BLASTX nr result

ID: Cimicifuga21_contig00008814 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00008814
         (831 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002269953.1| PREDICTED: uncharacterized protein LOC100255...   170   4e-40
ref|XP_004144648.1| PREDICTED: mediator of RNA polymerase II tra...   169   5e-40
ref|XP_002518403.1| conserved hypothetical protein [Ricinus comm...   165   1e-38
ref|NP_001236135.1| uncharacterized protein LOC100306257 [Glycin...   159   6e-37
dbj|BAJ89307.1| predicted protein [Hordeum vulgare subsp. vulgare]    159   7e-37

>ref|XP_002269953.1| PREDICTED: uncharacterized protein LOC100255926 [Vitis vinifera]
           gi|297734129|emb|CBI15376.3| unnamed protein product
           [Vitis vinifera]
          Length = 115

 Score =  170 bits (430), Expect = 4e-40
 Identities = 86/141 (60%), Positives = 100/141 (70%)
 Frame = -3

Query: 601 MDTQGQNSSLQRLHNVEKVI*DLNYKTRGYNYIHQKWIFYLIAQRVVRVLELAGGVMDEL 422
           MD+Q  N+SLQRL NVEK                          R+++VLELAGGVMDEL
Sbjct: 1   MDSQTPNTSLQRLQNVEK--------------------------RIIKVLELAGGVMDEL 34

Query: 421 SNSTGPRVEVINNHCRDFMQSIKDIQVTLREEIKSACEYRPFEKCDYSSRISNEICCKKL 242
            N +GPR E+++ HC +FMQ IKDIQ+TLR+EIKSACEYRPFEKCDY SRISNEICCKKL
Sbjct: 35  CNPSGPRKELLSIHCGEFMQLIKDIQMTLRDEIKSACEYRPFEKCDYISRISNEICCKKL 94

Query: 241 EYIIEQLDGMKENIDRYQDPI 179
           EY+I QLDGMKE ID Y D +
Sbjct: 95  EYVISQLDGMKETIDEYHDAV 115


>ref|XP_004144648.1| PREDICTED: mediator of RNA polymerase II transcription subunit
           11-like [Cucumis sativus]
           gi|449504225|ref|XP_004162288.1| PREDICTED: mediator of
           RNA polymerase II transcription subunit 11-like [Cucumis
           sativus]
          Length = 118

 Score =  169 bits (429), Expect = 5e-40
 Identities = 85/138 (61%), Positives = 98/138 (71%)
 Frame = -3

Query: 601 MDTQGQNSSLQRLHNVEKVI*DLNYKTRGYNYIHQKWIFYLIAQRVVRVLELAGGVMDEL 422
           MD    N+SLQRL NVEK                          R+VRVLELAGGVM+EL
Sbjct: 1   MDPPAHNTSLQRLQNVEK--------------------------RIVRVLELAGGVMEEL 34

Query: 421 SNSTGPRVEVINNHCRDFMQSIKDIQVTLREEIKSACEYRPFEKCDYSSRISNEICCKKL 242
           +N  GPR E +NNHC +FMQ IKDIQVTLR+EIKSACEYRPFEKCDYSSRI+NE+CCKKL
Sbjct: 35  ANPAGPRKEFVNNHCSEFMQFIKDIQVTLRDEIKSACEYRPFEKCDYSSRITNELCCKKL 94

Query: 241 EYIIEQLDGMKENIDRYQ 188
           EY++ +LDGMK+ ID YQ
Sbjct: 95  EYMVSKLDGMKQTIDDYQ 112


>ref|XP_002518403.1| conserved hypothetical protein [Ricinus communis]
           gi|223542248|gb|EEF43790.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 117

 Score =  165 bits (417), Expect = 1e-38
 Identities = 86/139 (61%), Positives = 98/139 (70%)
 Frame = -3

Query: 595 TQGQNSSLQRLHNVEKVI*DLNYKTRGYNYIHQKWIFYLIAQRVVRVLELAGGVMDELSN 416
           +Q QN+SLQRL NVEKV                          +VRVLELA GVMDEL+ 
Sbjct: 4   SQTQNTSLQRLQNVEKVT-------------------------IVRVLELASGVMDELAA 38

Query: 415 STGPRVEVINNHCRDFMQSIKDIQVTLREEIKSACEYRPFEKCDYSSRISNEICCKKLEY 236
            TGPR E INN+CR+FMQ IKDIQ TLR EIKSACEYRPFEKCDYS RISNEICCKKLEY
Sbjct: 39  PTGPRKEFINNNCREFMQMIKDIQFTLRNEIKSACEYRPFEKCDYSCRISNEICCKKLEY 98

Query: 235 IIEQLDGMKENIDRYQDPI 179
           +I QLD +K +ID+Y+D +
Sbjct: 99  VISQLDAIKLSIDQYEDAL 117


>ref|NP_001236135.1| uncharacterized protein LOC100306257 [Glycine max]
           gi|255628025|gb|ACU14357.1| unknown [Glycine max]
          Length = 115

 Score =  159 bits (403), Expect = 6e-37
 Identities = 81/137 (59%), Positives = 96/137 (70%)
 Frame = -3

Query: 601 MDTQGQNSSLQRLHNVEKVI*DLNYKTRGYNYIHQKWIFYLIAQRVVRVLELAGGVMDEL 422
           MD+QGQ +SLQRL NVEK                          R+V+VLELAGGVMDEL
Sbjct: 1   MDSQGQTTSLQRLQNVEK--------------------------RIVKVLELAGGVMDEL 34

Query: 421 SNSTGPRVEVINNHCRDFMQSIKDIQVTLREEIKSACEYRPFEKCDYSSRISNEICCKKL 242
           ++  GPR +V+ NHC +FMQ IKDIQV LR+EIKSACEYRPFEKCDY SRI+NEIC KK+
Sbjct: 35  ASPVGPRKDVVQNHCLEFMQLIKDIQVALRDEIKSACEYRPFEKCDYGSRIANEICHKKV 94

Query: 241 EYIIEQLDGMKENIDRY 191
           E+I+ QLD MK+ ID Y
Sbjct: 95  EFIMSQLDAMKQTIDEY 111


>dbj|BAJ89307.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 115

 Score =  159 bits (402), Expect = 7e-37
 Identities = 79/141 (56%), Positives = 100/141 (70%)
 Frame = -3

Query: 601 MDTQGQNSSLQRLHNVEKVI*DLNYKTRGYNYIHQKWIFYLIAQRVVRVLELAGGVMDEL 422
           M+ QGQ+SSL+RLHNVE                          QR+VRV+EL+G VM+EL
Sbjct: 1   MNPQGQSSSLERLHNVE--------------------------QRIVRVVELSGAVMEEL 34

Query: 421 SNSTGPRVEVINNHCRDFMQSIKDIQVTLREEIKSACEYRPFEKCDYSSRISNEICCKKL 242
            NS GPR E + +HCRDFM  +K+IQ TLREEIKSACEYRPFEKCDYS+RI+NEICCKKL
Sbjct: 35  GNSQGPRGEAVASHCRDFMLFMKEIQTTLREEIKSACEYRPFEKCDYSARIANEICCKKL 94

Query: 241 EYIIEQLDGMKENIDRYQDPI 179
           EY+IE++D M+ N+++  D +
Sbjct: 95  EYVIEKMDAMQLNMEQSSDGV 115


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