BLASTX nr result

ID: Cimicifuga21_contig00008863 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00008863
         (213 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AFK44003.1| unknown [Medicago truncatula]                           66   3e-09
ref|XP_003638664.1| RING finger protein [Medicago truncatula] gi...    66   3e-09
ref|XP_003636983.1| RING finger protein [Medicago truncatula] gi...    66   3e-09
ref|XP_003626572.1| RING-H2 finger protein ATL1E [Medicago trunc...    66   3e-09
ref|XP_003526340.1| PREDICTED: putative RING-H2 finger protein A...    64   1e-08

>gb|AFK44003.1| unknown [Medicago truncatula]
          Length = 371

 Score = 65.9 bits (159), Expect = 3e-09
 Identities = 25/29 (86%), Positives = 26/29 (89%)
 Frame = -3

Query: 211 PACKHCFHAACIDEWLRRNVTCPLCRNSP 125
           P CKHCFHA CIDEWLR NVTCP+CRNSP
Sbjct: 331 PECKHCFHADCIDEWLRMNVTCPVCRNSP 359


>ref|XP_003638664.1| RING finger protein [Medicago truncatula]
           gi|355504599|gb|AES85802.1| RING finger protein
           [Medicago truncatula]
          Length = 371

 Score = 65.9 bits (159), Expect = 3e-09
 Identities = 25/29 (86%), Positives = 26/29 (89%)
 Frame = -3

Query: 211 PACKHCFHAACIDEWLRRNVTCPLCRNSP 125
           P CKHCFHA CIDEWLR NVTCP+CRNSP
Sbjct: 331 PECKHCFHADCIDEWLRMNVTCPVCRNSP 359


>ref|XP_003636983.1| RING finger protein [Medicago truncatula]
           gi|355502918|gb|AES84121.1| RING finger protein
           [Medicago truncatula]
          Length = 222

 Score = 65.9 bits (159), Expect = 3e-09
 Identities = 25/29 (86%), Positives = 26/29 (89%)
 Frame = -3

Query: 211 PACKHCFHAACIDEWLRRNVTCPLCRNSP 125
           P CKHCFHA CIDEWLR NVTCP+CRNSP
Sbjct: 182 PECKHCFHADCIDEWLRMNVTCPVCRNSP 210


>ref|XP_003626572.1| RING-H2 finger protein ATL1E [Medicago truncatula]
           gi|355501587|gb|AES82790.1| RING-H2 finger protein ATL1E
           [Medicago truncatula]
          Length = 370

 Score = 65.9 bits (159), Expect = 3e-09
 Identities = 25/33 (75%), Positives = 26/33 (78%)
 Frame = -3

Query: 211 PACKHCFHAACIDEWLRRNVTCPLCRNSPLLPH 113
           P CKHCFHA CIDEWLR N TCP+CRNSP   H
Sbjct: 331 PECKHCFHAHCIDEWLRMNATCPVCRNSPFPSH 363


>ref|XP_003526340.1| PREDICTED: putative RING-H2 finger protein ATL69-like [Glycine max]
          Length = 185

 Score = 64.3 bits (155), Expect = 1e-08
 Identities = 26/38 (68%), Positives = 30/38 (78%), Gaps = 3/38 (7%)
 Frame = -3

Query: 211 PACKHCFHAACIDEWLRRNVTCPLCRNSPL---LPHPA 107
           P C+HCFHA CIDEWL+ + TCPLCRNSP+   LP PA
Sbjct: 133 PECRHCFHAECIDEWLKMSATCPLCRNSPVPSPLPTPA 170


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