BLASTX nr result
ID: Cimicifuga21_contig00008770
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Cimicifuga21_contig00008770
(2315 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002534335.1| RNA binding protein, putative [Ricinus commu... 664 0.0
ref|XP_002320513.1| predicted protein [Populus trichocarpa] gi|2... 645 0.0
ref|XP_002270665.1| PREDICTED: zinc finger CCCH domain-containin... 630 e-178
ref|XP_002529054.1| RNA binding protein, putative [Ricinus commu... 570 e-160
ref|XP_002276183.1| PREDICTED: zinc finger CCCH domain-containin... 559 e-156
>ref|XP_002534335.1| RNA binding protein, putative [Ricinus communis]
gi|223525472|gb|EEF28048.1| RNA binding protein, putative
[Ricinus communis]
Length = 578
Score = 664 bits (1713), Expect = 0.0
Identities = 340/585 (58%), Positives = 416/585 (71%), Gaps = 4/585 (0%)
Frame = -1
Query: 2177 MDFTAATKVIYERVQSIEPVLVSKIIGYLLLQADGEKEIARFAFGPDQLIYSLIAEAKHH 1998
MDFT +TKV+Y R+Q +EP VSKIIGYLLLQ E+E+ R AF PD LIYSLI +AK
Sbjct: 1 MDFTESTKVVYNRIQKLEPENVSKIIGYLLLQDHSEREMIRLAFSPDNLIYSLITKAKSD 60
Query: 1997 LLXXXXXXXXXXXXXSMNLAPNTDLPMQFTXXXXXXXXXXXXPA-NLHIPSPYWDPLAM- 1824
L +N +P +D+P+QFT PA + S YWD
Sbjct: 61 LGLNKPALSAPISPSQVNTSPVSDIPLQFTPFSPASAHPISSPAASRRTASAYWDAQVTG 120
Query: 1823 -EQPVHNMDFVPAAYSDSVSDDYRFHSQPQFVSLEDQLEAVNPGGHDFSSNIFYPDATLG 1647
+Q V N+DF YSD+V +DYR + QF++L+DQ E + DFSSN FY + LG
Sbjct: 121 DQQQVPNLDFGSPGYSDTVPEDYRLQNHMQFLTLDDQFEFAHSVNSDFSSNYFYSEPALG 180
Query: 1646 XXXXXXXXXXXXXPEFPLKVCHYYNKGYCKHGSNCRYFHGQPVSDSFPQIFSPNSNDSIN 1467
EFPLK+CHY++KGYCKHG+NCRY HG P+ + F QIFS SND N
Sbjct: 181 PRTNRRSPSLP---EFPLKICHYFSKGYCKHGNNCRYVHGHPMPEGFSQIFSTKSNDFSN 237
Query: 1466 EDHFL-PGSXXXXXXXXXXXXKSRRGYPVSIASLPLLYQEKYGRTLQAEGYLTESQRHGK 1290
++H + PGS KSRRG PVSIASLP++Y EKYG+TLQAEGYLTESQRHGK
Sbjct: 238 DEHVVSPGSLEKLEMELAELLKSRRGMPVSIASLPMMYYEKYGKTLQAEGYLTESQRHGK 297
Query: 1289 AGYSLTKLLARLKNSIRLIDRPHGQHAVVLAEDAPRFMEYRSERSDPGGVASGSRQIYLT 1110
AGYSLTKLLARLKNSIR+IDRPHGQH+V+L ED P+++EY ER+DPGG+ +GSRQIYLT
Sbjct: 298 AGYSLTKLLARLKNSIRVIDRPHGQHSVILEEDVPKYLEYVGERNDPGGIVAGSRQIYLT 357
Query: 1109 FPAESTFTEEDVSNYFKNFGPVQDVRIPCQQKRMFGFVTFLYPETVKMILTKGNPHFVCG 930
FPAES FTE DVS YF FGPVQDVRIPCQQKRMFGFVTF++ ETVK IL KGNPH+VCG
Sbjct: 358 FPAESIFTEHDVSIYFSKFGPVQDVRIPCQQKRMFGFVTFIFVETVKQILAKGNPHYVCG 417
Query: 929 ARVLVKPYREKSRIVDRKYAEKCESPLYYPSHFLDMDAELQSAPRLCNSSRLLRKQFMED 750
ARVLVKPYREKSR++DRK++EK + P+Y SHF+D D+EL P + ++SRLLRKQ ME+
Sbjct: 418 ARVLVKPYREKSRLIDRKFSEKLQHPMYNSSHFIDGDSELHPMPTISDNSRLLRKQLMEE 477
Query: 749 HGHALELEGRRLSELQLGQRQLSHQPFFGYSMDDLKVAEAYVDHNDLQSTDRFSYLFDVF 570
+ HALE E RRL E LG + L+HQ + G SMD+LK++E +H + S +RF+YL DV
Sbjct: 478 NEHALEFERRRLLEFHLGPKSLNHQSYLGCSMDELKLSE---EHAEFPSAERFNYLLDVL 534
Query: 569 NNGSTSDDKGRHSSTINYSDHESQGLNLPESPFASPIGSSISTVI 435
NNGS+S+ K R ST NY+D +SQG+NLPESPFASPI S ISTV+
Sbjct: 535 NNGSSSEGKFRRIST-NYNDQDSQGINLPESPFASPIRSGISTVM 578
>ref|XP_002320513.1| predicted protein [Populus trichocarpa] gi|222861286|gb|EEE98828.1|
predicted protein [Populus trichocarpa]
Length = 554
Score = 645 bits (1665), Expect = 0.0
Identities = 331/582 (56%), Positives = 401/582 (68%), Gaps = 1/582 (0%)
Frame = -1
Query: 2177 MDFTAATKVIYERVQSIEPVLVSKIIGYLLLQADGEKEIARFAFGPDQLIYSLIAEAKHH 1998
MDF+ +TKV+Y R+Q IEP V KIIGY+LLQ GE+E+ R AF PD LIY+ I++AK
Sbjct: 1 MDFSESTKVVYNRIQEIEPEFVGKIIGYILLQNHGEREMIRLAFSPDNLIYATISKAKSD 60
Query: 1997 LLXXXXXXXXXXXXXSMNLAPNTDLPMQFTXXXXXXXXXXXXPANLHIPSPYWDPLAMEQ 1818
L +N AP +D+ +QF P + +WD
Sbjct: 61 LGLNKTPVPNPISPSQVNPAPVSDVHLQFIPNTAVSSHPISSPIKIRTAGSFWDAQVT-- 118
Query: 1817 PVHNMDFVPAAYSDSVSDDYRFHSQPQFVSLEDQLEAVNPGGHDFSSNIFYPDATLGXXX 1638
DYR +Q QF++ +DQLE VN DFSS+ FYP+ LG
Sbjct: 119 ------------------DYRLQNQMQFLTSDDQLEFVNS---DFSSSYFYPEPALGPRT 157
Query: 1637 XXXXXXXXXXPEFPLKVCHYYNKGYCKHGSNCRYFHGQPVSDSFPQIFSPNSNDSINEDH 1458
EFP+K+CHY+NKG+CKHG+NCRYFHG P+ +SF QI S NSN+ N++H
Sbjct: 158 SRRSPSLP---EFPVKICHYFNKGFCKHGNNCRYFHGHPMPESFSQILSLNSNEIANDEH 214
Query: 1457 FL-PGSXXXXXXXXXXXXKSRRGYPVSIASLPLLYQEKYGRTLQAEGYLTESQRHGKAGY 1281
F+ PGS KSRRG PVSIASLP++Y EKYGR LQAEGYLTESQRHGKAGY
Sbjct: 215 FISPGSLEKLELELTELLKSRRGVPVSIASLPMMYYEKYGRMLQAEGYLTESQRHGKAGY 274
Query: 1280 SLTKLLARLKNSIRLIDRPHGQHAVVLAEDAPRFMEYRSERSDPGGVASGSRQIYLTFPA 1101
SLTKLLARLKNSIRLIDRPHGQH+V+L ED P+++EY ER+DPGG+ +GSRQIYLTFPA
Sbjct: 275 SLTKLLARLKNSIRLIDRPHGQHSVILTEDVPKYLEYAGERNDPGGIVAGSRQIYLTFPA 334
Query: 1100 ESTFTEEDVSNYFKNFGPVQDVRIPCQQKRMFGFVTFLYPETVKMILTKGNPHFVCGARV 921
ESTFTE+DVSNYF FGPVQDVRIPCQQKRMFGFVTF++ ETVK IL+KGNPH VCGARV
Sbjct: 335 ESTFTEQDVSNYFSKFGPVQDVRIPCQQKRMFGFVTFVFAETVKQILSKGNPHHVCGARV 394
Query: 920 LVKPYREKSRIVDRKYAEKCESPLYYPSHFLDMDAELQSAPRLCNSSRLLRKQFMEDHGH 741
LVKPYREKSR+VDRKYAEK + P +Y HF+D D+EL S PR+C++SRLLRKQ ME+H
Sbjct: 395 LVKPYREKSRLVDRKYAEKIQHPFFYSQHFIDGDSELHSVPRVCDNSRLLRKQLMEEHEQ 454
Query: 740 ALELEGRRLSELQLGQRQLSHQPFFGYSMDDLKVAEAYVDHNDLQSTDRFSYLFDVFNNG 561
ALELE RRLSE QL + L+ + G+SMD+ K++E D S + F+Y FDV NNG
Sbjct: 455 ALELERRRLSEFQLAPKPLARHAYHGHSMDEFKLSEEQAD--QFPSAEHFNYWFDVLNNG 512
Query: 560 STSDDKGRHSSTINYSDHESQGLNLPESPFASPIGSSISTVI 435
STS++K RH+ T +QG+NLPESPFAS IG ISTVI
Sbjct: 513 STSEEKHRHTRTNCSEQDSNQGVNLPESPFASAIGKGISTVI 554
>ref|XP_002270665.1| PREDICTED: zinc finger CCCH domain-containing protein 18-like [Vitis
vinifera]
Length = 572
Score = 630 bits (1625), Expect = e-178
Identities = 344/596 (57%), Positives = 416/596 (69%), Gaps = 16/596 (2%)
Frame = -1
Query: 2177 MDFTAATKVIYERVQSIEPVLVSKIIGYLLLQADGEKEIARFAFGPDQLIYSLIAEAKHH 1998
MDF+ +TKV+Y R+Q +EP VSKIIGYLLLQ GE+++ R AF D I LI +AK
Sbjct: 1 MDFSESTKVVYNRIQKLEPENVSKIIGYLLLQDHGERDMIRRAFTSDNAIQCLINKAKAE 60
Query: 1997 L-LXXXXXXXXXXXXXSMNLAPNTDLPMQFTXXXXXXXXXXXXPANLHIPSP-----YWD 1836
L L +N +P +DLP+QFT PSP YWD
Sbjct: 61 LGLSSKPAVSSPISPPQVNPSPVSDLPLQFTPFSPASARP--------FPSPRPGNSYWD 112
Query: 1835 PLAM--EQPVHNM-DFVPAAYSDSVSDDYRFHSQPQFVSLEDQLEAVNPGGHDFSSNIFY 1665
P +Q VH + DFVP YSDS+ DD+R SQ F+++EDQLE N G +FS + +Y
Sbjct: 113 PQVNGDQQQVHKLGDFVPQGYSDSLPDDFRLQSQIHFLAMEDQLE--NSVGSEFSGSYYY 170
Query: 1664 PDATLGXXXXXXXXXXXXXPEFPLKVCHYYNKGYCKHGSNCRYFHGQPVSDSFPQIFSPN 1485
+ L EFPLKVCHY+NKG+CKHG++CRYFHG P+ +SF QIFSP
Sbjct: 171 AEQALNTRISRRSPSLP---EFPLKVCHYFNKGFCKHGNSCRYFHGHPMLESFSQIFSPG 227
Query: 1484 SNDSINEDH-FLPGSXXXXXXXXXXXXKSRRGYPVSIASLPLLYQEKYGRTLQAEGYLTE 1308
+N+ N+DH F PGS KSRRG PVSIASLP++Y EKYGRTLQAEGYLTE
Sbjct: 228 ANELPNDDHVFPPGSLEKLELELTELLKSRRGCPVSIASLPMMYYEKYGRTLQAEGYLTE 287
Query: 1307 SQRHGKAGYSLTKLLARLKNSIRLIDRPHGQHAVVLAEDAPRFMEYRSERSDPGGVASGS 1128
SQRHGKAGYSLTKLLARLKNSIRLIDRPHGQH+V+LAED P++ME ERSDPG + S
Sbjct: 288 SQRHGKAGYSLTKLLARLKNSIRLIDRPHGQHSVILAEDLPKYMEVNGERSDPGAIVGSS 347
Query: 1127 RQIYLTFPAESTFTEEDVSNYFKNFGPVQDVRIPCQQKRMFGFVTFLYPETVKMILTKGN 948
+QIYLTFPA+STFTE+DVSNYF FGPVQDVRIPCQQKRMFGFVTF++ ETVK ILTKGN
Sbjct: 348 KQIYLTFPADSTFTEQDVSNYFNKFGPVQDVRIPCQQKRMFGFVTFVFAETVKQILTKGN 407
Query: 947 PHFVCGARVLVKPYREK--SRIVDRKYAEKCESPLYYPSHFLDMDAELQSAPRLCNSSRL 774
PH++CGARVLVKPYREK SR VDR+ + P+YY HF+D D+ELQS PR+C++SRL
Sbjct: 408 PHYICGARVLVKPYREKASSRTVDRR-----QHPMYYSPHFIDEDSELQSIPRVCDNSRL 462
Query: 773 LRK-QFMEDHGHALELEGRRLSELQLGQRQLSHQPFFGYSMDDLKVAE--AYVDHNDLQS 603
LRK Q ME+H ALELE RRLSELQL + + P+FGYSMD+ K A+ + + S
Sbjct: 463 LRKQQLMEEHEQALELERRRLSELQLTPK--TAHPYFGYSMDEFKQHSDAAHAEQAEFPS 520
Query: 602 TDRFSYLFDVFNNGSTSDDKGRHSSTINYSDHE-SQGLNLPESPFASPIGSSISTV 438
+R +YL +V NNGSTS+D+ + NY++ E SQGLNLPESPFASPI +SISTV
Sbjct: 521 AERLNYLLEVLNNGSTSEDR-----STNYNEQESSQGLNLPESPFASPIRNSISTV 571
>ref|XP_002529054.1| RNA binding protein, putative [Ricinus communis]
gi|223531534|gb|EEF33365.1| RNA binding protein, putative
[Ricinus communis]
Length = 551
Score = 570 bits (1468), Expect = e-160
Identities = 318/586 (54%), Positives = 388/586 (66%), Gaps = 5/586 (0%)
Frame = -1
Query: 2177 MDFTAATKVIYERVQSIEPVLVSKIIGYLLLQADGEKEIARFAFGPDQLIYSLIAEAKHH 1998
MDF+ T+V++ +++ IEP V+KIIGYLLLQ ++E+ A PD +I +I +AK
Sbjct: 1 MDFSEHTRVVFNKIKKIEPENVTKIIGYLLLQDGSDQEMINLAMSPDVVIQDVIYKAKAE 60
Query: 1997 LLXXXXXXXXXXXXXSMNLAPN-TDLPMQFTXXXXXXXXXXXXPANLHIPSPYWDPLAME 1821
L SMN P ++ QF P + +PS YW+
Sbjct: 61 LNQLALKSAATPLSPSMNSPPAVSEFSSQFRAFSPVSSRSYLSPQHFRVPSTYWESQVAS 120
Query: 1820 QPVHNMDFVPAAYSDSVSDDYRFHSQPQFVSLEDQLEAVNPGGHDFSSNIFYPDATLGXX 1641
+ H+ DFVP Y DS+++ +Q QF+SLEDQLE+VN G F S++FY DA LG
Sbjct: 121 K--HSSDFVPMTYQDSMTE---LQNQAQFLSLEDQLESVNLGNAGFPSDLFYSDAALGSF 175
Query: 1640 XXXXXXXXXXXPEFPLKVCHYYNKGYCKHGSNCRYFHGQPVSDSFPQIFSPNSNDSINED 1461
E +K+CHY+NKGYCKHGSNCRYFHGQ +SDSFP+ F D+INED
Sbjct: 176 RARAGRRYSSLNENSMKICHYFNKGYCKHGSNCRYFHGQ-ISDSFPRTF-----DAINED 229
Query: 1460 H-FLPGSXXXXXXXXXXXXKSRRGYPVSIASLPLLYQEKYGRTLQAEGYLTESQRHGKAG 1284
F PGS KSR+G PVSIASLP+LY EKYG+ LQA+GYLTESQRHGKAG
Sbjct: 230 QIFSPGSLEKLELEIIELLKSRKGNPVSIASLPMLYYEKYGKVLQADGYLTESQRHGKAG 289
Query: 1283 YSLTKLLARLKNSIRLIDRPHGQHAVVLAEDAPRFMEYRSERSDPGGVASGSRQIYLTFP 1104
YSLTKLLARLKNSIRLIDRPHGQHAV+LAED P++ME R +R+DPG + SGSRQIYLTFP
Sbjct: 290 YSLTKLLARLKNSIRLIDRPHGQHAVILAEDVPKYMENRGDRNDPGPIVSGSRQIYLTFP 349
Query: 1103 AESTFTEEDVSNYFKNFGPVQDVRIPCQQKRMFGFVTFLYPETVKMILTKGNPHFVCGAR 924
AESTFTE+DVSNYF FGPV+DVRIPCQQKRMFGFVTF +TVK+IL KGNPHFVC AR
Sbjct: 350 AESTFTEDDVSNYFNKFGPVEDVRIPCQQKRMFGFVTFESADTVKIILAKGNPHFVCNAR 409
Query: 923 VLVKPYREKSRIVDRKYAEKCESPLYYPSHFLDMDAELQSAPRLCNSSRLLRKQFMEDHG 744
VLVKPYRE ++ Y+ SH++DMDAEL S R +SRLLRKQ +E+
Sbjct: 410 VLVKPYRENQSLL-----------XYFSSHYVDMDAELHSMSRGYETSRLLRKQLLEEQE 458
Query: 743 HALELEGR-RLSELQLGQRQLSHQPFFGYSMDDLKVAEAYVDHNDLQSTDRFSYLFDV-- 573
ALELE R RL+EL++ ++ +SH +F Y MD KV+E D F + V
Sbjct: 459 QALELERRQRLAELRI-RKPVSHHSYFDYPMDGFKVSE-----------DNFELPYHVLD 506
Query: 572 FNNGSTSDDKGRHSSTINYSDHESQGLNLPESPFASPIGSSISTVI 435
F NGS +DDK RH T NY+D +SQGLNLPESPFAS I SSIST+I
Sbjct: 507 FINGSGNDDKIRHIET-NYADQDSQGLNLPESPFASAIPSSISTII 551
>ref|XP_002276183.1| PREDICTED: zinc finger CCCH domain-containing protein 18 [Vitis
vinifera] gi|297737542|emb|CBI26743.3| unnamed protein
product [Vitis vinifera]
Length = 544
Score = 559 bits (1440), Expect = e-156
Identities = 311/583 (53%), Positives = 381/583 (65%), Gaps = 3/583 (0%)
Frame = -1
Query: 2177 MDFTAATKVIYERVQSIEPVLVSKIIGYLLLQADGEKEIARFAFGPDQLIYSLIAEAKHH 1998
MDF+ +T V++ R+Q +EP VSKIIGYLL++ + E+ R AFGPD+ I +I K
Sbjct: 1 MDFSESTAVVFNRIQKLEPENVSKIIGYLLVKGFSKGEMIRLAFGPDKAIRMIIEGVKIE 60
Query: 1997 LLXXXXXXXXXXXXXSMNLAPNTDLPMQFTXXXXXXXXXXXXPANLHIPSPYWDPLAMEQ 1818
L L PN P+ L + W P +
Sbjct: 61 L----------------GLIPNPPSPIS------------PHFPPLSPSTGSWFPSSSPS 92
Query: 1817 PVHNMDFVPAAYSDSVSDDYRFHSQPQFVSLEDQLEAVNPGGHDFSSNIFYPDATLGXXX 1638
PV+ ++ A ++ + DY SQP + LE+QLE VNP S + +YP+ +
Sbjct: 93 PVNR--YLQHA-TEQLPKDYSLQSQP--LGLEEQLEQVNPAILGVSGDYYYPETAVENLS 147
Query: 1637 XXXXXXXXXXPEFPLKVCHYYNKGYCKHGSNCRYFHGQPVSDSFPQIFSPNSNDSINEDH 1458
EFP+KVCHY+NKG+CKHG+NCRY H Q FP++ SP +ND N+DH
Sbjct: 148 VRTGPRSLIGSEFPVKVCHYFNKGFCKHGNNCRYLHAQV----FPEVLSPIANDLANDDH 203
Query: 1457 -FLPGSXXXXXXXXXXXXKSRRGYPVSIASLPLLYQEKYGRTLQAEGYLTESQRHGKAGY 1281
F PGS KSRRG PVSIASLP++Y E+YGR LQAEGYLTESQRHGKAGY
Sbjct: 204 IFSPGSIEKLELELTELLKSRRGNPVSIASLPMMYYERYGRGLQAEGYLTESQRHGKAGY 263
Query: 1280 SLTKLLARLKNSIRLIDRPHGQHAVVLAEDAPRFMEYRSERSDPGGVASGSRQIYLTFPA 1101
SLTKLLARL+ +IRLIDRPHGQH+V+LAED P++ME RSERSDPG + SGSRQIYLTFPA
Sbjct: 264 SLTKLLARLR-TIRLIDRPHGQHSVILAEDVPKYMESRSERSDPGPIVSGSRQIYLTFPA 322
Query: 1100 ESTFTEEDVSNYFKNFGPVQDVRIPCQQKRMFGFVTFLYPETVKMILTKGNPHFVCGARV 921
ESTFTEEDVS+YF FG V+DVRIPCQQKRMFGFVTF +TVK IL KG+PH+VCGARV
Sbjct: 323 ESTFTEEDVSDYFSTFGLVEDVRIPCQQKRMFGFVTFDSSDTVKSILAKGSPHYVCGARV 382
Query: 920 LVKPYREKSRIVDRKYAEKCESPLYYPSHFLDMDAELQSAPRLCNSSRLLRKQFMEDHGH 741
LVKPYREK R DRKY EK ES +YYP + DMD+EL PR +SRLLRKQ ME+
Sbjct: 383 LVKPYREKPRTGDRKYLEKFESSMYYPLQYADMDSELHMMPRGMETSRLLRKQIMEEQEF 442
Query: 740 A--LELEGRRLSELQLGQRQLSHQPFFGYSMDDLKVAEAYVDHNDLQSTDRFSYLFDVFN 567
A LE E RRLS+LQL + L++Q GYS+D+LKV EA+ +H+ + +Y DV N
Sbjct: 443 AQDLEFETRRLSKLQLARNPLANQLHHGYSLDELKVLEAHANHSKFPTVVHSNYPLDVSN 502
Query: 566 NGSTSDDKGRHSSTINYSDHESQGLNLPESPFASPIGSSISTV 438
NGSTSDDK + N DH+S GL LP+SPFA PIGSSIST+
Sbjct: 503 NGSTSDDKPWRAVN-NPIDHKSSGLELPDSPFAFPIGSSISTI 544