BLASTX nr result

ID: Cimicifuga21_contig00008830 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00008830
         (1279 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002282696.1| PREDICTED: IST1 homolog [Vitis vinifera] gi|...   334   3e-89
gb|ABK94695.1| unknown [Populus trichocarpa]                          314   3e-83
ref|XP_003555907.1| PREDICTED: IST1 homolog [Glycine max]             308   1e-81
gb|AFK46378.1| unknown [Medicago truncatula]                          306   7e-81
ref|XP_002533970.1| protein with unknown function [Ricinus commu...   305   1e-80

>ref|XP_002282696.1| PREDICTED: IST1 homolog [Vitis vinifera]
           gi|297737811|emb|CBI27012.3| unnamed protein product
           [Vitis vinifera]
          Length = 329

 Score =  334 bits (857), Expect = 3e-89
 Identities = 176/292 (60%), Positives = 225/292 (77%)
 Frame = +1

Query: 106 MSLLNQLFSRGLLGAKCKTCLNLAISRIXXXXXXXXXXXXXMRKEIAQYLRTGQDAIARI 285
           MSLLNQLF+RG+LGAKCKTCLNLAISRI             MRKEIAQ+L+TGQ+AIARI
Sbjct: 1   MSLLNQLFNRGILGAKCKTCLNLAISRIKLLQNKRSLHLKQMRKEIAQFLQTGQEAIARI 60

Query: 286 RVEHVIREMNMQAAYDILEMFCEFIYARVPMLESQRDCPRELQEAIASIIFAAPRCSDLP 465
           RVEHVIRE N+ AAY+ILE+FCEF+ ARVP+LE+QR+CP EL+EA+ASIIFAAPRCSD+P
Sbjct: 61  RVEHVIREQNIWAAYEILELFCEFVLARVPILETQRECPTELREAVASIIFAAPRCSDVP 120

Query: 466 ELLQTRNLFIAKYGKEFTSAASELRPDSSVNRAIIEKLSVNAPSAEAKLSLLKEIAREYN 645
           +LLQ +NLF AKYGKEF  AASELRPD+SVNRAIIEKLSV+ P+ EAKL  LKEIA+EYN
Sbjct: 121 DLLQIKNLFAAKYGKEFILAASELRPDTSVNRAIIEKLSVSTPTGEAKLKQLKEIAQEYN 180

Query: 646 LEWDASSTEAEFRKKHEDLLDGSNKIRNGAADSRVPTTRGSHDSSVSSERHPIVSADQNR 825
           LEWD+S+TEAEF KKHEDLLDGS ++ +G A S+ P+ + S     +SE + I S    +
Sbjct: 181 LEWDSSNTEAEFSKKHEDLLDGSKQVCSGGAISQAPSIQSSLQCPPTSEPNVISSRTIQQ 240

Query: 826 RSQNLESAHVGIRNGSMAIPDKDEGLVGNHTEGVMPEAKTKTSSQASNAMDK 981
             Q L S +   +  S++ PD+ E  + ++  G + ++K +T SQ+S+ +++
Sbjct: 241 GIQALHSPNTASKK-SLSSPDEVEHSIKSYNAGQVSDSK-ETRSQSSDILER 290


>gb|ABK94695.1| unknown [Populus trichocarpa]
          Length = 314

 Score =  314 bits (805), Expect = 3e-83
 Identities = 166/292 (56%), Positives = 216/292 (73%)
 Frame = +1

Query: 106 MSLLNQLFSRGLLGAKCKTCLNLAISRIXXXXXXXXXXXXXMRKEIAQYLRTGQDAIARI 285
           MSLLNQLF+RG+ G+KCKTCLNLAISRI             MRKEIAQ+L+ GQ+AIARI
Sbjct: 1   MSLLNQLFNRGVFGSKCKTCLNLAISRIKLLQNKRDLQLKHMRKEIAQFLQAGQEAIARI 60

Query: 286 RVEHVIREMNMQAAYDILEMFCEFIYARVPMLESQRDCPRELQEAIASIIFAAPRCSDLP 465
           RVEHVIRE N++AAY+ILE+FCEF+  RVP+LESQ++CP EL+EAIASIIFAAPRCS++P
Sbjct: 61  RVEHVIREQNIRAAYEILELFCEFVLVRVPILESQKECPAELREAIASIIFAAPRCSEVP 120

Query: 466 ELLQTRNLFIAKYGKEFTSAASELRPDSSVNRAIIEKLSVNAPSAEAKLSLLKEIAREYN 645
           +LLQ +NLF AKYGKEF  AASELRPDS VNRAIIE+LSV AP AEA+L +LKEIA+E++
Sbjct: 121 DLLQIKNLFAAKYGKEFNMAASELRPDSGVNRAIIERLSVRAPPAEARLKVLKEIAQEFS 180

Query: 646 LEWDASSTEAEFRKKHEDLLDGSNKIRNGAADSRVPTTRGSHDSSVSSERHPIVSADQNR 825
           LEWD+S+TEAE  KKHEDLL GS +I   A   + PT + S  S  S+  H  ++ D  +
Sbjct: 181 LEWDSSNTEAELGKKHEDLLGGSKEIMADAILPQAPTKQNSPLSPPSNGAHSTLNTDNKQ 240

Query: 826 RSQNLESAHVGIRNGSMAIPDKDEGLVGNHTEGVMPEAKTKTSSQASNAMDK 981
            S  LE+  + + N      ++ E  + N+    M + + +T+SQ+S+ +++
Sbjct: 241 GSHRLEAPAL-VSNMPRVNANEIEPSIRNY----MADVQRETTSQSSDVLER 287


>ref|XP_003555907.1| PREDICTED: IST1 homolog [Glycine max]
          Length = 324

 Score =  308 bits (790), Expect = 1e-81
 Identities = 159/292 (54%), Positives = 205/292 (70%)
 Frame = +1

Query: 106 MSLLNQLFSRGLLGAKCKTCLNLAISRIXXXXXXXXXXXXXMRKEIAQYLRTGQDAIARI 285
           MSLLNQLF+RG+ G +CKTCLNLAISRI             M KEI+Q+L+ GQ+AIARI
Sbjct: 1   MSLLNQLFNRGVFGTRCKTCLNLAISRIKLLQNKRDMQLKQMCKEISQFLQAGQEAIARI 60

Query: 286 RVEHVIREMNMQAAYDILEMFCEFIYARVPMLESQRDCPRELQEAIASIIFAAPRCSDLP 465
           RVEH+IRE N  AAY+ILE+FCEF+ ARVP++E+QR+CP EL+EAIASIIFAAPRCSD+P
Sbjct: 61  RVEHIIREQNTWAAYEILELFCEFVLARVPIIENQRECPTELREAIASIIFAAPRCSDVP 120

Query: 466 ELLQTRNLFIAKYGKEFTSAASELRPDSSVNRAIIEKLSVNAPSAEAKLSLLKEIAREYN 645
           +LL  +NLF  KYGKEF SA SELRPDS VNR IIEKLSV+APS E KL +L+EIA EYN
Sbjct: 121 DLLHIKNLFTTKYGKEFVSAVSELRPDSGVNRTIIEKLSVSAPSGEVKLKVLREIAEEYN 180

Query: 646 LEWDASSTEAEFRKKHEDLLDGSNKIRNGAADSRVPTTRGSHDSSVSSERHPIVSADQNR 825
           + WD+S TEAEFRK HEDLL G+ ++  GA  S  P+  GS++ S       I      +
Sbjct: 181 IAWDSSKTEAEFRKNHEDLLGGAKQVSAGATLSHTPSRNGSNNPSPCITEPSIKPVQDKQ 240

Query: 826 RSQNLESAHVGIRNGSMAIPDKDEGLVGNHTEGVMPEAKTKTSSQASNAMDK 981
             ++LE+      N S+   + ++    N+      +AK++T  Q+S+ ++K
Sbjct: 241 EYKHLEAPSPSNNNSSLDTNEIEQSHKNNNVPA--GDAKSETRFQSSDVLEK 290


>gb|AFK46378.1| unknown [Medicago truncatula]
          Length = 326

 Score =  306 bits (784), Expect = 7e-81
 Identities = 158/292 (54%), Positives = 206/292 (70%)
 Frame = +1

Query: 106 MSLLNQLFSRGLLGAKCKTCLNLAISRIXXXXXXXXXXXXXMRKEIAQYLRTGQDAIARI 285
           MSLLNQLFSRG+   +CKTCLNLAISR+             MRKEI+Q+L+ GQ+ IARI
Sbjct: 1   MSLLNQLFSRGVFSTRCKTCLNLAISRMKLLQNKRDVQLKQMRKEISQFLQAGQEPIARI 60

Query: 286 RVEHVIREMNMQAAYDILEMFCEFIYARVPMLESQRDCPRELQEAIASIIFAAPRCSDLP 465
           RVEH+IRE N+ AAY+ILE+FCEF+ ARVP++ESQ++CP EL+EAIASIIFAAPRCSD+P
Sbjct: 61  RVEHIIREQNIWAAYEILELFCEFVLARVPIIESQKECPSELREAIASIIFAAPRCSDIP 120

Query: 466 ELLQTRNLFIAKYGKEFTSAASELRPDSSVNRAIIEKLSVNAPSAEAKLSLLKEIAREYN 645
           +LL  RNLF  KYGKEF +A SELRPDS VNR IIEKLSV+APS E KL +L +IA EYN
Sbjct: 121 DLLHIRNLFTTKYGKEFVTAISELRPDSGVNRTIIEKLSVSAPSGEIKLKVLTDIAEEYN 180

Query: 646 LEWDASSTEAEFRKKHEDLLDGSNKIRNGAADSRVPTTRGSHDSSVSSERHPIVSADQNR 825
           L WD+S+T AEFRK HEDLL G+ ++  GAA S  P+   S++ S S+    I S    +
Sbjct: 181 LAWDSSNTAAEFRKNHEDLLGGAKQVGVGAALSHAPSKNNSNNLSASNTEQSIKSTHDKQ 240

Query: 826 RSQNLESAHVGIRNGSMAIPDKDEGLVGNHTEGVMPEAKTKTSSQASNAMDK 981
           + + LE++     N  +   + ++    N  +    + KT+T  Q+S+ ++K
Sbjct: 241 QYEQLEASIPSNNNSWLNTKEIEQSHKNNDVQ--FNDTKTETIFQSSDILEK 290


>ref|XP_002533970.1| protein with unknown function [Ricinus communis]
           gi|223526053|gb|EEF28417.1| protein with unknown
           function [Ricinus communis]
          Length = 327

 Score =  305 bits (782), Expect = 1e-80
 Identities = 164/284 (57%), Positives = 204/284 (71%), Gaps = 2/284 (0%)
 Frame = +1

Query: 106 MSLLNQLFSRGLLGAKCKTCLNLAISRIXXXXXXXXXXXXXMRKEIAQYLRTGQDAIARI 285
           MSLLNQLF+RG+ GAKCKTCL L+ISRI             MRKEIAQ+L+ GQ+AIARI
Sbjct: 1   MSLLNQLFNRGVFGAKCKTCLTLSISRIKLLQNKRDLQLKHMRKEIAQFLQAGQEAIARI 60

Query: 286 RVEHVIREMNMQAAYDILEMFCEFIYARVPMLESQRDCPRELQEAIASIIFAAPRCSDLP 465
           RVEHVIRE N+ AAY+ILE+FCEF+ ARVP+LESQ++CP ELQEA+ASIIFAAPRCS++P
Sbjct: 61  RVEHVIREQNIWAAYEILELFCEFVLARVPILESQKECPFELQEAVASIIFAAPRCSEVP 120

Query: 466 ELLQTRNLFIAKYGKEFTSAASELRPDSSVNRAIIEKLSVNAPSAEAKLSLLKEIAREYN 645
           +LLQ +NLF  KYGKEF  AASELRPDS VNRAIIE+LSVNAP  EA+L +LKEIA EYN
Sbjct: 121 DLLQIKNLFTTKYGKEFVMAASELRPDSGVNRAIIERLSVNAPPGEARLKVLKEIAHEYN 180

Query: 646 LEWDASSTEAEFRKKHEDLLDGSNKIRNGAADSRVPTTRGSHDSSVSSERHPIVSAD--Q 819
           LEWD+S+TEAE  KKHEDLL GS +I    A S+ P  + S      +   PI+  D  Q
Sbjct: 181 LEWDSSNTEAELGKKHEDLLGGSKQIVAEGALSQAPMKQSSPKPPCLNGTSPIIDTDSKQ 240

Query: 820 NRRSQNLESAHVGIRNGSMAIPDKDEGLVGNHTEGVMPEAKTKT 951
              SQN+++      +   ++ ++ E  + + T     +AK +T
Sbjct: 241 GFVSQNVQAP--STISHLTSVDNEIEPSIRHQTTEAFTDAKRRT 282


Top