BLASTX nr result

ID: Cimicifuga21_contig00008865 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00008865
         (1771 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002310964.1| white-brown-complex ABC transporter family [...   416   e-114
ref|XP_002523637.1| abc transporter, putative [Ricinus communis]...   416   e-113
ref|XP_002267203.1| PREDICTED: ABC transporter I family member 6...   414   e-113
ref|XP_004146320.1| PREDICTED: ABC transporter I family member 6...   412   e-112
gb|AAM61568.1| putative ABC transporter ATPase [Arabidopsis thal...   404   e-110

>ref|XP_002310964.1| white-brown-complex ABC transporter family [Populus trichocarpa]
            gi|222850784|gb|EEE88331.1| white-brown-complex ABC
            transporter family [Populus trichocarpa]
          Length = 327

 Score =  416 bits (1070), Expect = e-114
 Identities = 216/303 (71%), Positives = 255/303 (84%), Gaps = 1/303 (0%)
 Frame = -3

Query: 1238 PSNSTIFTIPALRPLPSSSRFNHLRQYLTIKSSL-TVDLPTTSAKDNGGETSKILLEVKG 1062
            P NS +FT  A R L    R    R+   + +S+  V+   T+  D+G +  + LLEVK 
Sbjct: 31   PLNSNLFTYSATRSL----RLRSTRRLPAVTASVPAVETTGTTGTDSGKK--RPLLEVKD 84

Query: 1061 LTAVIKESKQQILKGVNLVMREGEVHAVMGKNGSGKSTFSKVLAGHPDYEVTGGSVTFKG 882
            LTAVI ESKQ+ILKGVN+V+ EGEVHA+MGKNGSGKSTFSKVLAGHPDYEVTGGSV FKG
Sbjct: 85   LTAVIAESKQEILKGVNVVLYEGEVHAIMGKNGSGKSTFSKVLAGHPDYEVTGGSVVFKG 144

Query: 881  ENLLDMDPEERSLAGLFMSFQSPVEIPGVSNMDFLHMAYNARQQKLGLPEVDPIKFFSVV 702
            ENLLDM+PEERSLAGLFMSFQSPVEIPGV+N+DFL+MAYNAR++KLGLPE+ PI+F++ +
Sbjct: 145  ENLLDMEPEERSLAGLFMSFQSPVEIPGVNNIDFLNMAYNARRRKLGLPELGPIEFYAYL 204

Query: 701  NPKRELLKMDQTFLNRNVNEGFSGGERKRNEILQLAVLGADVAILDEIDSGLDVDALEDV 522
             PK EL+ M   FLNRNVNEGFSGGERKRNEILQLAVLGA++AILDEIDSGLD+DAL+DV
Sbjct: 205  FPKLELVNMKSDFLNRNVNEGFSGGERKRNEILQLAVLGAELAILDEIDSGLDIDALQDV 264

Query: 521  AQAVNALLTPKNSVIMVTHYQRLLEYIKPKYVHIMEDGRIIKTGDISTAKLLEKEGYKAI 342
            A+AVN +LTP N+V+M+THY RLLE+IKP  +HIME+GRI+KTGDIS AK LEKEGYKAI
Sbjct: 265  AKAVNGMLTPNNAVLMITHYLRLLEFIKPTCIHIMENGRIVKTGDISIAKTLEKEGYKAI 324

Query: 341  SAS 333
            SAS
Sbjct: 325  SAS 327


>ref|XP_002523637.1| abc transporter, putative [Ricinus communis]
            gi|223537089|gb|EEF38723.1| abc transporter, putative
            [Ricinus communis]
          Length = 326

 Score =  416 bits (1068), Expect = e-113
 Identities = 222/329 (67%), Positives = 262/329 (79%), Gaps = 5/329 (1%)
 Frame = -3

Query: 1304 SLHLQTPFASYPSSRQSDFKASPSNSTIFTIPALRPLPSSSRFNHLRQYL-----TIKSS 1140
            +LHL     S PS +   FK+S  +  + T PA   L   S  N  R+        + ++
Sbjct: 3    ALHLSFLSQSPPSLQ---FKSSSLDLQLSTYPAAPTLRFPSIHNRRRRCCWRSLHLVNAT 59

Query: 1139 LTVDLPTTSAKDNGGETSKILLEVKGLTAVIKESKQQILKGVNLVMREGEVHAVMGKNGS 960
            L+  + T     +  +T   LLEVK LTAVI ESKQ+ILKGVNLV+ EGEVHAVMGKNGS
Sbjct: 60   LSAAVETIDGTASREKTP--LLEVKDLTAVIAESKQEILKGVNLVVHEGEVHAVMGKNGS 117

Query: 959  GKSTFSKVLAGHPDYEVTGGSVTFKGENLLDMDPEERSLAGLFMSFQSPVEIPGVSNMDF 780
            GKSTFSKVL GHPDYEVTGGSV FKGENLLDM+PEERSLAGLFMSFQSPVEIPGV+N+DF
Sbjct: 118  GKSTFSKVLVGHPDYEVTGGSVVFKGENLLDMEPEERSLAGLFMSFQSPVEIPGVNNIDF 177

Query: 779  LHMAYNARQQKLGLPEVDPIKFFSVVNPKRELLKMDQTFLNRNVNEGFSGGERKRNEILQ 600
            L+MAYNAR++KLGLPE+ PI+F++ + PK EL+ M   FLNRNVNEGFSGGE+KRNEILQ
Sbjct: 178  LNMAYNARRKKLGLPELGPIEFYAYLFPKLELVNMKSDFLNRNVNEGFSGGEKKRNEILQ 237

Query: 599  LAVLGADVAILDEIDSGLDVDALEDVAQAVNALLTPKNSVIMVTHYQRLLEYIKPKYVHI 420
            LAVLGAD+AILDEIDSGLD+DAL+DVA+AVN +LTPKNSV+M+THY RLLE+I P Y+HI
Sbjct: 238  LAVLGADLAILDEIDSGLDIDALKDVAKAVNGILTPKNSVLMITHYLRLLEFIHPTYIHI 297

Query: 419  MEDGRIIKTGDISTAKLLEKEGYKAISAS 333
            MEDGRI+KTGDIS AK+LEKEGYKAI+ S
Sbjct: 298  MEDGRIVKTGDISIAKVLEKEGYKAITPS 326


>ref|XP_002267203.1| PREDICTED: ABC transporter I family member 6, chloroplastic [Vitis
            vinifera] gi|296087808|emb|CBI35064.3| unnamed protein
            product [Vitis vinifera]
          Length = 321

 Score =  414 bits (1065), Expect = e-113
 Identities = 217/304 (71%), Positives = 250/304 (82%), Gaps = 3/304 (0%)
 Frame = -3

Query: 1241 SPSNSTIFTIPALRPLPSSSRFNHLRQYLTIKSSLTVDLPTTSAKDNGGETS---KILLE 1071
            S SN   FT  A R L        +R       SLT  L T  + +  G  S   K+LLE
Sbjct: 21   SSSNFRAFTCSATRLLS-------IRTPSRRPLSLTATLATVHSAEASGVDSRDKKLLLE 73

Query: 1070 VKGLTAVIKESKQQILKGVNLVMREGEVHAVMGKNGSGKSTFSKVLAGHPDYEVTGGSVT 891
            VK LTAVI ESKQQILKGVNLV+ EGEVHAVMGKNGSGKSTFSKVL GHPDYEVTGG+V 
Sbjct: 74   VKDLTAVISESKQQILKGVNLVVYEGEVHAVMGKNGSGKSTFSKVLVGHPDYEVTGGTVV 133

Query: 890  FKGENLLDMDPEERSLAGLFMSFQSPVEIPGVSNMDFLHMAYNARQQKLGLPEVDPIKFF 711
            FKGENLLDMDPEER+LAGLFMSFQSPVEIPGVSN+DFL+MAYNA+++KLGLPE+ PI+F+
Sbjct: 134  FKGENLLDMDPEERALAGLFMSFQSPVEIPGVSNIDFLNMAYNAQRRKLGLPELGPIEFY 193

Query: 710  SVVNPKRELLKMDQTFLNRNVNEGFSGGERKRNEILQLAVLGADVAILDEIDSGLDVDAL 531
              ++PK +++ M   FLNRNVNEGFSGGERKRNEILQLAVLGAD+AILDEIDSGLD+DAL
Sbjct: 194  GYISPKLDIVNMKIDFLNRNVNEGFSGGERKRNEILQLAVLGADLAILDEIDSGLDIDAL 253

Query: 530  EDVAQAVNALLTPKNSVIMVTHYQRLLEYIKPKYVHIMEDGRIIKTGDISTAKLLEKEGY 351
            +DVA+AVN LLTP NSV+++THY RLLE+IKP Y+H+MEDGRI+KTGDIS AK+LE+EGY
Sbjct: 254  KDVAKAVNGLLTPVNSVLIITHYLRLLEFIKPTYIHVMEDGRIVKTGDISIAKVLEEEGY 313

Query: 350  KAIS 339
            KAIS
Sbjct: 314  KAIS 317


>ref|XP_004146320.1| PREDICTED: ABC transporter I family member 6, chloroplastic-like
            [Cucumis sativus] gi|449523329|ref|XP_004168676.1|
            PREDICTED: ABC transporter I family member 6,
            chloroplastic-like [Cucumis sativus]
          Length = 329

 Score =  412 bits (1058), Expect = e-112
 Identities = 216/317 (68%), Positives = 258/317 (81%), Gaps = 1/317 (0%)
 Frame = -3

Query: 1280 ASYPSSRQSDFKASPSNSTIFTIPALRPLPSSSRFNHLRQYLTIKSSLT-VDLPTTSAKD 1104
            +S+ +S  S     PSNST+  +     LP   RFN  R      +SL+ V+ P+TS  D
Sbjct: 18   SSFTTSTTSLVPYLPSNSTLSMMTTFSHLPF--RFNLRRSVRIATASLSAVNSPSTSFSD 75

Query: 1103 NGGETSKILLEVKGLTAVIKESKQQILKGVNLVMREGEVHAVMGKNGSGKSTFSKVLAGH 924
            +      +LLEVK LTAVI E+KQ+ILKGVNLV+ EGEVHA+MGKNGSGKSTF+KVL GH
Sbjct: 76   S---QKSLLLEVKDLTAVIAETKQEILKGVNLVVYEGEVHAIMGKNGSGKSTFAKVLVGH 132

Query: 923  PDYEVTGGSVTFKGENLLDMDPEERSLAGLFMSFQSPVEIPGVSNMDFLHMAYNARQQKL 744
            PDYEVTGGS+ FKG +LL+M+PEERSLAGLFMSFQSPVEIPGVSN+DFL+MAYNAR++KL
Sbjct: 133  PDYEVTGGSIVFKGSDLLEMEPEERSLAGLFMSFQSPVEIPGVSNIDFLNMAYNARRRKL 192

Query: 743  GLPEVDPIKFFSVVNPKRELLKMDQTFLNRNVNEGFSGGERKRNEILQLAVLGADVAILD 564
            GL E+ PI+F++ + PK +L+ M   FLNRNVNEGFSGGERKRNEILQLAVLGA++AILD
Sbjct: 193  GLAELGPIEFYAYIFPKLDLVNMKTDFLNRNVNEGFSGGERKRNEILQLAVLGAEMAILD 252

Query: 563  EIDSGLDVDALEDVAQAVNALLTPKNSVIMVTHYQRLLEYIKPKYVHIMEDGRIIKTGDI 384
            EIDSGLDVDAL DVA+AVN LLTP NSV+M+THY RLLE+IKP  +H+MEDG+I+KTGDI
Sbjct: 253  EIDSGLDVDALRDVAKAVNGLLTPNNSVLMITHYLRLLEFIKPSRIHVMEDGKIVKTGDI 312

Query: 383  STAKLLEKEGYKAISAS 333
            S AKLLE+EGYKAIS S
Sbjct: 313  SIAKLLEEEGYKAISTS 329


>gb|AAM61568.1| putative ABC transporter ATPase [Arabidopsis thaliana]
          Length = 338

 Score =  404 bits (1037), Expect = e-110
 Identities = 216/331 (65%), Positives = 263/331 (79%), Gaps = 7/331 (2%)
 Frame = -3

Query: 1310 AFSLHLQTPFASYPS---SRQSDFKASPSNSTIFTI---PALRPLPSSSRFNHLRQYLTI 1149
            A+S+    P  S+P    +++     SPS   +  +    A  P+  ++R    R  +  
Sbjct: 11   AYSIAQFVPTVSFPPPLPTQRVRLGTSPSRVLLCNLRANSAAAPILRTTR----RSVIVS 66

Query: 1148 KSSLTVDLPTTSAKDNGGETSKI-LLEVKGLTAVIKESKQQILKGVNLVMREGEVHAVMG 972
             SS++  + + S  ++  +  +I LLEV+ L AVI ES+Q+ILKGVNLV+ EGEVHAVMG
Sbjct: 67   ASSVSSAVDSDSLVEDRDDVGRIPLLEVRDLRAVIAESRQEILKGVNLVVYEGEVHAVMG 126

Query: 971  KNGSGKSTFSKVLAGHPDYEVTGGSVTFKGENLLDMDPEERSLAGLFMSFQSPVEIPGVS 792
            KNGSGKSTFSKVL GHPDYEVTGGS+ FKG+NLLDM+PE+RSLAGLFMSFQSPVEIPGVS
Sbjct: 127  KNGSGKSTFSKVLVGHPDYEVTGGSIVFKGQNLLDMEPEDRSLAGLFMSFQSPVEIPGVS 186

Query: 791  NMDFLHMAYNARQQKLGLPEVDPIKFFSVVNPKRELLKMDQTFLNRNVNEGFSGGERKRN 612
            NMDFL+MA+NAR++KLG PE+DPI+F+S +  K E++ M   FLNRNVNEGFSGGERKRN
Sbjct: 187  NMDFLNMAFNARKRKLGQPELDPIQFYSHLVSKLEVVNMKTDFLNRNVNEGFSGGERKRN 246

Query: 611  EILQLAVLGADVAILDEIDSGLDVDALEDVAQAVNALLTPKNSVIMVTHYQRLLEYIKPK 432
            EILQLAVLGA++AILDEIDSGLDVDAL+DVA+AVN LLTPKNSV+M+THYQRLL+YIKP 
Sbjct: 247  EILQLAVLGAELAILDEIDSGLDVDALQDVAKAVNGLLTPKNSVLMITHYQRLLDYIKPT 306

Query: 431  YVHIMEDGRIIKTGDISTAKLLEKEGYKAIS 339
             +HIME+GRIIKTGD S AKLLEKEGYKAIS
Sbjct: 307  LIHIMENGRIIKTGDNSLAKLLEKEGYKAIS 337


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