BLASTX nr result
ID: Cimicifuga21_contig00008783
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Cimicifuga21_contig00008783 (1465 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002530643.1| Arginine/serine-rich-splicing factor, putati... 152 3e-34 ref|XP_004158852.1| PREDICTED: uncharacterized LOC101219220 [Cuc... 145 3e-32 ref|XP_004135013.1| PREDICTED: uncharacterized RNA-binding prote... 145 3e-32 gb|ADE76245.1| unknown [Picea sitchensis] gi|294463638|gb|ADE773... 145 3e-32 gb|ACU18771.1| unknown [Glycine max] 142 2e-31 >ref|XP_002530643.1| Arginine/serine-rich-splicing factor, putative [Ricinus communis] gi|223529816|gb|EEF31751.1| Arginine/serine-rich-splicing factor, putative [Ricinus communis] Length = 248 Score = 152 bits (383), Expect = 3e-34 Identities = 74/85 (87%), Positives = 79/85 (92%) Frame = +3 Query: 597 GRTEAVNPGNTLYVTGLSTRIREEDLEEHFSKEGKVLSCRLVVEPRTRMSRGFAFVTMDT 776 GRTEAVNPGNTLYVTGLSTR+ E LEEHF+KEGKV SC LVVEPRTR+SRGFAFVTMD Sbjct: 65 GRTEAVNPGNTLYVTGLSTRVTERGLEEHFAKEGKVASCFLVVEPRTRISRGFAFVTMDN 124 Query: 777 LEDADRCVKYLNQSVLEGRYITVEK 851 +EDA+RCVKYLNQSVLEGRYITVEK Sbjct: 125 VEDANRCVKYLNQSVLEGRYITVEK 149 >ref|XP_004158852.1| PREDICTED: uncharacterized LOC101219220 [Cucumis sativus] Length = 244 Score = 145 bits (366), Expect = 3e-32 Identities = 70/85 (82%), Positives = 77/85 (90%) Frame = +3 Query: 597 GRTEAVNPGNTLYVTGLSTRIREEDLEEHFSKEGKVLSCRLVVEPRTRMSRGFAFVTMDT 776 GR A NPGNTLYVTGLSTR+ E DLEEHFSKEGKV SC LVVEPRTR+SRGFAFVTMD Sbjct: 56 GREHANNPGNTLYVTGLSTRVTERDLEEHFSKEGKVASCFLVVEPRTRISRGFAFVTMDN 115 Query: 777 LEDADRCVKYLNQSVLEGRYITVEK 851 ++DA+RCVK+LNQS+LEGRYITVEK Sbjct: 116 VDDANRCVKHLNQSILEGRYITVEK 140 >ref|XP_004135013.1| PREDICTED: uncharacterized RNA-binding protein C25G10.01-like, partial [Cucumis sativus] Length = 238 Score = 145 bits (366), Expect = 3e-32 Identities = 70/85 (82%), Positives = 77/85 (90%) Frame = +3 Query: 597 GRTEAVNPGNTLYVTGLSTRIREEDLEEHFSKEGKVLSCRLVVEPRTRMSRGFAFVTMDT 776 GR A NPGNTLYVTGLSTR+ E DLEEHFSKEGKV SC LVVEPRTR+SRGFAFVTMD Sbjct: 50 GREHANNPGNTLYVTGLSTRVTERDLEEHFSKEGKVASCFLVVEPRTRISRGFAFVTMDN 109 Query: 777 LEDADRCVKYLNQSVLEGRYITVEK 851 ++DA+RCVK+LNQS+LEGRYITVEK Sbjct: 110 VDDANRCVKHLNQSILEGRYITVEK 134 >gb|ADE76245.1| unknown [Picea sitchensis] gi|294463638|gb|ADE77346.1| unknown [Picea sitchensis] Length = 220 Score = 145 bits (365), Expect = 3e-32 Identities = 68/85 (80%), Positives = 77/85 (90%) Frame = +3 Query: 597 GRTEAVNPGNTLYVTGLSTRIREEDLEEHFSKEGKVLSCRLVVEPRTRMSRGFAFVTMDT 776 G EA NPGNTLYVTGLSTR+ E+DLEEHFS EGKV+ CRLVVEPRTR+SRGF FVTM + Sbjct: 33 GNEEAENPGNTLYVTGLSTRVTEKDLEEHFSGEGKVIDCRLVVEPRTRISRGFGFVTMGS 92 Query: 777 LEDADRCVKYLNQSVLEGRYITVEK 851 LEDA+RC+KYLNQS+LEGR+ITVEK Sbjct: 93 LEDAERCIKYLNQSILEGRFITVEK 117 >gb|ACU18771.1| unknown [Glycine max] Length = 246 Score = 142 bits (359), Expect = 2e-31 Identities = 68/84 (80%), Positives = 77/84 (91%) Frame = +3 Query: 600 RTEAVNPGNTLYVTGLSTRIREEDLEEHFSKEGKVLSCRLVVEPRTRMSRGFAFVTMDTL 779 R+EA N G TLYVTGLS+R+ E DLEEHFSKEGKV SC LVVEPRTR+SRGFAF+TMDT+ Sbjct: 61 RSEAKNAGTTLYVTGLSSRVTERDLEEHFSKEGKVASCFLVVEPRTRISRGFAFITMDTV 120 Query: 780 EDADRCVKYLNQSVLEGRYITVEK 851 EDA+RC+KYLNQSVLEGRYITVE+ Sbjct: 121 EDANRCIKYLNQSVLEGRYITVER 144