BLASTX nr result
ID: Cimicifuga21_contig00008808
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Cimicifuga21_contig00008808
(2296 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002273715.1| PREDICTED: DEAD-box ATP-dependent RNA helica... 828 0.0
ref|XP_002312182.1| predicted protein [Populus trichocarpa] gi|2... 824 0.0
ref|XP_003552218.1| PREDICTED: DEAD-box ATP-dependent RNA helica... 813 0.0
ref|XP_002520785.1| dead box ATP-dependent RNA helicase, putativ... 813 0.0
ref|XP_003538481.1| PREDICTED: DEAD-box ATP-dependent RNA helica... 810 0.0
>ref|XP_002273715.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 18-like [Vitis
vinifera]
Length = 595
Score = 828 bits (2140), Expect = 0.0
Identities = 427/584 (73%), Positives = 475/584 (81%), Gaps = 2/584 (0%)
Frame = -3
Query: 2216 NKALTNLRFXXXXXXXXXSVLEALTLAGFNFCTPVQASTIPRLCSFKDVAVDAATGSGKT 2037
N+ALT RF VLEALT +GF+FCTPVQA+TIP LCSFKDVAVDAATGSGKT
Sbjct: 12 NRALTTTRFSELNPPLSEPVLEALTQSGFHFCTPVQAATIPLLCSFKDVAVDAATGSGKT 71
Query: 2036 LAFIVPLVEILRRSSETPKPHKVLGVILSPTRELSSQIYHVAQPFIATLSNVRAMLLVGG 1857
LAF+VPLVEILRR+S PKPH+VLGVILSPTRELSSQIY+VAQPFI+TL NV+++LLVGG
Sbjct: 72 LAFVVPLVEILRRASSAPKPHQVLGVILSPTRELSSQIYNVAQPFISTLPNVKSVLLVGG 131
Query: 1856 SSLKADMKSIEEEGANILIGTPGRIYDIMERMDILDLRNLEILILDEADRLLEMGFQKQI 1677
+K+D+K IEEEGAN+LIGTPGR+YDIMERMD+LD RNLEILILDEADRLL+MGFQKQI
Sbjct: 132 VEVKSDLKKIEEEGANLLIGTPGRLYDIMERMDVLDFRNLEILILDEADRLLDMGFQKQI 191
Query: 1676 NSIISRLPKLRRTGLFSATQTEAVEELAKAGLRNPVRVEVRTEMKM--QDTSSQQLASSR 1503
SII+RLPKLRRTGLFSATQTEAVEEL+KAGLRNPVRVEVR E K SSQQLASS+
Sbjct: 192 TSIIARLPKLRRTGLFSATQTEAVEELSKAGLRNPVRVEVRAEAKSLNDSVSSQQLASSK 251
Query: 1502 TPLGLQMEYLECEAEKKSSQLVDFITKNMSEKIIIYFMTCASVDYWGVVLPRLSALKKCP 1323
TP GL +EYLECEA+KK SQLVD + KN S+KIIIYFMTCA VDYWGV+LPRLS LK
Sbjct: 252 TPSGLNIEYLECEADKKPSQLVDLLIKNKSKKIIIYFMTCACVDYWGVILPRLSVLKGFS 311
Query: 1322 IISLHGKMKQIAREKALASFTELSSGVLLCTDVAARGLDIPGVDWIVQYDPPQDPNVFVH 1143
+I LHGKMKQ AREKALASFT LSSG+LLCTDVAARGLDIPGVD IVQYDPPQDPNVF+H
Sbjct: 312 LIPLHGKMKQTAREKALASFTSLSSGILLCTDVAARGLDIPGVDCIVQYDPPQDPNVFIH 371
Query: 1142 RVGRTARFGRPGRAIVFLLPKEEAYVEFLRIRRVPLEERKCCDDVPDIVPQIRSAAKNDR 963
RVGRTAR GR G A+VFLLPKEEAYVEFLRIRRVPL+ C D D+VPQIRSAAK DR
Sbjct: 372 RVGRTARMGRQGSAVVFLLPKEEAYVEFLRIRRVPLQGMTCSSDASDVVPQIRSAAKKDR 431
Query: 962 DVMEKGLKAFVSFIRAYKEHHCSYIFRWKDLEIGKLAKGYGLLQLPAMAELKHNTLSANG 783
DVMEKGL+AFVSF+RAYKEHHCSYIFRWK+LEIGKLA GYGLLQLP+M E+KH++LS G
Sbjct: 432 DVMEKGLRAFVSFVRAYKEHHCSYIFRWKELEIGKLAMGYGLLQLPSMPEVKHHSLSTEG 491
Query: 782 FDPVKDIKVAEIKYKDKPREKQRQKNLKARKEAMXXXXXXXXXXXXXXXXXXXXXXXXXX 603
F PV+DI EIKYKDK REKQR+KNL+A+K
Sbjct: 492 FTPVEDINFEEIKYKDKSREKQRKKNLQAKKAVQDQEPKPQKPNKTPHTAPTVMRKKTAK 551
Query: 602 XXXXXQTVEDADELDRDYRXXXXXXKGTIDESEFDKLTGIEELI 471
QT+ED D+L R+YR KGTIDESEF KLTG EEL+
Sbjct: 552 QRRTAQTIEDEDDLAREYRLLKKLKKGTIDESEFAKLTGTEELL 595
>ref|XP_002312182.1| predicted protein [Populus trichocarpa] gi|222852002|gb|EEE89549.1|
predicted protein [Populus trichocarpa]
Length = 592
Score = 824 bits (2128), Expect = 0.0
Identities = 422/584 (72%), Positives = 480/584 (82%), Gaps = 2/584 (0%)
Frame = -3
Query: 2216 NKALTNLRFXXXXXXXXXSVLEALTLAGFNFCTPVQASTIPRLCSFKDVAVDAATGSGKT 2037
N+ALTN RF VLEALT +GF++CTPVQA+TIP LCS+KDVAVDAATGSGKT
Sbjct: 10 NRALTNTRFSDLKPSISEPVLEALTNSGFDYCTPVQAATIPLLCSYKDVAVDAATGSGKT 69
Query: 2036 LAFIVPLVEILRRSSETPKPHKVLGVILSPTRELSSQIYHVAQPFIATLSNVRAMLLVGG 1857
LAF+VPLVEILRRSS +PKPH+V+G+I+SPTRELSSQIY+VAQPFIATLSN ++MLLVGG
Sbjct: 70 LAFVVPLVEILRRSS-SPKPHQVMGIIISPTRELSSQIYNVAQPFIATLSNFKSMLLVGG 128
Query: 1856 SSLKADMKSIEEEGANILIGTPGRIYDIMERMDILDLRNLEILILDEADRLLEMGFQKQI 1677
+KAD+K IEEEGAN+LIGTPGR++DIM+R+D+LD RNLE+LILDEADRLL+MGFQKQ+
Sbjct: 129 MDVKADVKMIEEEGANLLIGTPGRLFDIMDRVDVLDFRNLEVLILDEADRLLDMGFQKQL 188
Query: 1676 NSIISRLPKLRRTGLFSATQTEAVEELAKAGLRNPVRVEVRTEMKM--QDTSSQQLASSR 1503
NSIISRLPKLRRTGLFSATQTEAVEEL+KAGLRNPV+VEVR E K S QQLA S+
Sbjct: 189 NSIISRLPKLRRTGLFSATQTEAVEELSKAGLRNPVKVEVRAETKSLNNSVSGQQLAPSK 248
Query: 1502 TPLGLQMEYLECEAEKKSSQLVDFITKNMSEKIIIYFMTCASVDYWGVVLPRLSALKKCP 1323
TP GL +EYLECEA+KK SQLVD + KN S+KIIIYFMTCA VDYWGVVLPRL+ L
Sbjct: 249 TPSGLLLEYLECEADKKPSQLVDLLVKNKSKKIIIYFMTCACVDYWGVVLPRLTVLNGFS 308
Query: 1322 IISLHGKMKQIAREKALASFTELSSGVLLCTDVAARGLDIPGVDWIVQYDPPQDPNVFVH 1143
+ISLHGKMKQ AREKAL SFT L+SG+LLCTDVAARGLDIPGVD IVQYDPPQDPNVFVH
Sbjct: 309 LISLHGKMKQTAREKALTSFTSLTSGILLCTDVAARGLDIPGVDCIVQYDPPQDPNVFVH 368
Query: 1142 RVGRTARFGRPGRAIVFLLPKEEAYVEFLRIRRVPLEERKCCDDVPDIVPQIRSAAKNDR 963
RVGRTAR GR G +IVFLLPKEEAYVEFLRIRRVPL ERKC DD PD+VPQIRSAAK DR
Sbjct: 369 RVGRTARLGRQGSSIVFLLPKEEAYVEFLRIRRVPLLERKCADDAPDVVPQIRSAAKKDR 428
Query: 962 DVMEKGLKAFVSFIRAYKEHHCSYIFRWKDLEIGKLAKGYGLLQLPAMAELKHNTLSANG 783
DVMEKGL+AFVS+IRAYKEHHCSYIFRWK+LE+GKL GYGLLQLP+M E+KH++LS
Sbjct: 429 DVMEKGLRAFVSYIRAYKEHHCSYIFRWKELEVGKLGMGYGLLQLPSMPEVKHHSLSTKD 488
Query: 782 FDPVKDIKVAEIKYKDKPREKQRQKNLKARKEAMXXXXXXXXXXXXXXXXXXXXXXXXXX 603
F PV D+ + EIKYKDK R+KQR+KNL+A+KEA
Sbjct: 489 FTPVDDLNLEEIKYKDKSRQKQRRKNLQAKKEARQQESKPQKVSKTPSAAATAMRKKTAK 548
Query: 602 XXXXXQTVEDADELDRDYRXXXXXXKGTIDESEFDKLTGIEELI 471
QTVED +EL R+YR KGTIDESEF+KLTG +EL+
Sbjct: 549 QRRAAQTVEDEEELAREYRLLKKLKKGTIDESEFEKLTGTDELL 592
>ref|XP_003552218.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 18-like [Glycine max]
Length = 589
Score = 813 bits (2099), Expect = 0.0
Identities = 416/587 (70%), Positives = 481/587 (81%), Gaps = 2/587 (0%)
Frame = -3
Query: 2225 ESANKALTNLRFXXXXXXXXXSVLEALTLAGFNFCTPVQASTIPRLCSFKDVAVDAATGS 2046
E NKALT+ RF VL+AL+ +GF FCTPVQA+TIP LCSFKDVAVDAATGS
Sbjct: 4 EFPNKALTSTRFSDLNPPLSEPVLQALSHSGFEFCTPVQAATIPLLCSFKDVAVDAATGS 63
Query: 2045 GKTLAFIVPLVEILRRSSETPKPHKVLGVILSPTRELSSQIYHVAQPFIATLSNVRAMLL 1866
GKTLAF+VPLVEILRRSS PKPH+VLG+I+SPTRELS+QIYHVAQPFI+TL+NV++MLL
Sbjct: 64 GKTLAFVVPLVEILRRSSSHPKPHQVLGIIISPTRELSTQIYHVAQPFISTLANVKSMLL 123
Query: 1865 VGGSSLKADMKSIEEEGANILIGTPGRIYDIMERMDILDLRNLEILILDEADRLLEMGFQ 1686
VGG+ +KAD+K IEEEGANILIGTPGR+YDIM RMD+LDL+NLEILILDEADRLL+MGFQ
Sbjct: 124 VGGAEVKADLKKIEEEGANILIGTPGRLYDIMNRMDVLDLKNLEILILDEADRLLDMGFQ 183
Query: 1685 KQINSIISRLPKLRRTGLFSATQTEAVEELAKAGLRNPVRVEVRTEMKMQD--TSSQQLA 1512
KQI SII+ LPKLRRTGLFSATQTEA+EELAKAGLRNPVRVEVR E K ++ SS+Q
Sbjct: 184 KQITSIITLLPKLRRTGLFSATQTEAIEELAKAGLRNPVRVEVRAETKSENGPASSKQPE 243
Query: 1511 SSRTPLGLQMEYLECEAEKKSSQLVDFITKNMSEKIIIYFMTCASVDYWGVVLPRLSALK 1332
SS+TP GL +EYLECEA+KK SQLV + KN+S+KIIIYFMTCA VDYWG VLP LS LK
Sbjct: 244 SSKTPSGLHIEYLECEADKKPSQLVHILIKNLSKKIIIYFMTCACVDYWGAVLPCLSVLK 303
Query: 1331 KCPIISLHGKMKQIAREKALASFTELSSGVLLCTDVAARGLDIPGVDWIVQYDPPQDPNV 1152
+I LHGKMKQ AREKALASFT LS+G+LLCTDVAARGLDIPGVD IVQYDPPQDPNV
Sbjct: 304 GFSLIPLHGKMKQSAREKALASFTSLSNGILLCTDVAARGLDIPGVDCIVQYDPPQDPNV 363
Query: 1151 FVHRVGRTARFGRPGRAIVFLLPKEEAYVEFLRIRRVPLEERKCCDDVPDIVPQIRSAAK 972
F+HRVGRTAR G+ G A+VFLLPKEE+YVEFLRIRRVPL+ER C D+ D+VPQIRSAAK
Sbjct: 364 FIHRVGRTARLGKQGHAVVFLLPKEESYVEFLRIRRVPLQERICADEASDVVPQIRSAAK 423
Query: 971 NDRDVMEKGLKAFVSFIRAYKEHHCSYIFRWKDLEIGKLAKGYGLLQLPAMAELKHNTLS 792
DRDVMEKG+KAFVS+IRAYKEHHCSYIFRWK+LEIGKLA G+GLLQLP+M E+KH++LS
Sbjct: 424 KDRDVMEKGIKAFVSYIRAYKEHHCSYIFRWKELEIGKLATGFGLLQLPSMPEVKHHSLS 483
Query: 791 ANGFDPVKDIKVAEIKYKDKPREKQRQKNLKARKEAMXXXXXXXXXXXXXXXXXXXXXXX 612
+GF+PV+DI + +IKY+DK REKQR+KNL+A+KEA
Sbjct: 484 IDGFEPVEDINLGDIKYRDKSREKQRKKNLQAKKEAKEKEPKPQKPKKTPNAPTDMRKKT 543
Query: 611 XXXXXXXXQTVEDADELDRDYRXXXXXXKGTIDESEFDKLTGIEELI 471
T+ED +EL +YR KGTIDE+E+ KLTG EEL+
Sbjct: 544 ARQRRAQQ-TMEDEEELMHEYRLLKKLKKGTIDENEYAKLTGTEELL 589
>ref|XP_002520785.1| dead box ATP-dependent RNA helicase, putative [Ricinus communis]
gi|223539916|gb|EEF41494.1| dead box ATP-dependent RNA
helicase, putative [Ricinus communis]
Length = 592
Score = 813 bits (2099), Expect = 0.0
Identities = 419/583 (71%), Positives = 475/583 (81%), Gaps = 1/583 (0%)
Frame = -3
Query: 2216 NKALTNLRFXXXXXXXXXSVLEALTLAGFNFCTPVQASTIPRLCSFKDVAVDAATGSGKT 2037
N+ALT RF SV+ ALT AGF +CTPVQA+TIP LC +KDVAVDAATGSGKT
Sbjct: 10 NRALTETRFADLHPPLSESVVHALTQAGFEYCTPVQAATIPLLCRYKDVAVDAATGSGKT 69
Query: 2036 LAFIVPLVEILRRSSETPKPHKVLGVILSPTRELSSQIYHVAQPFIATLSNVRAMLLVGG 1857
LAF+VPLVEILRR S K H+V+G+ILSPTRELSSQIY+VAQPFI TLSNV++MLLVGG
Sbjct: 70 LAFVVPLVEILRRLSSPIKLHQVMGIILSPTRELSSQIYNVAQPFIETLSNVKSMLLVGG 129
Query: 1856 SSLKADMKSIEEEGANILIGTPGRIYDIMERMDILDLRNLEILILDEADRLLEMGFQKQI 1677
+KAD+K IEEEGANILIGTPGR++DIMER+DILD RNLE+LILDEADRLL+MGFQKQI
Sbjct: 130 VDVKADVKKIEEEGANILIGTPGRLFDIMERVDILDFRNLEVLILDEADRLLDMGFQKQI 189
Query: 1676 NSIISRLPKLRRTGLFSATQTEAVEELAKAGLRNPVRVEVRTEMK-MQDTSSQQLASSRT 1500
SIISRLPKLRRTGLFSATQTEAVEELAKAGLRNPVRVEVR + K + +++S QL+SS+T
Sbjct: 190 TSIISRLPKLRRTGLFSATQTEAVEELAKAGLRNPVRVEVRAQTKSLNESASSQLSSSKT 249
Query: 1499 PLGLQMEYLECEAEKKSSQLVDFITKNMSEKIIIYFMTCASVDYWGVVLPRLSALKKCPI 1320
P GLQ+EYLECEA+ K S LV + KN S+KII+YFMTCA VDYWGVVLPRL+ALK +
Sbjct: 250 PSGLQLEYLECEADMKPSHLVSLLNKNKSKKIIVYFMTCACVDYWGVVLPRLTALKDFSL 309
Query: 1319 ISLHGKMKQIAREKALASFTELSSGVLLCTDVAARGLDIPGVDWIVQYDPPQDPNVFVHR 1140
I LHGKMKQ AR+KALASFT L+SG+LLCTDVAARGLDIPGVD IVQYDPPQDPNVF+HR
Sbjct: 310 IPLHGKMKQTARDKALASFTSLTSGILLCTDVAARGLDIPGVDCIVQYDPPQDPNVFIHR 369
Query: 1139 VGRTARFGRPGRAIVFLLPKEEAYVEFLRIRRVPLEERKCCDDVPDIVPQIRSAAKNDRD 960
VGRTAR GR G AIVFLLPKEEAYVEFLRIRRVPL+E K DD PD+VPQIRSAAK DRD
Sbjct: 370 VGRTARLGRQGSAIVFLLPKEEAYVEFLRIRRVPLQEMKITDDAPDVVPQIRSAAKKDRD 429
Query: 959 VMEKGLKAFVSFIRAYKEHHCSYIFRWKDLEIGKLAKGYGLLQLPAMAELKHNTLSANGF 780
VMEKGL+AFVSFIRAYKEHHCSYIFRWK+LE+GKL GYGLLQLP+M E+KH++LS GF
Sbjct: 430 VMEKGLRAFVSFIRAYKEHHCSYIFRWKELEVGKLGMGYGLLQLPSMPEVKHHSLSTVGF 489
Query: 779 DPVKDIKVAEIKYKDKPREKQRQKNLKARKEAMXXXXXXXXXXXXXXXXXXXXXXXXXXX 600
P +DIK+ +IK+KDK REKQR+KNL+A+KE
Sbjct: 490 TPAEDIKLEDIKFKDKSREKQRKKNLQAKKEKQQQEPKPQKPNKNPSAAPTVMRKKTAKQ 549
Query: 599 XXXXQTVEDADELDRDYRXXXXXXKGTIDESEFDKLTGIEELI 471
QTVED DEL R+YR KGTIDESEF KLTG E+L+
Sbjct: 550 RRAAQTVEDEDELSREYRLLKKLKKGTIDESEFAKLTGTEDLL 592
>ref|XP_003538481.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 18-like isoform 1
[Glycine max]
Length = 589
Score = 810 bits (2091), Expect = 0.0
Identities = 415/587 (70%), Positives = 479/587 (81%), Gaps = 2/587 (0%)
Frame = -3
Query: 2225 ESANKALTNLRFXXXXXXXXXSVLEALTLAGFNFCTPVQASTIPRLCSFKDVAVDAATGS 2046
E NKALT++RF VL+AL+ +GF+FCTPVQA+TIP LCSFKDVAVDAATGS
Sbjct: 4 EFPNKALTSVRFSDLNPPLSEPVLQALSHSGFDFCTPVQAATIPLLCSFKDVAVDAATGS 63
Query: 2045 GKTLAFIVPLVEILRRSSETPKPHKVLGVILSPTRELSSQIYHVAQPFIATLSNVRAMLL 1866
GKTLAF++PLVEILRRSS PKPHKVLG+I+SPTRELS+QIYHVAQ FI+TL NV++MLL
Sbjct: 64 GKTLAFVIPLVEILRRSSSHPKPHKVLGIIISPTRELSTQIYHVAQSFISTLMNVKSMLL 123
Query: 1865 VGGSSLKADMKSIEEEGANILIGTPGRIYDIMERMDILDLRNLEILILDEADRLLEMGFQ 1686
VGG+ +K D+K IEEEGANILIGTPGR+YDIM RMD+LDL+NLEILILDEADRLL+MGFQ
Sbjct: 124 VGGAEVKTDIKKIEEEGANILIGTPGRLYDIMNRMDVLDLKNLEILILDEADRLLDMGFQ 183
Query: 1685 KQINSIISRLPKLRRTGLFSATQTEAVEELAKAGLRNPVRVEVRTEMKMQD--TSSQQLA 1512
KQI SIIS LPKLRRTGLFSATQTEA+EELAKAGLRNPVRVEVR E K + SS+Q
Sbjct: 184 KQITSIISLLPKLRRTGLFSATQTEAIEELAKAGLRNPVRVEVRAETKSEKGPASSKQPE 243
Query: 1511 SSRTPLGLQMEYLECEAEKKSSQLVDFITKNMSEKIIIYFMTCASVDYWGVVLPRLSALK 1332
SS+TP GL +EYLECE +KK SQL+D + KN S+KIIIYFMTCA VDYWG VLP LS LK
Sbjct: 244 SSKTPSGLHIEYLECEEDKKPSQLLDILIKNRSKKIIIYFMTCACVDYWGAVLPCLSVLK 303
Query: 1331 KCPIISLHGKMKQIAREKALASFTELSSGVLLCTDVAARGLDIPGVDWIVQYDPPQDPNV 1152
+I LHGKMKQ AREKALASFT LS+G+LLCTDVAARGLDIPGVD IVQYDPPQDPNV
Sbjct: 304 GFSLIPLHGKMKQSAREKALASFTTLSNGILLCTDVAARGLDIPGVDCIVQYDPPQDPNV 363
Query: 1151 FVHRVGRTARFGRPGRAIVFLLPKEEAYVEFLRIRRVPLEERKCCDDVPDIVPQIRSAAK 972
F+HRVGRTAR G+ G A+VFLLPKEE+YVEFLRIRRVPL+ER C DD D+VPQIRSAAK
Sbjct: 364 FIHRVGRTARLGKQGHAVVFLLPKEESYVEFLRIRRVPLQERICSDDATDVVPQIRSAAK 423
Query: 971 NDRDVMEKGLKAFVSFIRAYKEHHCSYIFRWKDLEIGKLAKGYGLLQLPAMAELKHNTLS 792
DRDVMEKG+KAFVS+IRAYKEHHCSYIFRWK+LEIGKLA G+GLLQLP+M E+KH++LS
Sbjct: 424 KDRDVMEKGIKAFVSYIRAYKEHHCSYIFRWKELEIGKLATGFGLLQLPSMPEVKHHSLS 483
Query: 791 ANGFDPVKDIKVAEIKYKDKPREKQRQKNLKARKEAMXXXXXXXXXXXXXXXXXXXXXXX 612
+GF+PV+DI + +IKY+DK REKQR+KNL+A+KEA
Sbjct: 484 TDGFEPVEDINLVDIKYRDKSREKQRKKNLQAKKEAKEREPKPQKPKKTPIAPTATRKKT 543
Query: 611 XXXXXXXXQTVEDADELDRDYRXXXXXXKGTIDESEFDKLTGIEELI 471
T+ED +EL ++YR KGTIDE+E+ KLTG EEL+
Sbjct: 544 ARQRRAQQ-TMEDEEELMQEYRLLKKLKKGTIDENEYAKLTGTEELL 589