BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00008738
         (1378 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002274016.1| PREDICTED: mitochondrial ubiquitin ligase ac...   484   e-134
ref|XP_003552078.1| PREDICTED: mitochondrial ubiquitin ligase ac...   475   e-131
ref|XP_003627295.1| Baculoviral IAP repeat-containing protein [M...   473   e-131
ref|XP_003520919.1| PREDICTED: mitochondrial ubiquitin ligase ac...   466   e-129
ref|XP_002521326.1| ubiquitin-protein ligase, putative [Ricinus ...   458   e-126

>ref|XP_002274016.1| PREDICTED: mitochondrial ubiquitin ligase activator of nfkb 1 [Vitis
            vinifera] gi|297743001|emb|CBI35868.3| unnamed protein
            product [Vitis vinifera]
          Length = 391

 Score =  484 bits (1246), Expect = e-134
 Identities = 238/395 (60%), Positives = 296/395 (74%), Gaps = 7/395 (1%)
 Frame = +1

Query: 55   MSSASDRAINLLFQLALATDGAVAGFALACGAIQAWINFRYNSSALHKIDKAKAVSVSDL 234
            MS+    A  +L Q+ALA DGA+ G ALA  A++++I     SSAL +ID++ +  VSDL
Sbjct: 1    MSAHDQAAAAILAQVALAADGAILGLALAYVAVRSFIRLSSTSSALRQIDQSPSFRVSDL 60

Query: 235  RXXXXXXXXXXXXXXK-----LVIVRGLVEAKSVIDGNWPSSRPNVLVSYNSGEKGVVLQ 399
            R                    LV+VRG VEAKS IDGNW S RPNVLVS+ SGEKGV+LQ
Sbjct: 61   RSLLSPSSDDESDQSTSSDGLLVVVRGTVEAKSAIDGNWKSLRPNVLVSHESGEKGVILQ 120

Query: 400  KTQTCIYNDSKGIFWWTNDLRMIFGKSWKNPKSTSLRTIPFVLV--GSAGQSDYVVVNLD 573
            +TQTCIYN+ +G F WT+D+R +F +SWK  +STSLRT+PF+LV  G   QSDYV+VN+D
Sbjct: 121  RTQTCIYNEWRGFFGWTSDIRTLFARSWKEKESTSLRTVPFILVEGGRWPQSDYVIVNMD 180

Query: 574  GSTHSLPLTTVYHHLQPVPTSPYTFLQAIAGHAYPVGLLDEEKLLPIGKEISAVGVCTSQ 753
            GS H LPLTTVYH LQPV  SPYTFLQA+ GH YPVGLLDEEKLLP+GKEI+AVG+C+ +
Sbjct: 181  GSRHPLPLTTVYHQLQPVNASPYTFLQALFGHDYPVGLLDEEKLLPLGKEITAVGICSLK 240

Query: 754  DGKPQIRACEDLPYFLSDMTKDQMLVDLAYKTKILFWSGIILGSVSVGVLGYAFTKNWRR 933
            +G P+I++C+DLPYFLS+M+KDQM+VDL +K+K+LFWSG+ILGSVS+GVLGYA  +NW R
Sbjct: 241  NGIPEIKSCKDLPYFLSEMSKDQMVVDLVFKSKVLFWSGVILGSVSIGVLGYAVVRNWNR 300

Query: 934  WKEWIQQRQLQHSRNNXXXXXXXXXXXGQVDEETEDVPDGQLCVICLTRRKRSAFVPCGH 1113
            WKEW QQR ++                   +++  DVPDG+LCVICL RRKRSAFVPCGH
Sbjct: 301  WKEWRQQRGVRPPSQAVTDDTDTQI----AEDDAGDVPDGELCVICLMRRKRSAFVPCGH 356

Query: 1114 LVCCPRCALSVERDTAPKCPLCRQTIRTSVRVYDS 1218
            LVCC RCALSVER+ +PKCP+CRQ IR+SVR+Y S
Sbjct: 357  LVCCQRCALSVERELSPKCPVCRQIIRSSVRIYGS 391


>ref|XP_003552078.1| PREDICTED: mitochondrial ubiquitin ligase activator of nfkb 1-like
            [Glycine max]
          Length = 387

 Score =  475 bits (1222), Expect = e-131
 Identities = 232/393 (59%), Positives = 291/393 (74%), Gaps = 5/393 (1%)
 Frame = +1

Query: 55   MSSASDRAINLLFQLALATDGAVAGFALACGAIQAWINFRYNSSALHKIDKAKAVSVSDL 234
            MS      ++LL QLAL+ DGAV GFALA  A++    F   SSAL K+ +A ++SVSDL
Sbjct: 1    MSHQEQALVSLLSQLALSLDGAVLGFALAYAAVRTLFKFTATSSALRKLRRAPSLSVSDL 60

Query: 235  RXXXXXXXXXXXXXXK---LVIVRGLVEAKSVIDGNWPSSRPNVLVSYNSGEKGVVLQKT 405
            R              K   +VIVRG V+AKS +DG W + RP VLVS  SG+KGV+LQ+T
Sbjct: 61   RSLLAEIPSDGDGNSKGGIIVIVRGTVDAKSAVDGTWKTLRPGVLVSRESGDKGVILQRT 120

Query: 406  QTCIYNDSKGIFWWTNDLRMIFGKSWKNPKSTSLRTIPFVL--VGSAGQSDYVVVNLDGS 579
            QTCIYN+ KG+F WT+DLR IF +SW+  +STSLR +PF+L  VG    ++YVVVN+DGS
Sbjct: 121  QTCIYNEWKGLFGWTSDLRAIFARSWRQQESTSLRKVPFLLTDVGRRPNAEYVVVNMDGS 180

Query: 580  THSLPLTTVYHHLQPVPTSPYTFLQAIAGHAYPVGLLDEEKLLPIGKEISAVGVCTSQDG 759
             H LPLTTVYH LQP+  SPYTFLQA+ GH YPVGLLDEEK+LP+GK+I+AVG+C+ ++G
Sbjct: 181  RHPLPLTTVYHKLQPITASPYTFLQALFGHEYPVGLLDEEKILPLGKDITAVGLCSLKNG 240

Query: 760  KPQIRACEDLPYFLSDMTKDQMLVDLAYKTKILFWSGIILGSVSVGVLGYAFTKNWRRWK 939
              +I++C+ LPYFLSD++KDQM++DL+ KTKILFW GI LGS+SVGVLGYA  +NW +WK
Sbjct: 241  IAEIKSCKYLPYFLSDLSKDQMIMDLSIKTKILFWGGIALGSMSVGVLGYAVVRNWNKWK 300

Query: 940  EWIQQRQLQHSRNNXXXXXXXXXXXGQVDEETEDVPDGQLCVICLTRRKRSAFVPCGHLV 1119
            +W QQRQLQ  R              Q+D+E ED PDGQLCVICL RR+RS F+PCGHLV
Sbjct: 301  QWKQQRQLQQQRQ------AVSDVEPQMDDEIEDAPDGQLCVICLMRRRRSVFIPCGHLV 354

Query: 1120 CCPRCALSVERDTAPKCPLCRQTIRTSVRVYDS 1218
            CC  CA+SVER+ APKCP+CRQ IR SVR+Y+S
Sbjct: 355  CCQGCAISVEREVAPKCPVCRQEIRDSVRIYES 387


>ref|XP_003627295.1| Baculoviral IAP repeat-containing protein [Medicago truncatula]
            gi|66947626|emb|CAJ00009.1| C3HC4 zinc finger containing
            protein [Medicago truncatula] gi|355521317|gb|AET01771.1|
            Baculoviral IAP repeat-containing protein [Medicago
            truncatula]
          Length = 383

 Score =  473 bits (1217), Expect = e-131
 Identities = 231/390 (59%), Positives = 293/390 (75%), Gaps = 2/390 (0%)
 Frame = +1

Query: 55   MSSASDRAINLLFQLALATDGAVAGFALACGAIQAWINFRYNSSALHKIDKAKAVSVSDL 234
            MSS     ++LL QLAL+ DGAV GFA+A  A+++   F   S+AL KI  A +VSVSDL
Sbjct: 1    MSSQEQALVSLLSQLALSFDGAVLGFAVAYVAVRSIRKFTLTSAALRKITAAPSVSVSDL 60

Query: 235  RXXXXXXXXXXXXXXKLVIVRGLVEAKSVIDGNWPSSRPNVLVSYNSGEKGVVLQKTQTC 414
            R              K+VIVRG V+AK+V+DG+W +  P VLVS  SG+KGVVLQ+TQTC
Sbjct: 61   RSLLTETDENSDEG-KIVIVRGTVDAKNVVDGSWKALWPGVLVSSESGDKGVVLQRTQTC 119

Query: 415  IYNDSKGIFWWTNDLRMIFGKSWKNPKSTSLRTIPFVL--VGSAGQSDYVVVNLDGSTHS 588
            IYN+ KG+F WT+DLR +F +SW+  +STSLR IPFVL  VG     +YVVVN+DGS+H 
Sbjct: 120  IYNEWKGLFGWTSDLRALFLRSWRQQESTSLRKIPFVLIDVGRPSNPEYVVVNMDGSSHP 179

Query: 589  LPLTTVYHHLQPVPTSPYTFLQAIAGHAYPVGLLDEEKLLPIGKEISAVGVCTSQDGKPQ 768
            LPLTTVYH LQPV   PYTFLQA+ GH YPVGLLDEEK+LP+GK++SAVG+C+ ++G  +
Sbjct: 180  LPLTTVYHRLQPVNPPPYTFLQALFGHEYPVGLLDEEKILPLGKDVSAVGLCSLRNGIAE 239

Query: 769  IRACEDLPYFLSDMTKDQMLVDLAYKTKILFWSGIILGSVSVGVLGYAFTKNWRRWKEWI 948
            I+AC DLPY+LSD++KDQM+VDL++KTK+LFWSGI+LGS+SVG++GYA  +NW +WK+W 
Sbjct: 240  IKACNDLPYYLSDLSKDQMIVDLSFKTKLLFWSGILLGSMSVGIIGYAVVRNWNKWKQWK 299

Query: 949  QQRQLQHSRNNXXXXXXXXXXXGQVDEETEDVPDGQLCVICLTRRKRSAFVPCGHLVCCP 1128
            QQRQLQ  R                D+E EDVPDGQLCVICL RR+RS F+PCGHLVCC 
Sbjct: 300  QQRQLQQRRQQPIEPVP------PTDDEIEDVPDGQLCVICLMRRRRSVFIPCGHLVCCQ 353

Query: 1129 RCALSVERDTAPKCPLCRQTIRTSVRVYDS 1218
             CA+SVE + APKCP+CRQ +R SVR+++S
Sbjct: 354  GCAISVESEVAPKCPVCRQEVRDSVRIFES 383


>ref|XP_003520919.1| PREDICTED: mitochondrial ubiquitin ligase activator of nfkb 1-like
            [Glycine max]
          Length = 388

 Score =  466 bits (1198), Expect = e-129
 Identities = 231/394 (58%), Positives = 289/394 (73%), Gaps = 6/394 (1%)
 Frame = +1

Query: 55   MSSASDRAINLLFQLALATDGAVAGFALACGAIQAWINFRYNSSALHKIDKAKAVSVSDL 234
            MS      ++LL QLAL+ DGAV G ALA  A++    F   S+AL K+ +A +VSVSDL
Sbjct: 1    MSHQEQAFVSLLSQLALSFDGAVLGLALAYAAVRTLFKFTATSAALRKLHRAPSVSVSDL 60

Query: 235  RXXXXXXXXXXXXXX---KLVIVRGLVEAKSVIDGN-WPSSRPNVLVSYNSGEKGVVLQK 402
            R                  +VIVRG V+AKS ++G  W + RP VLVS  SG+K V+LQ+
Sbjct: 61   RSLLAEIPSDADGNSDGGNIVIVRGTVDAKSTVEGGTWKTLRPGVLVSRESGDKSVILQR 120

Query: 403  TQTCIYNDSKGIFWWTNDLRMIFGKSWKNPKSTSLRTIPFVL--VGSAGQSDYVVVNLDG 576
            TQTCIYN+ KG+F WT+DLR IF +SW+  +STSLR +PFVL  VG    ++YVVVN+DG
Sbjct: 121  TQTCIYNEWKGLFGWTSDLRAIFARSWRQQESTSLRKVPFVLIDVGRWPNAEYVVVNMDG 180

Query: 577  STHSLPLTTVYHHLQPVPTSPYTFLQAIAGHAYPVGLLDEEKLLPIGKEISAVGVCTSQD 756
            S H LPL+TVYH LQP+  SPYTFLQA+ GH YPVGLLDEEK+LP+GK I+AVG+C+ ++
Sbjct: 181  SRHPLPLSTVYHKLQPITASPYTFLQALFGHEYPVGLLDEEKILPLGKNITAVGLCSLKN 240

Query: 757  GKPQIRACEDLPYFLSDMTKDQMLVDLAYKTKILFWSGIILGSVSVGVLGYAFTKNWRRW 936
            G  +I++C+DLPYFLSD++KDQM+VDL+ KTKILFW GI LGS+SVGVLGYA  +NW +W
Sbjct: 241  GIAEIKSCKDLPYFLSDLSKDQMIVDLSSKTKILFWGGIALGSMSVGVLGYAVVRNWNKW 300

Query: 937  KEWIQQRQLQHSRNNXXXXXXXXXXXGQVDEETEDVPDGQLCVICLTRRKRSAFVPCGHL 1116
            K+W QQRQLQ  R              Q+D+E EDVPDGQLCVICL RR+RS F+PCGHL
Sbjct: 301  KQWKQQRQLQQQRQ------AVSDVEPQMDDEIEDVPDGQLCVICLMRRRRSVFIPCGHL 354

Query: 1117 VCCPRCALSVERDTAPKCPLCRQTIRTSVRVYDS 1218
            VCC  CA+SVER+ APKCP+CRQ IR SVR+Y+S
Sbjct: 355  VCCQGCAISVEREVAPKCPVCRQEIRDSVRIYES 388


>ref|XP_002521326.1| ubiquitin-protein ligase, putative [Ricinus communis]
            gi|223539404|gb|EEF40994.1| ubiquitin-protein ligase,
            putative [Ricinus communis]
          Length = 387

 Score =  458 bits (1178), Expect = e-126
 Identities = 225/391 (57%), Positives = 286/391 (73%), Gaps = 4/391 (1%)
 Frame = +1

Query: 55   MSSASDRAINLLFQLALATDGAVAGFALACGAIQAWINFRYNSSALHKIDKAKAVSVSDL 234
            MSS      +L+ QLAL+ DGA  G  +A  A+++ + F  NS AL KI  A  V VSD+
Sbjct: 1    MSSHEQALASLVSQLALSFDGAFLGVVVALTAVRSILKFASNSKALRKIRNAPTVKVSDI 60

Query: 235  RXXXXXXXXXXXXXXKLVIVRGLVEAKSVIDGNWPSSRPN--VLVSYNSGEKGVVLQKTQ 408
            R              KLVIVRG VEAKS +DGNW S  PN  VLV++ SG+K V++Q+ Q
Sbjct: 61   RSVLEVSDETQDQ--KLVIVRGQVEAKSAVDGNWKSLIPNNNVLVAHESGDKAVIVQRIQ 118

Query: 409  TCIYNDSKGIFWWTNDLRMIFGKSWKNPKSTSLRTIPFVLV--GSAGQSDYVVVNLDGST 582
            TCIYN+ KG F WT+D+R IFG+SW+  +ST  R++PFVLV  G   QSDYV+VNLDGS 
Sbjct: 119  TCIYNEWKGFFGWTSDIRAIFGRSWREQESTLSRSVPFVLVEAGRWPQSDYVIVNLDGSR 178

Query: 583  HSLPLTTVYHHLQPVPTSPYTFLQAIAGHAYPVGLLDEEKLLPIGKEISAVGVCTSQDGK 762
            H LPLTTVYH LQP+  SPYTFLQA  G+ YPVGLLDEEK+LP+GKEI+AVG+C S++G 
Sbjct: 179  HPLPLTTVYHQLQPIDASPYTFLQAFFGYEYPVGLLDEEKILPLGKEINAVGLCGSKNGI 238

Query: 763  PQIRACEDLPYFLSDMTKDQMLVDLAYKTKILFWSGIILGSVSVGVLGYAFTKNWRRWKE 942
             +I +C+DLP+FLSD++K+QM+VDLA+KTK+LFWSG++LGS S+ +LGYA  +NW RWK 
Sbjct: 239  LEITSCKDLPFFLSDLSKEQMVVDLAFKTKVLFWSGVVLGSFSICILGYAAVRNWNRWKA 298

Query: 943  WIQQRQLQHSRNNXXXXXXXXXXXGQVDEETEDVPDGQLCVICLTRRKRSAFVPCGHLVC 1122
            W QQRQ Q   N+             V+EET DVPDGQLCVICL RR+R+AF+PCGHLVC
Sbjct: 299  WRQQRQFQQQSNSVSDADVSQI---DVEEETVDVPDGQLCVICLMRRRRAAFIPCGHLVC 355

Query: 1123 CPRCALSVERDTAPKCPLCRQTIRTSVRVYD 1215
            C  CA+SVER+ +PKCPLCRQ +R S+R+++
Sbjct: 356  CQICAISVEREVSPKCPLCRQAVRNSIRIFE 386