BLASTX nr result

ID: Cimicifuga21_contig00008800 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00008800
         (1182 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABK94018.1| unknown [Populus trichocarpa]                           94   5e-17
ref|XP_002319603.1| predicted protein [Populus trichocarpa] gi|2...    92   2e-16
emb|CBI34242.3| unnamed protein product [Vitis vinifera]               79   2e-12
emb|CAN77950.1| hypothetical protein VITISV_016129 [Vitis vinifera]    78   5e-12
ref|XP_003633667.1| PREDICTED: uncharacterized protein LOC100855...    60   8e-07

>gb|ABK94018.1| unknown [Populus trichocarpa]
          Length = 295

 Score = 94.4 bits (233), Expect = 5e-17
 Identities = 56/133 (42%), Positives = 76/133 (57%), Gaps = 7/133 (5%)
 Frame = -3

Query: 523 KGSGYTARNPYFDN-------TQETTVVTTGGWVRPSKEGWATPPNIDLPLTKPTNDIDA 365
           K  G   RN  +D+         E T+ T+GGW RPS   WA PPN   PL+  TNDI A
Sbjct: 165 KPGGNAHRNDNYDDYYRKQGSNMEPTMNTSGGWARPSHSTWAAPPNA--PLSGATNDISA 222

Query: 364 AINYLQEAAMHTPLSMAPAKHRLAVPTPMVPTIDSREARQKYGNFTESPQAVRTANAYSS 185
           A+  L+E A  +  +  P+++R   PT    TIDS+EA ++YGNF  S +     ++Y+S
Sbjct: 223 AVGLLREVAKPSFSTSPPSRYR--EPTH-ANTIDSKEAARRYGNFNYSSRPYTRDDSYTS 279

Query: 184 AIDSREAVRRYGG 146
            IDSREA R+Y G
Sbjct: 280 TIDSREAARKYSG 292



 Score = 64.7 bits (156), Expect = 4e-08
 Identities = 40/88 (45%), Positives = 51/88 (57%), Gaps = 1/88 (1%)
 Frame = -2

Query: 1082 MAGYGYMNGGRNSYEQSEIGPRYDGWGTNNGYETHSHGHRDHVCKPVIIDAQGRKRPIVS 903
            MAG GY   G +SY+     P  D +G+  GY        DHVC+PVIIDA GRKRPI+S
Sbjct: 1    MAGIGYSYRGYSSYDP----PSSDDYGSKTGYVP------DHVCRPVIIDADGRKRPIIS 50

Query: 902  YGPMPHDHMNGIVTKTETIVEK-VHVPQ 822
            Y      + +  VTKTET  ++ VH P+
Sbjct: 51   Y--RVDQNADQYVTKTETYYQQHVHPPK 76


>ref|XP_002319603.1| predicted protein [Populus trichocarpa] gi|222857979|gb|EEE95526.1|
           predicted protein [Populus trichocarpa]
          Length = 296

 Score = 92.4 bits (228), Expect = 2e-16
 Identities = 55/131 (41%), Positives = 76/131 (58%), Gaps = 6/131 (4%)
 Frame = -3

Query: 520 GSGYTARNPYFD------NTQETTVVTTGGWVRPSKEGWATPPNIDLPLTKPTNDIDAAI 359
           G+ +   N Y D      +  E T+ T+GGW RPS   WA PPN   PL+  TNDI AA+
Sbjct: 168 GNAHRNDNNYDDYYRKQGSNMEPTMNTSGGWARPSHSTWAAPPNA--PLSGATNDISAAV 225

Query: 358 NYLQEAAMHTPLSMAPAKHRLAVPTPMVPTIDSREARQKYGNFTESPQAVRTANAYSSAI 179
             L+E A  +  +  P+++R   PT    TIDS+EA ++YGNF  S +     ++Y+S I
Sbjct: 226 GLLREVAKPSFSTSPPSRYR--EPT-YANTIDSKEAARRYGNFNFSSRPYTRDDSYTSTI 282

Query: 178 DSREAVRRYGG 146
           DSREA R+Y G
Sbjct: 283 DSREAARKYRG 293



 Score = 64.3 bits (155), Expect = 6e-08
 Identities = 40/87 (45%), Positives = 50/87 (57%), Gaps = 1/87 (1%)
 Frame = -2

Query: 1082 MAGYGYMNGGRNSYEQSEIGPRYDGWGTNNGYETHSHGHRDHVCKPVIIDAQGRKRPIVS 903
            MAG GY   G +SY+     P  D +G+  GY        DHVC+PVIIDA GRKRPI+S
Sbjct: 1    MAGIGYSYRGYSSYDP----PSSDDYGSKTGYVP------DHVCRPVIIDADGRKRPIIS 50

Query: 902  YGPMPHDHMNGIVTKTETIVEK-VHVP 825
            Y      + +  VTKTET  ++ VH P
Sbjct: 51   Y--RVDQNADQYVTKTETYYQQHVHPP 75


>emb|CBI34242.3| unnamed protein product [Vitis vinifera]
          Length = 333

 Score = 79.0 bits (193), Expect = 2e-12
 Identities = 51/113 (45%), Positives = 66/113 (58%), Gaps = 5/113 (4%)
 Frame = -3

Query: 487 DNTQETTVVTTGGWV-RPSKEGWATPPNIDLPLTKPTNDIDAAINYLQEAAMHTPLSMAP 311
           D T+E T+  + GW  RP +  WATPP   L  T+PT+DI AA+  L+EAAM  P S  P
Sbjct: 213 DGTKEPTITNSNGWGGRPKQAEWATPPGSKL--TRPTSDIGAAVEILKEAAM--PSSGQP 268

Query: 310 AKHRLAVPTPMVP----TIDSREARQKYGNFTESPQAVRTANAYSSAIDSREA 164
              R A P P VP    TIDS+EA ++YGNF  +P+   T     + IDS+ A
Sbjct: 269 V--RFATPAPTVPKYAETIDSKEAARRYGNFKPTPRPDLTG---GTIIDSKTA 316



 Score = 67.8 bits (164), Expect = 5e-09
 Identities = 38/83 (45%), Positives = 48/83 (57%), Gaps = 6/83 (7%)
 Frame = -2

Query: 1073 YGYMNGGRNSYEQSE------IGPRYDGWGTNNGYETHSHGHRDHVCKPVIIDAQGRKRP 912
            YGY NGGR+    S+       GPR + W    G     +GH DHVC+PVI+DA GRKRP
Sbjct: 36   YGYWNGGRSDGGYSDGGYTTHNGPREEEWRKGAG-----NGHADHVCRPVIVDAMGRKRP 90

Query: 911  IVSYGPMPHDHMNGIVTKTETIV 843
            IV + P+   +    V +TETIV
Sbjct: 91   IVCFNPI--SNTETYVAQTETIV 111


>emb|CAN77950.1| hypothetical protein VITISV_016129 [Vitis vinifera]
          Length = 541

 Score = 77.8 bits (190), Expect = 5e-12
 Identities = 50/113 (44%), Positives = 66/113 (58%), Gaps = 5/113 (4%)
 Frame = -3

Query: 487 DNTQETTVVTTGGWV-RPSKEGWATPPNIDLPLTKPTNDIDAAINYLQEAAMHTPLSMAP 311
           D T+E T+  + GW  RP +  WATPP   L  T+PT+DI AA+  L+EAAM  P S  P
Sbjct: 278 DGTKEPTITNSNGWGGRPKQAEWATPPGSKL--TRPTSDIGAAVEILKEAAM--PSSGQP 333

Query: 310 AKHRLAVPTPMVP----TIDSREARQKYGNFTESPQAVRTANAYSSAIDSREA 164
              R + P P VP    TIDS+EA ++YGNF  +P+   T     + IDS+ A
Sbjct: 334 V--RFSTPAPTVPKYAETIDSKEAARRYGNFKPTPRPDLTG---GTIIDSKTA 381



 Score = 68.6 bits (166), Expect = 3e-09
 Identities = 39/89 (43%), Positives = 49/89 (55%), Gaps = 12/89 (13%)
 Frame = -2

Query: 1073 YGYMNGGRNSYEQSEIGPRYDGWGTNNGYETHS------------HGHRDHVCKPVIIDA 930
            YGY NGGR+           DG  T+ GY TH+            +GH DHVC+PVI+DA
Sbjct: 5    YGYWNGGRS-----------DGGYTDGGYTTHNGPREEEWRKGAGNGHADHVCRPVIVDA 53

Query: 929  QGRKRPIVSYGPMPHDHMNGIVTKTETIV 843
             GRKRPIV + P+   +    V +TETIV
Sbjct: 54   MGRKRPIVCFNPI--SNTETYVAQTETIV 80


>ref|XP_003633667.1| PREDICTED: uncharacterized protein LOC100855224 [Vitis vinifera]
          Length = 271

 Score = 60.5 bits (145), Expect = 8e-07
 Identities = 44/117 (37%), Positives = 61/117 (52%), Gaps = 10/117 (8%)
 Frame = -3

Query: 529 WNKGSGYTARNPYFD-----NTQETTVV-TTGGW-VRPSKEGWATPPNIDLPLTKPTNDI 371
           WN+ SG T RN  FD     N +   V+ T+GGW  RP+  GW+      L  TKPTN+I
Sbjct: 155 WNRPSGNTIRNDGFDDYHRRNDRAMEVMNTSGGWGSRPNSGGWSATSGSSL--TKPTNNI 212

Query: 370 DAAINYLQEAAMHTPLSMAPAKHRLAVPTPMVPTIDSREARQKYGNF---TESPQAV 209
             A+  L+EAA  T  S       ++       T DS +A ++YGNF   + SP++V
Sbjct: 213 GEAVETLKEAATST-FSRQGGSAPVSAGPRYAETTDSMDAARRYGNFKLTSRSPKSV 268


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