS     P      LPWL++P   +S +   
Sbjct: 7   LPPELLQLITQKQTNYVDYLCVRAVCKSWRSALPKKPHDLLCQLPWLLLPYQNDSPNHR- 65

Query: 397 AFETETAGFYSLRDGKIYKAELPELSNRRICGSFSGGWLMTVHENSEIQLFNPF--IASS 570
                  GFY+L DGK Y+ ELPE   +R CGS S GWL+ V E   I L NP     S 
Sbjct: 66  -------GFYNLADGKTYRLELPEAYEKRCCGS-SHGWLVMVEETPAIFLLNPLKKPESI 117

Query: 571 IIHLPP-LTKFP 603
            +H PP L  FP
Sbjct: 118 FLHYPPSLINFP 129


>ref|XP_002510608.1| conserved hypothetical protein [Ricinus communis]
           gi|223551309|gb|EEF52795.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 406

 Score = 75.1 bits (183), Expect = 1e-11
 Identities = 49/129 (37%), Positives = 64/129 (49%), Gaps = 3/129 (2%)
 Frame = +1

Query: 226 LPDHLLELVVERLC-LPDLFSFGRVCKPWRSVCD--PSQFQNHLPWLIVPSITNSNSDSM 396
           LP  LL+ + ++     D  S   VCK W S     P      LPWL++P   N+ +   
Sbjct: 7   LPQELLQTITQKQSNYVDYISTRAVCKSWWSAIPKKPHDLLCQLPWLLLPYHKNNPNHR- 65

Query: 397 AFETETAGFYSLRDGKIYKAELPELSNRRICGSFSGGWLMTVHENSEIQLFNPFIASSII 576
                  GFY+L DGK Y  ELPE   +R CGS S GWL+ V +   I L NP +  + I
Sbjct: 66  -------GFYNLADGKTYHLELPETIEKRCCGS-SHGWLVMVEDTPSIFLLNP-LTKARI 116

Query: 577 HLPPLTKFP 603
            LP L+ FP
Sbjct: 117 ELPSLSTFP 125


>emb|CAN63667.1| hypothetical protein VITISV_013184 [Vitis vinifera]
          Length = 530

 Score = 74.7 bits (182), Expect = 2e-11
 Identities = 52/137 (37%), Positives = 68/137 (49%), Gaps = 13/137 (9%)
 Frame = +1

Query: 226 LPDHLLELVVERLC-LPDLFSFGRVCKPWRSVCDPSQFQN------------HLPWLIVP 366
           LPD LLE ++  L  + D   FG VC PW S+   S FQ              LPWL+V 
Sbjct: 136 LPDDLLEPILNNLASIVDSIRFGAVCTPWHSLAVKS-FQRLPVNQRPHLQPPPLPWLMVL 194

Query: 367 SITNSNSDSMAFETETAGFYSLRDGKIYKAELPELSNRRICGSFSGGWLMTVHENSEIQL 546
           S  NS         ++  FYS+   K+ K  LP     R CGS S GWL+T  E + + L
Sbjct: 195 SKPNSK--------DSRSFYSITHQKLSKFHLPVPPGTRYCGS-SHGWLITTDETNAVSL 245

Query: 547 FNPFIASSIIHLPPLTK 597
            +PF +  +I LPPLT+
Sbjct: 246 LHPF-SRQVIRLPPLTR 261


>ref|NP_001168586.1| uncharacterized protein LOC100382370 [Zea mays]
           gi|223949381|gb|ACN28774.1| unknown [Zea mays]
           gi|413943184|gb|AFW75833.1| hypothetical protein
           ZEAMMB73_857643 [Zea mays]
          Length = 460

 Score = 73.6 bits (179), Expect = 4e-11
 Identities = 50/135 (37%), Positives = 70/135 (51%), Gaps = 7/135 (5%)
 Frame = +1

Query: 226 LPDHLLELVVERLCLPDLFSFGRVCKPWRSVCDPS-----QFQNHLPWLIVPSITNSNSD 390
           LP  LLE V+ RL +PDL  F  VC  W+SV   +     Q     PWL++P    + + 
Sbjct: 13  LPRDLLESVLARLPVPDLVRFPAVCTAWQSVHAAAAARLRQATPSSPWLMLPFNPTARAG 72

Query: 391 SMAFETETAGFYSLRDGKIYKAELPELSNR-RIC-GSFSGGWLMTVHENSEIQLFNPFIA 564
            +A +   A F SL +G++Y    P  + R R+C GS + GWL+T    SE+ L NP I 
Sbjct: 73  GVA-KLSVARFLSLAEGRVYVIRQPAPAARDRLCVGSSADGWLVTADARSELSLLNP-IT 130

Query: 565 SSIIHLPPLTKFPRV 609
            + + LPP    P V
Sbjct: 131 GAQLRLPPAATLPFV 145


>ref|XP_002510609.1| conserved hypothetical protein [Ricinus communis]
           gi|223551310|gb|EEF52796.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 406

 Score = 72.4 bits (176), Expect = 8e-11
 Identities = 48/129 (37%), Positives = 64/129 (49%), Gaps = 3/129 (2%)
 Frame = +1

Query: 226 LPDHLLELVVERLC-LPDLFSFGRVCKPWRSVCD--PSQFQNHLPWLIVPSITNSNSDSM 396
           LP  LL+ + ++     D  S   VCK W S     P      LPWL++P   ++ +   
Sbjct: 7   LPQELLQTITQKQTNYVDYISTRAVCKSWWSAIPKKPHDLLCRLPWLLLPHHKDNPNHR- 65

Query: 397 AFETETAGFYSLRDGKIYKAELPELSNRRICGSFSGGWLMTVHENSEIQLFNPFIASSII 576
                  GFY+  DGK Y  ELPE  ++R CGS S GWL+ V +   I L NP +  S I
Sbjct: 66  -------GFYNPSDGKTYHLELPETVDKRCCGS-SHGWLVMVEDTPSIFLLNP-LTKSRI 116

Query: 577 HLPPLTKFP 603
            LP L+ FP
Sbjct: 117 ELPSLSTFP 125


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