BLASTX nr result

ID: Cimicifuga21_contig00008783 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00008783
         (1465 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002530643.1| Arginine/serine-rich-splicing factor, putati...   152   3e-34
ref|XP_004158852.1| PREDICTED: uncharacterized LOC101219220 [Cuc...   145   3e-32
ref|XP_004135013.1| PREDICTED: uncharacterized RNA-binding prote...   145   3e-32
gb|ADE76245.1| unknown [Picea sitchensis] gi|294463638|gb|ADE773...   145   3e-32
gb|ACU18771.1| unknown [Glycine max]                                  142   2e-31

>ref|XP_002530643.1| Arginine/serine-rich-splicing factor, putative [Ricinus communis]
           gi|223529816|gb|EEF31751.1|
           Arginine/serine-rich-splicing factor, putative [Ricinus
           communis]
          Length = 248

 Score =  152 bits (383), Expect = 3e-34
 Identities = 74/85 (87%), Positives = 79/85 (92%)
 Frame = +3

Query: 597 GRTEAVNPGNTLYVTGLSTRIREEDLEEHFSKEGKVLSCRLVVEPRTRMSRGFAFVTMDT 776
           GRTEAVNPGNTLYVTGLSTR+ E  LEEHF+KEGKV SC LVVEPRTR+SRGFAFVTMD 
Sbjct: 65  GRTEAVNPGNTLYVTGLSTRVTERGLEEHFAKEGKVASCFLVVEPRTRISRGFAFVTMDN 124

Query: 777 LEDADRCVKYLNQSVLEGRYITVEK 851
           +EDA+RCVKYLNQSVLEGRYITVEK
Sbjct: 125 VEDANRCVKYLNQSVLEGRYITVEK 149


>ref|XP_004158852.1| PREDICTED: uncharacterized LOC101219220 [Cucumis sativus]
          Length = 244

 Score =  145 bits (366), Expect = 3e-32
 Identities = 70/85 (82%), Positives = 77/85 (90%)
 Frame = +3

Query: 597 GRTEAVNPGNTLYVTGLSTRIREEDLEEHFSKEGKVLSCRLVVEPRTRMSRGFAFVTMDT 776
           GR  A NPGNTLYVTGLSTR+ E DLEEHFSKEGKV SC LVVEPRTR+SRGFAFVTMD 
Sbjct: 56  GREHANNPGNTLYVTGLSTRVTERDLEEHFSKEGKVASCFLVVEPRTRISRGFAFVTMDN 115

Query: 777 LEDADRCVKYLNQSVLEGRYITVEK 851
           ++DA+RCVK+LNQS+LEGRYITVEK
Sbjct: 116 VDDANRCVKHLNQSILEGRYITVEK 140


>ref|XP_004135013.1| PREDICTED: uncharacterized RNA-binding protein C25G10.01-like,
           partial [Cucumis sativus]
          Length = 238

 Score =  145 bits (366), Expect = 3e-32
 Identities = 70/85 (82%), Positives = 77/85 (90%)
 Frame = +3

Query: 597 GRTEAVNPGNTLYVTGLSTRIREEDLEEHFSKEGKVLSCRLVVEPRTRMSRGFAFVTMDT 776
           GR  A NPGNTLYVTGLSTR+ E DLEEHFSKEGKV SC LVVEPRTR+SRGFAFVTMD 
Sbjct: 50  GREHANNPGNTLYVTGLSTRVTERDLEEHFSKEGKVASCFLVVEPRTRISRGFAFVTMDN 109

Query: 777 LEDADRCVKYLNQSVLEGRYITVEK 851
           ++DA+RCVK+LNQS+LEGRYITVEK
Sbjct: 110 VDDANRCVKHLNQSILEGRYITVEK 134


>gb|ADE76245.1| unknown [Picea sitchensis] gi|294463638|gb|ADE77346.1| unknown
           [Picea sitchensis]
          Length = 220

 Score =  145 bits (365), Expect = 3e-32
 Identities = 68/85 (80%), Positives = 77/85 (90%)
 Frame = +3

Query: 597 GRTEAVNPGNTLYVTGLSTRIREEDLEEHFSKEGKVLSCRLVVEPRTRMSRGFAFVTMDT 776
           G  EA NPGNTLYVTGLSTR+ E+DLEEHFS EGKV+ CRLVVEPRTR+SRGF FVTM +
Sbjct: 33  GNEEAENPGNTLYVTGLSTRVTEKDLEEHFSGEGKVIDCRLVVEPRTRISRGFGFVTMGS 92

Query: 777 LEDADRCVKYLNQSVLEGRYITVEK 851
           LEDA+RC+KYLNQS+LEGR+ITVEK
Sbjct: 93  LEDAERCIKYLNQSILEGRFITVEK 117


>gb|ACU18771.1| unknown [Glycine max]
          Length = 246

 Score =  142 bits (359), Expect = 2e-31
 Identities = 68/84 (80%), Positives = 77/84 (91%)
 Frame = +3

Query: 600 RTEAVNPGNTLYVTGLSTRIREEDLEEHFSKEGKVLSCRLVVEPRTRMSRGFAFVTMDTL 779
           R+EA N G TLYVTGLS+R+ E DLEEHFSKEGKV SC LVVEPRTR+SRGFAF+TMDT+
Sbjct: 61  RSEAKNAGTTLYVTGLSSRVTERDLEEHFSKEGKVASCFLVVEPRTRISRGFAFITMDTV 120

Query: 780 EDADRCVKYLNQSVLEGRYITVEK 851
           EDA+RC+KYLNQSVLEGRYITVE+
Sbjct: 121 EDANRCIKYLNQSVLEGRYITVER 144


Top