BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00008721
         (1724 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI34639.3| unnamed protein product [Vitis vinifera]              189   2e-45
ref|XP_002277144.1| PREDICTED: nuclear pore complex protein Nup9...   189   2e-45
ref|XP_004173129.1| PREDICTED: nuclear pore complex protein Nup9...   161   6e-37
ref|XP_004148101.1| PREDICTED: nucleoporin nup189-like [Cucumis ...   161   6e-37
dbj|BAF98996.1| nucleoporin 98 [Daucus carota]                        161   6e-37

>emb|CBI34639.3| unnamed protein product [Vitis vinifera]
          Length = 1047

 Score =  189 bits (481), Expect = 2e-45
 Identities = 114/230 (49%), Positives = 127/230 (55%), Gaps = 12/230 (5%)
 Frame = -2

Query: 1717 FGQSAFGGQQRGGSRVAAYSPTAEIDGGSSTQPTGKLESISAMPVYKDKSHEELRWEDYQ 1538
            FGQSAFGGQ RGGSRVAAY+PT E+D GS TQP GKLESISAMPVYKDKSHEELRWEDYQ
Sbjct: 326  FGQSAFGGQ-RGGSRVAAYTPTTEVDSGSGTQPVGKLESISAMPVYKDKSHEELRWEDYQ 384

Query: 1537 LGDKGGPSPAVQPAGGIGFSAPAAQSNPFGAXXXXXXXXTNPFASKPST---------FX 1385
            LGDKGGP+PA Q  GG+GF A   QSNPF A         NPF+S  S+         F 
Sbjct: 385  LGDKGGPAPASQSTGGVGFGASNTQSNPFAASPAFGQSSANPFSSSTSSNPFAPRTPAFG 444

Query: 1384 XXXXXXXXXXXXXXXXXXXXXXANPFGATSSSTQSLFXXXXXXXXXXXXXXXXXXXXXXX 1205
                                  +NPFG+TSS+T S+F                       
Sbjct: 445  SSGFGGSSTPAFSSSPFGASSTSNPFGSTSSATPSIF-GASSTPPFGASSSPSLFGASSS 503

Query: 1204 XXXXXXXXXXXXATAPGTTAAFG---NYGYTQSAGLFQSTTPSLGQTNSA 1064
                          A GT  AFG   N+G TQS+ LFQS+TPSLGQT SA
Sbjct: 504  SGFGSSPSIFGSTPAQGTAPAFGSGLNFGNTQSSPLFQSSTPSLGQTASA 553



 Score =  126 bits (316), Expect = 2e-26
 Identities = 63/89 (70%), Positives = 70/89 (78%), Gaps = 1/89 (1%)
 Frame = -2

Query: 877 GSSPYGASPSPFGTQSSS-GGQAATSTFGSTLFGESAFGGQQRGSSRVAAYSPTAEINGG 701
           GSSP+G + SPFG QSS  G QA T TFG T FG+SAFGGQ RG SRVAAY+PT E++ G
Sbjct: 294 GSSPFGTATSPFGAQSSPFGAQATTPTFGGTGFGQSAFGGQ-RGGSRVAAYTPTTEVDSG 352

Query: 700 SSAQPTGKFESISVMPVYEDKSHEELRWE 614
           S  QP GK ESIS MPVY+DKSHEELRWE
Sbjct: 353 SGTQPVGKLESISAMPVYKDKSHEELRWE 381


>ref|XP_002277144.1| PREDICTED: nuclear pore complex protein Nup98-Nup96-like isoform 1
            [Vitis vinifera]
          Length = 1013

 Score =  189 bits (481), Expect = 2e-45
 Identities = 114/230 (49%), Positives = 127/230 (55%), Gaps = 12/230 (5%)
 Frame = -2

Query: 1717 FGQSAFGGQQRGGSRVAAYSPTAEIDGGSSTQPTGKLESISAMPVYKDKSHEELRWEDYQ 1538
            FGQSAFGGQ RGGSRVAAY+PT E+D GS TQP GKLESISAMPVYKDKSHEELRWEDYQ
Sbjct: 309  FGQSAFGGQ-RGGSRVAAYTPTTEVDSGSGTQPVGKLESISAMPVYKDKSHEELRWEDYQ 367

Query: 1537 LGDKGGPSPAVQPAGGIGFSAPAAQSNPFGAXXXXXXXXTNPFASKPST---------FX 1385
            LGDKGGP+PA Q  GG+GF A   QSNPF A         NPF+S  S+         F 
Sbjct: 368  LGDKGGPAPASQSTGGVGFGASNTQSNPFAASPAFGQSSANPFSSSTSSNPFAPRTPAFG 427

Query: 1384 XXXXXXXXXXXXXXXXXXXXXXANPFGATSSSTQSLFXXXXXXXXXXXXXXXXXXXXXXX 1205
                                  +NPFG+TSS+T S+F                       
Sbjct: 428  SSGFGGSSTPAFSSSPFGASSTSNPFGSTSSATPSIF-GASSTPPFGASSSPSLFGASSS 486

Query: 1204 XXXXXXXXXXXXATAPGTTAAFG---NYGYTQSAGLFQSTTPSLGQTNSA 1064
                          A GT  AFG   N+G TQS+ LFQS+TPSLGQT SA
Sbjct: 487  SGFGSSPSIFGSTPAQGTAPAFGSGLNFGNTQSSPLFQSSTPSLGQTASA 536



 Score =  130 bits (328), Expect = 8e-28
 Identities = 73/123 (59%), Positives = 80/123 (65%), Gaps = 2/123 (1%)
 Frame = -2

Query: 976 PLFGASF-PALGAXXXXXXXXXXXXXXXXXXXXFGSSPYGASPSPFGTQSSS-GGQAATS 803
           P FGAS  PA GA                    FGSSP+G + SPFG QSS  G QA T 
Sbjct: 243 PAFGASSTPAFGASSTPSFSFGSTPAFGQSTAAFGSSPFGTATSPFGAQSSPFGAQATTP 302

Query: 802 TFGSTLFGESAFGGQQRGSSRVAAYSPTAEINGGSSAQPTGKFESISVMPVYEDKSHEEL 623
           TFG T FG+SAFGGQ RG SRVAAY+PT E++ GS  QP GK ESIS MPVY+DKSHEEL
Sbjct: 303 TFGGTGFGQSAFGGQ-RGGSRVAAYTPTTEVDSGSGTQPVGKLESISAMPVYKDKSHEEL 361

Query: 622 RWE 614
           RWE
Sbjct: 362 RWE 364


>ref|XP_004173129.1| PREDICTED: nuclear pore complex protein Nup98-Nup96-like, partial
            [Cucumis sativus]
          Length = 436

 Score =  161 bits (407), Expect = 6e-37
 Identities = 104/232 (44%), Positives = 120/232 (51%), Gaps = 12/232 (5%)
 Frame = -2

Query: 1723 NAFGQSAFGGQQRGGSRVAAYSPTAEIDGGS-STQPTGKLESISAMPVYKDKSHEELRWE 1547
            + FGQ+ FGGQ RGGSRV  Y+PT E D GS STQ  GKLESISAMPVYKDKSHEELRWE
Sbjct: 123  SGFGQAGFGGQ-RGGSRVTPYAPTPEPDPGSGSTQAAGKLESISAMPVYKDKSHEELRWE 181

Query: 1546 DYQLGDKGGPSPAVQPAGGIGFSAPAAQSNPFGA--------XXXXXXXXTNPFASKPST 1391
            DYQLGDKGGP PA Q A G+GF  P  Q NP  +                TNPFA KPS 
Sbjct: 182  DYQLGDKGGPLPAGQSASGVGFGVPGGQPNPVSSSTFSQSSPNPFSTSTPTNPFAPKPSG 241

Query: 1390 FXXXXXXXXXXXXXXXXXXXXXXXANPFGATSSSTQSLFXXXXXXXXXXXXXXXXXXXXX 1211
            F                       +NPF +T++++ S F                     
Sbjct: 242  F--GTFGPSTTFSFNSSAFAPSTPSNPFASTTAASTSAF-----LSSTTSQFGSSSLFSS 294

Query: 1210 XXXXXXXXXXXXXXATAPGTTAAFG---NYGYTQSAGLFQSTTPSLGQTNSA 1064
                           T+PGT   F    N+G TQS+ LFQSTTP++GQT SA
Sbjct: 295  SNTQPLASQSAFSSTTSPGTNLTFPSSLNFGNTQSSSLFQSTTPAIGQTGSA 346



 Score =  110 bits (276), Expect = 9e-22
 Identities = 65/123 (52%), Positives = 76/123 (61%), Gaps = 2/123 (1%)
 Frame = -2

Query: 976 PLFGASF-PALGAXXXXXXXXXXXXXXXXXXXXFGSSPYGASPSPFGTQSSSGGQAATST 800
           P FGAS  PA GA                    FGSS +G + SPFG QSS  G  +TS+
Sbjct: 60  PAFGASSAPAFGASSTPSFSFGSTPAFGQSTSGFGSSTFGTNTSPFGAQSSPFGAQSTSS 119

Query: 799 FGSTLFGESAFGGQQRGSSRVAAYSPTAEINGGS-SAQPTGKFESISVMPVYEDKSHEEL 623
           FG++ FG++ FGG QRG SRV  Y+PT E + GS S Q  GK ESIS MPVY+DKSHEEL
Sbjct: 120 FGTSGFGQAGFGG-QRGGSRVTPYAPTPEPDPGSGSTQAAGKLESISAMPVYKDKSHEEL 178

Query: 622 RWE 614
           RWE
Sbjct: 179 RWE 181


>ref|XP_004148101.1| PREDICTED: nucleoporin nup189-like [Cucumis sativus]
          Length = 994

 Score =  161 bits (407), Expect = 6e-37
 Identities = 104/232 (44%), Positives = 120/232 (51%), Gaps = 12/232 (5%)
 Frame = -2

Query: 1723 NAFGQSAFGGQQRGGSRVAAYSPTAEIDGGS-STQPTGKLESISAMPVYKDKSHEELRWE 1547
            + FGQ+ FGGQ RGGSRV  Y+PT E D GS STQ  GKLESISAMPVYKDKSHEELRWE
Sbjct: 315  SGFGQAGFGGQ-RGGSRVTPYAPTPEPDPGSGSTQAAGKLESISAMPVYKDKSHEELRWE 373

Query: 1546 DYQLGDKGGPSPAVQPAGGIGFSAPAAQSNPFGA--------XXXXXXXXTNPFASKPST 1391
            DYQLGDKGGP PA Q A G+GF  P  Q NP  +                TNPFA KPS 
Sbjct: 374  DYQLGDKGGPLPAGQSASGVGFGVPGGQPNPVASSTFSQSSPNPFSTSTPTNPFAPKPSG 433

Query: 1390 FXXXXXXXXXXXXXXXXXXXXXXXANPFGATSSSTQSLFXXXXXXXXXXXXXXXXXXXXX 1211
            F                       +NPF +T++++ S F                     
Sbjct: 434  F--GTFGPSTTFSFNSSAFAPSTPSNPFASTTAASTSAF-----LSSTTSQFGSSSLFSS 486

Query: 1210 XXXXXXXXXXXXXXATAPGTTAAFG---NYGYTQSAGLFQSTTPSLGQTNSA 1064
                           T+PGT   F    N+G TQS+ LFQSTTP++GQT SA
Sbjct: 487  SNTQPLASQSAFSSTTSPGTNLTFPSSLNFGNTQSSSLFQSTTPAIGQTGSA 538



 Score =  110 bits (276), Expect = 9e-22
 Identities = 65/123 (52%), Positives = 76/123 (61%), Gaps = 2/123 (1%)
 Frame = -2

Query: 976 PLFGASF-PALGAXXXXXXXXXXXXXXXXXXXXFGSSPYGASPSPFGTQSSSGGQAATST 800
           P FGAS  PA GA                    FGSS +G + SPFG QSS  G  +TS+
Sbjct: 252 PAFGASSAPAFGASSTPSFSFGSTPAFGQSTSGFGSSTFGTNTSPFGAQSSPFGAQSTSS 311

Query: 799 FGSTLFGESAFGGQQRGSSRVAAYSPTAEINGGS-SAQPTGKFESISVMPVYEDKSHEEL 623
           FG++ FG++ FGG QRG SRV  Y+PT E + GS S Q  GK ESIS MPVY+DKSHEEL
Sbjct: 312 FGTSGFGQAGFGG-QRGGSRVTPYAPTPEPDPGSGSTQAAGKLESISAMPVYKDKSHEEL 370

Query: 622 RWE 614
           RWE
Sbjct: 371 RWE 373


>dbj|BAF98996.1| nucleoporin 98 [Daucus carota]
          Length = 1005

 Score =  161 bits (407), Expect = 6e-37
 Identities = 107/232 (46%), Positives = 123/232 (53%), Gaps = 14/232 (6%)
 Frame = -2

Query: 1717 FGQSAFGGQQRGGSRVAAYSPTAEIDGGSSTQPTGKLESISAMPVYKDKSHEELRWEDYQ 1538
            FG S FGGQ RGGSRVAAY+PTAE D G+ TQP GKLESISAMPVYKDKSHEELRWEDYQ
Sbjct: 310  FGSSTFGGQ-RGGSRVAAYTPTAEADAGTGTQPAGKLESISAMPVYKDKSHEELRWEDYQ 368

Query: 1537 LGDKGGPSPAVQPAGGIGFSA-----PAAQSNPFG-----AXXXXXXXXTNPFASKPSTF 1388
            LGDKGGP+ A QPAG  GF       P + S+ FG     A        TNPF  K + F
Sbjct: 369  LGDKGGPNSAAQPAGAAGFGTNTQPNPFSSSSTFGQASAPANPFSSNNATNPFGQKSAPF 428

Query: 1387 XXXXXXXXXXXXXXXXXXXXXXXANPFGATSSSTQSLFXXXXXXXXXXXXXXXXXXXXXX 1208
                                   ANPFG+TSS+  SLF                      
Sbjct: 429  -STPGFAASTSAFGSSAFGSTTNANPFGSTSSAAPSLF--GSTTSTFGGTPASPFGSAAT 485

Query: 1207 XXXXXXXXXXXXXATAPGTTAA-FG---NYGYTQSAGLFQSTTPSLGQTNSA 1064
                          +A GTT++ F    N+G TQ + LFQS TPS+GQ++SA
Sbjct: 486  TSAFGTSTSIFGSTSAQGTTSSPFNSGLNFGNTQQSPLFQSNTPSIGQSSSA 537



 Score =  118 bits (295), Expect = 6e-24
 Identities = 79/194 (40%), Positives = 96/194 (49%), Gaps = 14/194 (7%)
 Frame = -2

Query: 1153 TTAAFGN-----YGYTQSAGLFQSTTPSLGQTNSAXXXXXXXXXXXXXXXXXXXXXXXXX 989
            +T AFG      +G T S      +TP+ G T +A                         
Sbjct: 173  STPAFGATNTPAFGATSSPAFGSVSTPTFGSTGNAFGVSNAPVFGSSSPAFGAASTPAFG 232

Query: 988  XXXSPLFG-ASFPALGAXXXXXXXXXXXXXXXXXXXXFG-------SSPYGASPSPFGTQ 833
               +P FG +S P+ GA                    FG       S+ +GASPSPFG  
Sbjct: 233  ATSAPAFGTSSSPSFGASTTPPFGASSPSFSFGSTPAFGQSTSAFGSTQFGASPSPFGAP 292

Query: 832  SSS-GGQAATSTFGSTLFGESAFGGQQRGSSRVAAYSPTAEINGGSSAQPTGKFESISVM 656
            SS+ G Q ++  FGS  FG S FGGQ RG SRVAAY+PTAE + G+  QP GK ESIS M
Sbjct: 293  SSTFGAQTSSPAFGSPGFGSSTFGGQ-RGGSRVAAYTPTAEADAGTGTQPAGKLESISAM 351

Query: 655  PVYEDKSHEELRWE 614
            PVY+DKSHEELRWE
Sbjct: 352  PVYKDKSHEELRWE 365