BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00008823
         (1343 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002283798.1| PREDICTED: nuclear pore complex protein Nup8...   535   e-150
ref|XP_002324219.1| predicted protein [Populus trichocarpa] gi|2...   479   e-133
ref|XP_002516506.1| conserved hypothetical protein [Ricinus comm...   463   e-128
ref|XP_003550123.1| PREDICTED: nuclear pore complex protein Nup8...   458   e-126
ref|NP_567908.1| uncharacterized protein [Arabidopsis thaliana] ...   458   e-126

>ref|XP_002283798.1| PREDICTED: nuclear pore complex protein Nup85 [Vitis vinifera]
            gi|296081842|emb|CBI20847.3| unnamed protein product
            [Vitis vinifera]
          Length = 715

 Score =  535 bits (1379), Expect = e-150
 Identities = 258/381 (67%), Positives = 312/381 (81%), Gaps = 1/381 (0%)
 Frame = -2

Query: 1276 MPGIMSENSNSIVPFSPEVRDPIVYHLHQTPPPPISHLSISWSHGNSLRVSFFRTTPSPE 1097
            MPG+ +++ N++VP SPE    +VY LH    PPIS LSISWS GN+LRVS FR  P+  
Sbjct: 1    MPGLTADSGNALVPLSPEAHVSVVYPLHHGLKPPISRLSISWSRGNALRVSVFRELPAES 60

Query: 1096 SVTTADETPNDEIGGKVVEVKLSSETGEIDEVQRRRIAYGSVSPFALLQSRKNSAAAFSN 917
            S +      + E GGKVV+VKL    GE+D+ Q RRIAYGSVSPFALLQSR+NS  A S 
Sbjct: 61   SDS------DGEAGGKVVQVKLGVADGEVDDAQWRRIAYGSVSPFALLQSRRNSVLALSK 114

Query: 916  MSMGSSN-RLDWWQHIMEYSKDINALLGNSKPPPSSVIEDPKEVLKTVGEATSVKAAWEL 740
            MSM SS    DWW+++MEYSKDI++LL N+K  P+S+I+DPK VLK V E T +KAAW L
Sbjct: 115  MSMSSSPYHPDWWEYVMEYSKDISSLLDNAKSLPNSMIDDPKTVLKKVEEPTCLKAAWGL 174

Query: 739  MEIFYADKQSQSWLPERLVDWLADYDTLFSPTSATVHSKLLDLQNELVNLQVIEDDPKYW 560
            +EIFYADK+SQ+WLPER+VDWLADYD LFS T ATVHSKL++ Q E+V LQVIEDDP+YW
Sbjct: 175  LEIFYADKESQAWLPERIVDWLADYDVLFSGTQATVHSKLVEFQKEIVRLQVIEDDPRYW 234

Query: 559  EGLSSALAVGWLEIVVKLLRMHGSYQLDQLGNRETENGLVEAVAVLVSKMPRMRSELDET 380
            E ++SALAVGWLEIVVKLLR+HGSYQLDQL NRETENGLVEAVA+L+SKMPRMR EL+  
Sbjct: 235  EVITSALAVGWLEIVVKLLRLHGSYQLDQLSNRETENGLVEAVAILISKMPRMRPELEAG 294

Query: 379  KLGECFKTKPEFLKSWEKWRWQIAKLECSAFWVECDHRQTREGLKKLLQIMLGNTNILSS 200
            +LGECFKTKP+F+K+WEKWR QI KL+CS+FWV+CDHRQTREGL+ +LQ+MLGNTN L +
Sbjct: 295  RLGECFKTKPDFIKAWEKWRAQITKLDCSSFWVQCDHRQTREGLRNMLQLMLGNTNNLCT 354

Query: 199  VTCHWMELYISNFLYIRPFTM 137
             TCHW+ELYIS+FLY+RPFT+
Sbjct: 355  STCHWIELYISHFLYVRPFTV 375


>ref|XP_002324219.1| predicted protein [Populus trichocarpa] gi|222865653|gb|EEF02784.1|
            predicted protein [Populus trichocarpa]
          Length = 720

 Score =  479 bits (1234), Expect = e-133
 Identities = 248/377 (65%), Positives = 285/377 (75%), Gaps = 2/377 (0%)
 Frame = -2

Query: 1261 SENSNSIVPFSPEVRDPIVYHLHQTPPPPISHLSISWSHGNSLRVSFFRTTPSPESVTTA 1082
            S ++  +VPF P+    +VY LH    PPIS +SISW+ GN+LRVS  R  PS       
Sbjct: 11   SASAGELVPFVPDTEIAVVYPLHHGLKPPISRVSISWARGNNLRVSLLRNPPS------- 63

Query: 1081 DETPNDEIGGKVVEVKLSSETGEIDE-VQRRRIAYGSVSPFALLQSRKNSAAAFSNM-SM 908
            +   + EIGGKVVEV L S   ++ E  Q RRIAYGSV+PFALLQSRKNSA+  S + S 
Sbjct: 64   NSDSDGEIGGKVVEVNLDSGAADVREPAQWRRIAYGSVTPFALLQSRKNSASILSKLQSS 123

Query: 907  GSSNRLDWWQHIMEYSKDINALLGNSKPPPSSVIEDPKEVLKTVGEATSVKAAWELMEIF 728
             S   LDW Q++MEYSKDI  LLGN K   + +IEDPKEVLK   E TS+KAAWELME+F
Sbjct: 124  PSPFHLDW-QYVMEYSKDIKELLGNPKSNYNPLIEDPKEVLKKGEEPTSLKAAWELMEMF 182

Query: 727  YADKQSQSWLPERLVDWLADYDTLFSPTSATVHSKLLDLQNELVNLQVIEDDPKYWEGLS 548
            YADK  QSWLPERLVDWLADYD L S     VHSKL++ Q  LV LQVIEDDPKYWE +S
Sbjct: 183  YADKLCQSWLPERLVDWLADYDCLLSGDQPAVHSKLVEFQGTLVTLQVIEDDPKYWEVIS 242

Query: 547  SALAVGWLEIVVKLLRMHGSYQLDQLGNRETENGLVEAVAVLVSKMPRMRSELDETKLGE 368
            SALAVGWLEIVVKLLR+HGSYQLDQ+  RETENGLVE VAVL+S MPRMR EL   KLGE
Sbjct: 243  SALAVGWLEIVVKLLRLHGSYQLDQISRRETENGLVETVAVLISMMPRMRPELKNGKLGE 302

Query: 367  CFKTKPEFLKSWEKWRWQIAKLECSAFWVECDHRQTREGLKKLLQIMLGNTNILSSVTCH 188
            CFK KP+F+K+WEKWR QI KL+ SAFWV CDHRQTREGLK L+QIMLGNT IL + T H
Sbjct: 303  CFKAKPDFMKAWEKWREQITKLDSSAFWVLCDHRQTREGLKNLIQIMLGNTEILCTATSH 362

Query: 187  WMELYISNFLYIRPFTM 137
            W+ELYIS+FL+IRPFT+
Sbjct: 363  WIELYISHFLFIRPFTV 379


>ref|XP_002516506.1| conserved hypothetical protein [Ricinus communis]
            gi|223544326|gb|EEF45847.1| conserved hypothetical
            protein [Ricinus communis]
          Length = 725

 Score =  463 bits (1191), Expect = e-128
 Identities = 235/391 (60%), Positives = 296/391 (75%), Gaps = 11/391 (2%)
 Frame = -2

Query: 1276 MPGIMSEN--------SNSIVPFSPEVRDPIVYHLHQTPPPPISHLSISWSHGNSLRVSF 1121
            MPG+ S +        SN +VP+ PE +  +VY L     PPIS +SIS++ GNSLR+S 
Sbjct: 1    MPGVPSASGGASDSISSNVLVPYLPESQVSVVYPLRHGLKPPISRVSISFARGNSLRISV 60

Query: 1120 FRTTPSPESVTTADETPNDEIGGKVVEVKLSSE-TGEIDEVQRRRIAYGSVSPFALLQSR 944
            FR   S       D   + EIGGKV+EVKL     GE+++   RRIAY SVSP+ALL+SR
Sbjct: 61   FRQPFS-------DSDTDSEIGGKVLEVKLGGNGDGELNDAYWRRIAYASVSPYALLKSR 113

Query: 943  KNSAAAFSNMSMGSSN-RLDWWQHIMEYSKDINALLGNSKPPPSS-VIEDPKEVLKTVGE 770
            +N A+  S + +  S   L+WW+++MEYSKDI++ L N K   +  VIEDPKE L+    
Sbjct: 114  RNCASNLSKLQLSPSPYHLEWWEYVMEYSKDISSFLVNPKSSTAGPVIEDPKEFLEKRER 173

Query: 769  ATSVKAAWELMEIFYADKQSQSWLPERLVDWLADYDTLFSPTSATVHSKLLDLQNELVNL 590
             T ++AAW+LMEIFYADK +QSW+PER+VDWL+DYD L S T  TV+ KL++ Q ELV L
Sbjct: 174  PTCLRAAWDLMEIFYADKLAQSWIPERMVDWLSDYDILLSSTQETVYMKLVEFQEELVTL 233

Query: 589  QVIEDDPKYWEGLSSALAVGWLEIVVKLLRMHGSYQLDQLGNRETENGLVEAVAVLVSKM 410
            QVIED+PK+WE +SSALAVGWLEI VK+LR+HGSYQLDQLG+RETENGLVEAVAVLVSKM
Sbjct: 234  QVIEDNPKFWEVISSALAVGWLEIAVKVLRLHGSYQLDQLGSRETENGLVEAVAVLVSKM 293

Query: 409  PRMRSELDETKLGECFKTKPEFLKSWEKWRWQIAKLECSAFWVECDHRQTREGLKKLLQI 230
            PR+R  L   KLGECFK KP+F+K+WE+WR Q+ KLE SAFWV+CDHR+TREGLK +LQI
Sbjct: 294  PRIRPGLTAGKLGECFKAKPDFMKAWERWRAQVTKLESSAFWVQCDHRRTREGLKNMLQI 353

Query: 229  MLGNTNILSSVTCHWMELYISNFLYIRPFTM 137
            MLGNTNILS++TC+W+E+YIS+ LYIRPFT+
Sbjct: 354  MLGNTNILSTMTCNWVEMYISHILYIRPFTV 384


>ref|XP_003550123.1| PREDICTED: nuclear pore complex protein Nup85-like [Glycine max]
          Length = 698

 Score =  458 bits (1179), Expect = e-126
 Identities = 228/370 (61%), Positives = 281/370 (75%)
 Frame = -2

Query: 1246 SIVPFSPEVRDPIVYHLHQTPPPPISHLSISWSHGNSLRVSFFRTTPSPESVTTADETPN 1067
            ++VPF+ +   P VY LH    PPIS LSISW+ G+SLR+S F    +            
Sbjct: 10   ALVPFTGD-SPPAVYPLHHGLAPPISRLSISWARGSSLRLSLFAGAAA------------ 56

Query: 1066 DEIGGKVVEVKLSSETGEIDEVQRRRIAYGSVSPFALLQSRKNSAAAFSNMSMGSSNRLD 887
                 KVVEVKL+ E  EI +   RRIAYGSV+PFALLQSR++S +A   +   S  R D
Sbjct: 57   -----KVVEVKLAGEDSEIPDAHWRRIAYGSVAPFALLQSRRSSLSAL--LKTPSPYRSD 109

Query: 886  WWQHIMEYSKDINALLGNSKPPPSSVIEDPKEVLKTVGEATSVKAAWELMEIFYADKQSQ 707
            WW+H+++YSK+I +LLG  K P S +IEDP  + K   E TS+KAAWEL+EIFY DKQSQ
Sbjct: 110  WWEHVLQYSKEIGSLLGGPKLPASPIIEDPNVIAKRGEEPTSLKAAWELIEIFYVDKQSQ 169

Query: 706  SWLPERLVDWLADYDTLFSPTSATVHSKLLDLQNELVNLQVIEDDPKYWEGLSSALAVGW 527
            +WLPERLVDWLADY +LF+ T  T+H KL+D Q ELVN+QVIE+DP+YW+ LSSAL+VGW
Sbjct: 170  AWLPERLVDWLADYASLFTSTHETIHGKLVDFQKELVNIQVIEEDPRYWDLLSSALSVGW 229

Query: 526  LEIVVKLLRMHGSYQLDQLGNRETENGLVEAVAVLVSKMPRMRSELDETKLGECFKTKPE 347
            L+IVVK+LR+HGSYQLDQL NRE ENGLVEAVAVL+SKMPRMR E    KLGEC+K+KP+
Sbjct: 230  LDIVVKMLRLHGSYQLDQLSNRELENGLVEAVAVLISKMPRMRPE-SVGKLGECYKSKPD 288

Query: 346  FLKSWEKWRWQIAKLECSAFWVECDHRQTREGLKKLLQIMLGNTNILSSVTCHWMELYIS 167
            F+K+WEKWR QI KL+CS FW++CD++QTREGL+ LLQIMLGNT  L   TC+W+ELYIS
Sbjct: 289  FIKAWEKWRSQITKLDCSRFWIQCDNQQTREGLRNLLQIMLGNTESLCMATCYWIELYIS 348

Query: 166  NFLYIRPFTM 137
            +FLYIRPFTM
Sbjct: 349  HFLYIRPFTM 358


>ref|NP_567908.1| uncharacterized protein [Arabidopsis thaliana]
            gi|75158853|sp|Q8RXH2.1|NUP85_ARATH RecName: Full=Nuclear
            pore complex protein Nup85; AltName: Full=Nucleoporin
            Nup85 gi|19698819|gb|AAL91145.1| putative protein
            [Arabidopsis thaliana] gi|332660742|gb|AEE86142.1|
            uncharacterized protein [Arabidopsis thaliana]
          Length = 716

 Score =  458 bits (1178), Expect = e-126
 Identities = 234/411 (56%), Positives = 302/411 (73%), Gaps = 8/411 (1%)
 Frame = -2

Query: 1276 MPGIMSENSNS-IVPFSPEVRDPIVYHLHQTPPPPISHLSISWSHGNSLRVSFFRTTPSP 1100
            MPG+ SE+    +V FS + + P++Y L      P+  LSISW  GN+LRV+  R   +P
Sbjct: 1    MPGMSSESGGGELVLFSTKEKTPVLYPLSYGLKSPVHRLSISWGCGNNLRVTVLR---NP 57

Query: 1099 ESVTTADETPNDEIGGKVVEVKLSSETGEIDEVQRRRIAYGSVSPFALLQSRKNSAAAFS 920
            E      +  + E+GGKVV V+LS E GEI + Q RRIAYGSVSPFALLQSR+NS ++ S
Sbjct: 58   E----LRDDDDGEVGGKVVNVRLSGEDGEISDPQWRRIAYGSVSPFALLQSRRNSISSLS 113

Query: 919  NMSMGSS-NRLDWWQHIMEYSKDINALLGNSKPPPSSVIEDPKEVLKTVGEATSVKAAWE 743
             M M SS  +  WW+++MEYS+DI +LL N+   P+ +IEDP+ V+K   E TS+KAAWE
Sbjct: 114  KMDMSSSLYQTAWWEYVMEYSRDIKSLLSNTISLPAPLIEDPRSVIKNAEEPTSLKAAWE 173

Query: 742  LMEIFYADKQSQSWLPERLVDWLADYDTLFSPTSATVHSKLLDLQNELVNLQVIEDDPKY 563
            LME+FYADK   SWLPERLVDWL++YD L S +  T++SKL D Q ELV LQ IEDDP+Y
Sbjct: 174  LMELFYADKTCLSWLPERLVDWLSEYDILLSSSHPTIYSKLQDFQKELVGLQAIEDDPRY 233

Query: 562  WEGLSSALAVGWLEIVVKLLRMHGSYQLDQLGNRETENGLVEAVAVLVSKMPRMRSELDE 383
            WE ++SAL+VGWLEIVVKLL +HGSYQLDQLG+RETENGLVEAVAVL+SKMPRMR +L++
Sbjct: 234  WEVMASALSVGWLEIVVKLLHLHGSYQLDQLGHRETENGLVEAVAVLISKMPRMRPQLED 293

Query: 382  TKLGECFKTKPEFLKSWEKWRWQIAKLECSAFWVECDHRQTREGLKKLLQIMLGNTNILS 203
             K GEC   KP+F+K+ E+W+ QI KLECSAFWV+C H QTREGL+ +L+IM+GN + L 
Sbjct: 294  GKFGECSAAKPDFMKTRERWQSQITKLECSAFWVQCAHHQTREGLRNMLKIMIGNADCLR 353

Query: 202  SVTCHWMELYISNFLYIRPFT-----MVSVI-KCAFSCGINYSFIILTLCV 68
            + TC+WMEL++S+ LY+RPFT     M S+  KC  S  +N S  +L L +
Sbjct: 354  AATCNWMELFVSHLLYLRPFTKGLDGMHSLAQKCVQSKPVNTSHKLLRLLI 404