BLASTX nr result

ID: Cimicifuga21_contig00008832 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00008832
         (328 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI23132.3| unnamed protein product [Vitis vinifera]              104   9e-21
ref|XP_002268823.1| PREDICTED: probable LRR receptor-like serine...   104   9e-21
emb|CAN63094.1| hypothetical protein VITISV_020143 [Vitis vinifera]   104   9e-21
emb|CAN83822.1| hypothetical protein VITISV_030954 [Vitis vinifera]   103   1e-20
ref|XP_002311065.1| predicted protein [Populus trichocarpa] gi|2...   102   2e-20

>emb|CBI23132.3| unnamed protein product [Vitis vinifera]
          Length = 677

 Score =  104 bits (259), Expect = 9e-21
 Identities = 57/99 (57%), Positives = 67/99 (67%), Gaps = 1/99 (1%)
 Frame = +3

Query: 33  MKSYRFSLVQSILLFCISLAAVRTSTAHILGNETDRLALLAFKDQIIQDPKGFMSSWNDS 212
           MK++  S +   +L CI L   R  TA  + NETDRLAL+AFKD I QDP G +SSWNDS
Sbjct: 1   MKAFVSSFLLYTVLLCIHLW--RPVTASSMQNETDRLALIAFKDGITQDPLGMLSSWNDS 58

Query: 213 LRVCDWRGVTCGLRH-RRVITLNLDSHGLVGSISPYIGN 326
           L  C W GV C  RH  RV  LNL S+GLVGS+SP+IGN
Sbjct: 59  LHFCRWSGVYCSRRHVHRVTKLNLFSYGLVGSLSPHIGN 97


>ref|XP_002268823.1| PREDICTED: probable LRR receptor-like serine/threonine-protein
           kinase At3g47570 [Vitis vinifera]
          Length = 1009

 Score =  104 bits (259), Expect = 9e-21
 Identities = 57/99 (57%), Positives = 67/99 (67%), Gaps = 1/99 (1%)
 Frame = +3

Query: 33  MKSYRFSLVQSILLFCISLAAVRTSTAHILGNETDRLALLAFKDQIIQDPKGFMSSWNDS 212
           MK++  S +   +L CI L   R  TA  + NETDRLAL+AFKD I QDP G +SSWNDS
Sbjct: 1   MKAFVSSFLLYTVLLCIHLW--RPVTASSMQNETDRLALIAFKDGITQDPLGMLSSWNDS 58

Query: 213 LRVCDWRGVTCGLRH-RRVITLNLDSHGLVGSISPYIGN 326
           L  C W GV C  RH  RV  LNL S+GLVGS+SP+IGN
Sbjct: 59  LHFCRWSGVYCSRRHVHRVTKLNLFSYGLVGSLSPHIGN 97


>emb|CAN63094.1| hypothetical protein VITISV_020143 [Vitis vinifera]
          Length = 1009

 Score =  104 bits (259), Expect = 9e-21
 Identities = 57/99 (57%), Positives = 67/99 (67%), Gaps = 1/99 (1%)
 Frame = +3

Query: 33  MKSYRFSLVQSILLFCISLAAVRTSTAHILGNETDRLALLAFKDQIIQDPKGFMSSWNDS 212
           MK++  S +   +L CI L   R  TA  + NETDRLAL+AFKD I QDP G +SSWNDS
Sbjct: 1   MKAFVSSFLLYTVLLCIHLW--RPVTASSMQNETDRLALIAFKDGITQDPLGMLSSWNDS 58

Query: 213 LRVCDWRGVTCGLRH-RRVITLNLDSHGLVGSISPYIGN 326
           L  C W GV C  RH  RV  LNL S+GLVGS+SP+IGN
Sbjct: 59  LHFCRWSGVYCSRRHVHRVTKLNLFSYGLVGSLSPHIGN 97


>emb|CAN83822.1| hypothetical protein VITISV_030954 [Vitis vinifera]
          Length = 1904

 Score =  103 bits (257), Expect = 1e-20
 Identities = 57/109 (52%), Positives = 70/109 (64%), Gaps = 4/109 (3%)
 Frame = +3

Query: 12  SLTKFMMMKSYRFSLVQSIL----LFCISLAAVRTSTAHILGNETDRLALLAFKDQIIQD 179
           SL K   +  +R  +  SIL    +  +   +  TS+  + GNETDRLALLA K QI QD
Sbjct: 26  SLFKTNTLIPFRSFIFHSILVPYTIIFLHSPSPTTSSTILYGNETDRLALLAIKAQITQD 85

Query: 180 PKGFMSSWNDSLRVCDWRGVTCGLRHRRVITLNLDSHGLVGSISPYIGN 326
           P G  +SWNDS+  C+W GVTCG RH+RV TLNL S  LVGS+SP IGN
Sbjct: 86  PLGITTSWNDSVHFCNWTGVTCGHRHQRVNTLNLSSLHLVGSLSPSIGN 134



 Score = 68.9 bits (167), Expect = 4e-10
 Identities = 33/53 (62%), Positives = 36/53 (67%)
 Frame = +3

Query: 168  IIQDPKGFMSSWNDSLRVCDWRGVTCGLRHRRVITLNLDSHGLVGSISPYIGN 326
            I   P   MSSWNDSL  C W+GV+C  RH+RV  LNL S GLVGSI P IGN
Sbjct: 1064 ITDAPLRAMSSWNDSLHFCQWQGVSCSGRHQRVTVLNLHSLGLVGSIPPLIGN 1116


>ref|XP_002311065.1| predicted protein [Populus trichocarpa] gi|222850885|gb|EEE88432.1|
           predicted protein [Populus trichocarpa]
          Length = 1032

 Score =  102 bits (255), Expect = 2e-20
 Identities = 47/69 (68%), Positives = 57/69 (82%)
 Frame = +3

Query: 120 LGNETDRLALLAFKDQIIQDPKGFMSSWNDSLRVCDWRGVTCGLRHRRVITLNLDSHGLV 299
           +GNETDRL+LLAFKDQI  DP G +SSWNDS   C+W GVTCG RH+RV+ L+L+S  LV
Sbjct: 29  IGNETDRLSLLAFKDQIEADPLGTLSSWNDSSHFCEWSGVTCGRRHQRVVELDLNSCKLV 88

Query: 300 GSISPYIGN 326
           GS+SP+IGN
Sbjct: 89  GSLSPHIGN 97


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