BLASTX nr result

ID: Cimicifuga21_contig00008765 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00008765
         (710 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002279682.1| PREDICTED: autophagy-related protein 8C isof...   196   3e-48
ref|XP_002529905.1| gaba(A) receptor-associated protein, putativ...   194   2e-47
ref|XP_002529904.1| gaba(A) receptor-associated protein, putativ...   194   2e-47
ref|NP_001234630.1| autophagy 8a [Solanum lycopersicum] gi|32402...   193   3e-47
ref|XP_002279664.1| PREDICTED: autophagy-related protein 8C isof...   193   3e-47

>ref|XP_002279682.1| PREDICTED: autophagy-related protein 8C isoform 2 [Vitis vinifera]
          Length = 125

 Score =  196 bits (499), Expect = 3e-48
 Identities = 99/122 (81%), Positives = 104/122 (85%)
 Frame = +1

Query: 106 TFNFAMAKNPFKLEHSXXXXXXXXXXXXXKYPDRIPVIVEKAERSDISDIDKKKYLVPAD 285
           TF  +MA++ FKLEH              KYPDRIPVIVEKAERSDI DIDKKKYLVPAD
Sbjct: 2   TFRNSMARSSFKLEHPLERRQAEAARIREKYPDRIPVIVEKAERSDIPDIDKKKYLVPAD 61

Query: 286 LTVGQFVYVVRKRIKLSAEKAIFIFVKNILPPTAAMMSAIYEENKDEDGFLYMTYSGENT 465
           LTVGQFVYV+RKRIKLSAEKAIFIFVKN+LPPTAAMMSAIYEENKDEDGFLYMTYSGENT
Sbjct: 62  LTVGQFVYVIRKRIKLSAEKAIFIFVKNVLPPTAAMMSAIYEENKDEDGFLYMTYSGENT 121

Query: 466 FG 471
           FG
Sbjct: 122 FG 123


>ref|XP_002529905.1| gaba(A) receptor-associated protein, putative [Ricinus communis]
           gi|223530582|gb|EEF32459.1| gaba(A) receptor-associated
           protein, putative [Ricinus communis]
          Length = 125

 Score =  194 bits (492), Expect = 2e-47
 Identities = 99/117 (84%), Positives = 101/117 (86%)
 Frame = +1

Query: 121 MAKNPFKLEHSXXXXXXXXXXXXXKYPDRIPVIVEKAERSDISDIDKKKYLVPADLTVGQ 300
           MAK+ FKLEH              KYPDRIPVIVE+AERSDI DIDKKKYLVPADLTVGQ
Sbjct: 1   MAKSSFKLEHPLERRQAESARIREKYPDRIPVIVERAERSDIPDIDKKKYLVPADLTVGQ 60

Query: 301 FVYVVRKRIKLSAEKAIFIFVKNILPPTAAMMSAIYEENKDEDGFLYMTYSGENTFG 471
           FVYVVRKRIKLSAEKAIFIFVKNILPPTAAMMSAIYEENKDEDGFLYMTYSGENTFG
Sbjct: 61  FVYVVRKRIKLSAEKAIFIFVKNILPPTAAMMSAIYEENKDEDGFLYMTYSGENTFG 117


>ref|XP_002529904.1| gaba(A) receptor-associated protein, putative [Ricinus communis]
           gi|223530581|gb|EEF32458.1| gaba(A) receptor-associated
           protein, putative [Ricinus communis]
          Length = 120

 Score =  194 bits (492), Expect = 2e-47
 Identities = 99/117 (84%), Positives = 101/117 (86%)
 Frame = +1

Query: 121 MAKNPFKLEHSXXXXXXXXXXXXXKYPDRIPVIVEKAERSDISDIDKKKYLVPADLTVGQ 300
           MAK+ FKLEH              KYPDRIPVIVE+AERSDI DIDKKKYLVPADLTVGQ
Sbjct: 1   MAKSSFKLEHPLERRQAESARIREKYPDRIPVIVERAERSDIPDIDKKKYLVPADLTVGQ 60

Query: 301 FVYVVRKRIKLSAEKAIFIFVKNILPPTAAMMSAIYEENKDEDGFLYMTYSGENTFG 471
           FVYVVRKRIKLSAEKAIFIFVKNILPPTAAMMSAIYEENKDEDGFLYMTYSGENTFG
Sbjct: 61  FVYVVRKRIKLSAEKAIFIFVKNILPPTAAMMSAIYEENKDEDGFLYMTYSGENTFG 117


>ref|NP_001234630.1| autophagy 8a [Solanum lycopersicum] gi|324029060|gb|ADY16677.1|
           autophagy 8a [Solanum lycopersicum]
          Length = 119

 Score =  193 bits (490), Expect = 3e-47
 Identities = 99/117 (84%), Positives = 101/117 (86%)
 Frame = +1

Query: 121 MAKNPFKLEHSXXXXXXXXXXXXXKYPDRIPVIVEKAERSDISDIDKKKYLVPADLTVGQ 300
           MAK+ FKLEH              KYPDRIPVIVEKAERSDI DIDKKKYLVPADLTVGQ
Sbjct: 1   MAKSSFKLEHPLERRQAEAARIREKYPDRIPVIVEKAERSDIPDIDKKKYLVPADLTVGQ 60

Query: 301 FVYVVRKRIKLSAEKAIFIFVKNILPPTAAMMSAIYEENKDEDGFLYMTYSGENTFG 471
           FVYVVRKRIKLSAEKAIFIFVKNILPPTAAMMSAIYEE+KDEDGFLYMTYSGENTFG
Sbjct: 61  FVYVVRKRIKLSAEKAIFIFVKNILPPTAAMMSAIYEEHKDEDGFLYMTYSGENTFG 117


>ref|XP_002279664.1| PREDICTED: autophagy-related protein 8C isoform 1 [Vitis vinifera]
           gi|297737448|emb|CBI26649.3| unnamed protein product
           [Vitis vinifera]
          Length = 119

 Score =  193 bits (490), Expect = 3e-47
 Identities = 97/117 (82%), Positives = 101/117 (86%)
 Frame = +1

Query: 121 MAKNPFKLEHSXXXXXXXXXXXXXKYPDRIPVIVEKAERSDISDIDKKKYLVPADLTVGQ 300
           MA++ FKLEH              KYPDRIPVIVEKAERSDI DIDKKKYLVPADLTVGQ
Sbjct: 1   MARSSFKLEHPLERRQAEAARIREKYPDRIPVIVEKAERSDIPDIDKKKYLVPADLTVGQ 60

Query: 301 FVYVVRKRIKLSAEKAIFIFVKNILPPTAAMMSAIYEENKDEDGFLYMTYSGENTFG 471
           FVYV+RKRIKLSAEKAIFIFVKN+LPPTAAMMSAIYEENKDEDGFLYMTYSGENTFG
Sbjct: 61  FVYVIRKRIKLSAEKAIFIFVKNVLPPTAAMMSAIYEENKDEDGFLYMTYSGENTFG 117


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