BLASTX nr result

ID: Cimicifuga21_contig00008695 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00008695
         (1387 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002275861.1| PREDICTED: geranylgeranyl transferase type-2...   562   e-158
ref|XP_002281543.1| PREDICTED: geranylgeranyl transferase type-2...   556   e-156
ref|XP_004135836.1| PREDICTED: geranylgeranyl transferase type-2...   549   e-154
ref|XP_002319501.1| predicted protein [Populus trichocarpa] gi|2...   547   e-153
ref|NP_001242036.1| uncharacterized protein LOC100793642 [Glycin...   542   e-152

>ref|XP_002275861.1| PREDICTED: geranylgeranyl transferase type-2 subunit beta [Vitis
            vinifera] gi|147860391|emb|CAN82570.1| hypothetical
            protein VITISV_016117 [Vitis vinifera]
            gi|296090220|emb|CBI40039.3| unnamed protein product
            [Vitis vinifera]
          Length = 317

 Score =  562 bits (1448), Expect = e-158
 Identities = 264/314 (84%), Positives = 292/314 (92%)
 Frame = +1

Query: 199  MDLNSGELEVEKHVQYILSVEKKKDSVESVMMEHLRLNGAYWGLTTLDLLGKLQTVDQQA 378
            M+   G+LEVEKHVQYILSVEK+KD+ ESV+MEHLR+NGAYWGLTTLDLLGKL  VD+  
Sbjct: 1    MEGQIGDLEVEKHVQYILSVEKRKDNFESVVMEHLRMNGAYWGLTTLDLLGKLDMVDEDE 60

Query: 379  VISWVMQCQDKESGGFGGNIGHDPHILYTLSAVQVLALFGKLDVLDVDMVSNYISGLQNE 558
            +ISWVM+CQ  ESGGFGGN+GHDPHILYTLSAVQVLALF KL+VLD+D VSNYI+GLQNE
Sbjct: 61   IISWVMECQH-ESGGFGGNVGHDPHILYTLSAVQVLALFDKLNVLDIDKVSNYIAGLQNE 119

Query: 559  DGSFSGDIWGEIDTRFSYVAICCLSLLRRLDKINIAKAVDYIVSCKNLDGGFGCTPGGES 738
            DGSFSGD+WGEIDTRFSY+AIC LSLL+RLDKIN+ KAV+YIVSCKNLDGGFGCTPG ES
Sbjct: 120  DGSFSGDMWGEIDTRFSYIAICSLSLLQRLDKINVEKAVNYIVSCKNLDGGFGCTPGAES 179

Query: 739  HAGQIFCCVGALALTGSLHYIDKDLLGWWLCERQHENGGLNGRPEKLPDVCYSWWVLSSL 918
            HAGQIFCCV ALALTGSLH++DKDLLGWWLCERQ ++G LNGRPEKLPDVCYSWWVLSSL
Sbjct: 180  HAGQIFCCVSALALTGSLHHVDKDLLGWWLCERQVKSGALNGRPEKLPDVCYSWWVLSSL 239

Query: 919  IMIDRVHWMDKGKLARFILDCQDKENGGISDRPDDAVDVFHTYFGVAGLSLLEYPGIKAI 1098
            IMIDR HW+DK KL +FILDCQDKENGGISDRPDDAVDVFHTYFGVAGL+ LEYPG+KA+
Sbjct: 240  IMIDRAHWIDKEKLIKFILDCQDKENGGISDRPDDAVDVFHTYFGVAGLAHLEYPGLKAV 299

Query: 1099 DPAYALPVDVVDRI 1140
            DPAYALPVDVV+RI
Sbjct: 300  DPAYALPVDVVNRI 313


>ref|XP_002281543.1| PREDICTED: geranylgeranyl transferase type-2 subunit beta [Vitis
            vinifera] gi|147821440|emb|CAN74579.1| hypothetical
            protein VITISV_024797 [Vitis vinifera]
            gi|296081232|emb|CBI17976.3| unnamed protein product
            [Vitis vinifera]
          Length = 317

 Score =  556 bits (1434), Expect = e-156
 Identities = 259/309 (83%), Positives = 288/309 (93%)
 Frame = +1

Query: 214  GELEVEKHVQYILSVEKKKDSVESVMMEHLRLNGAYWGLTTLDLLGKLQTVDQQAVISWV 393
            GELE EKHVQYIL VEK+KD  ESV+ EHLR+NGAYWGLTTLDLLGKL+ VDQ  V+SWV
Sbjct: 6    GELEAEKHVQYILLVEKRKDDFESVVTEHLRMNGAYWGLTTLDLLGKLEIVDQDEVVSWV 65

Query: 394  MQCQDKESGGFGGNIGHDPHILYTLSAVQVLALFGKLDVLDVDMVSNYISGLQNEDGSFS 573
            M+CQ  ESGGFGGNIGHDPHI++TLSAVQVLALF KL+VLD+D ++NYI+GLQN DGSFS
Sbjct: 66   MECQH-ESGGFGGNIGHDPHIVHTLSAVQVLALFDKLNVLDIDKITNYIAGLQNVDGSFS 124

Query: 574  GDIWGEIDTRFSYVAICCLSLLRRLDKINIAKAVDYIVSCKNLDGGFGCTPGGESHAGQI 753
            GD+WGEIDTRFSY+AICCLSLL+ LDKIN+ KAV+YIVSCKNLDGGFGCTPG ESHAGQI
Sbjct: 125  GDMWGEIDTRFSYIAICCLSLLQCLDKINVEKAVNYIVSCKNLDGGFGCTPGAESHAGQI 184

Query: 754  FCCVGALALTGSLHYIDKDLLGWWLCERQHENGGLNGRPEKLPDVCYSWWVLSSLIMIDR 933
            FCCVGALALTGSLH++DKDLLGWWLCERQ ++GGLNGRPEKLPDVCYSWWVLSSLIMIDR
Sbjct: 185  FCCVGALALTGSLHHVDKDLLGWWLCERQVKSGGLNGRPEKLPDVCYSWWVLSSLIMIDR 244

Query: 934  VHWMDKGKLARFILDCQDKENGGISDRPDDAVDVFHTYFGVAGLSLLEYPGIKAIDPAYA 1113
             HW+DK KL +FI+DCQD+ENGGISDRPDDAVDVFHTYFGVAGLSLLEYPG+KA+DPAYA
Sbjct: 245  AHWIDKDKLIKFIIDCQDRENGGISDRPDDAVDVFHTYFGVAGLSLLEYPGVKAVDPAYA 304

Query: 1114 LPVDVVDRI 1140
            LPV VV+RI
Sbjct: 305  LPVHVVNRI 313



 Score = 57.8 bits (138), Expect = 7e-06
 Identities = 36/168 (21%), Positives = 77/168 (45%)
 Frame = +1

Query: 496 GKLDVLDVDMVSNYISGLQNEDGSFSGDIWGEIDTRFSYVAICCLSLLRRLDKINIAKAV 675
           GK+  L+ +    YI  ++     F   +   +    +Y  +  L LL +L+ ++  + V
Sbjct: 3   GKIGELEAEKHVQYILLVEKRKDDFESVVTEHLRMNGAYWGLTTLDLLGKLEIVDQDEVV 62

Query: 676 DYIVSCKNLDGGFGCTPGGESHAGQIFCCVGALALTGSLHYIDKDLLGWWLCERQHENGG 855
            +++ C++  GGFG   G + H       V  LAL   L+ +D D +  ++   Q+ +G 
Sbjct: 63  SWVMECQHESGGFGGNIGHDPHIVHTLSAVQVLALFDKLNVLDIDKITNYIAGLQNVDGS 122

Query: 856 LNGRPEKLPDVCYSWWVLSSLIMIDRVHWMDKGKLARFILDCQDKENG 999
            +G      D  +S+  +  L ++  +  ++  K   +I+ C++ + G
Sbjct: 123 FSGDMWGEIDTRFSYIAICCLSLLQCLDKINVEKAVNYIVSCKNLDGG 170


>ref|XP_004135836.1| PREDICTED: geranylgeranyl transferase type-2 subunit beta-like
            [Cucumis sativus] gi|449490992|ref|XP_004158768.1|
            PREDICTED: geranylgeranyl transferase type-2 subunit
            beta-like [Cucumis sativus]
          Length = 317

 Score =  549 bits (1415), Expect = e-154
 Identities = 255/309 (82%), Positives = 283/309 (91%)
 Frame = +1

Query: 214  GELEVEKHVQYILSVEKKKDSVESVMMEHLRLNGAYWGLTTLDLLGKLQTVDQQAVISWV 393
            GEL  EKHVQYILSVEKKKD  +SV+MEHLR+NGAYWGLT LD+LGKL TVD   V+SWV
Sbjct: 2    GELATEKHVQYILSVEKKKDDFQSVVMEHLRMNGAYWGLTALDILGKLDTVDADEVVSWV 61

Query: 394  MQCQDKESGGFGGNIGHDPHILYTLSAVQVLALFGKLDVLDVDMVSNYISGLQNEDGSFS 573
            M CQ  ESGGF GN+GHDPHILYTLSAVQVLALF KLDVLDVD V+NY+ GLQNEDGSFS
Sbjct: 62   MSCQH-ESGGFSGNVGHDPHILYTLSAVQVLALFDKLDVLDVDKVTNYVVGLQNEDGSFS 120

Query: 574  GDIWGEIDTRFSYVAICCLSLLRRLDKINIAKAVDYIVSCKNLDGGFGCTPGGESHAGQI 753
            GDIWGE+D+RFSY+AI CLSLL +LDKIN+ KAV+++VSCKN+DGGFGCTPGGESH+GQI
Sbjct: 121  GDIWGEVDSRFSYIAILCLSLLHQLDKINVEKAVNFVVSCKNMDGGFGCTPGGESHSGQI 180

Query: 754  FCCVGALALTGSLHYIDKDLLGWWLCERQHENGGLNGRPEKLPDVCYSWWVLSSLIMIDR 933
            FCCVGALALTGSLH++DKDLLGWWLCERQ ++GGLNGRPEKLPDVCYSWWVLSSLIMIDR
Sbjct: 181  FCCVGALALTGSLHHVDKDLLGWWLCERQVKSGGLNGRPEKLPDVCYSWWVLSSLIMIDR 240

Query: 934  VHWMDKGKLARFILDCQDKENGGISDRPDDAVDVFHTYFGVAGLSLLEYPGIKAIDPAYA 1113
            VHW+ K KL +FILDCQD ENGGISDRPDDAVDV+HTYFG+AGLSLLEYP +K IDPAYA
Sbjct: 241  VHWISKEKLIKFILDCQDTENGGISDRPDDAVDVYHTYFGIAGLSLLEYPSLKPIDPAYA 300

Query: 1114 LPVDVVDRI 1140
            LPVDVV+RI
Sbjct: 301  LPVDVVNRI 309


>ref|XP_002319501.1| predicted protein [Populus trichocarpa] gi|222857877|gb|EEE95424.1|
            predicted protein [Populus trichocarpa]
          Length = 313

 Score =  547 bits (1409), Expect = e-153
 Identities = 254/309 (82%), Positives = 286/309 (92%)
 Frame = +1

Query: 214  GELEVEKHVQYILSVEKKKDSVESVMMEHLRLNGAYWGLTTLDLLGKLQTVDQQAVISWV 393
            GEL V+KHV+YILSVEK+KDS ESV++EHLR+NGAYWGL TLDLLGKL  +D   VI W+
Sbjct: 2    GELVVDKHVKYILSVEKRKDSFESVVLEHLRMNGAYWGLATLDLLGKLDALDSNEVIEWI 61

Query: 394  MQCQDKESGGFGGNIGHDPHILYTLSAVQVLALFGKLDVLDVDMVSNYISGLQNEDGSFS 573
            M+CQ  ESGGF GNIGHDPH+LYTLSAVQVLALF KL+VLD D V+NYISGLQNEDGSFS
Sbjct: 62   MKCQH-ESGGFAGNIGHDPHMLYTLSAVQVLALFDKLNVLDADKVANYISGLQNEDGSFS 120

Query: 574  GDIWGEIDTRFSYVAICCLSLLRRLDKINIAKAVDYIVSCKNLDGGFGCTPGGESHAGQI 753
            GD WGE+D+RFSY+AICCLS+L RLDKIN+ KAV+YI SCKN+DGGFGCTPGGESHAGQI
Sbjct: 121  GDEWGEVDSRFSYLAICCLSILHRLDKINVEKAVNYIASCKNVDGGFGCTPGGESHAGQI 180

Query: 754  FCCVGALALTGSLHYIDKDLLGWWLCERQHENGGLNGRPEKLPDVCYSWWVLSSLIMIDR 933
            FCCVGALA+TGSLH++DKDLLGWWLCERQ ++GGLNGRPEKLPDVCYSWWVLSSLIMIDR
Sbjct: 181  FCCVGALAITGSLHHVDKDLLGWWLCERQVKSGGLNGRPEKLPDVCYSWWVLSSLIMIDR 240

Query: 934  VHWMDKGKLARFILDCQDKENGGISDRPDDAVDVFHTYFGVAGLSLLEYPGIKAIDPAYA 1113
            VHW++K KL +FIL+CQD ENGGISDRPDDAVDV+HTYFGVAGLSLLEYPG+KAIDPA+A
Sbjct: 241  VHWINKDKLVKFILNCQDTENGGISDRPDDAVDVYHTYFGVAGLSLLEYPGLKAIDPAHA 300

Query: 1114 LPVDVVDRI 1140
            LPVDVV+RI
Sbjct: 301  LPVDVVNRI 309


>ref|NP_001242036.1| uncharacterized protein LOC100793642 [Glycine max]
            gi|255635594|gb|ACU18147.1| unknown [Glycine max]
          Length = 317

 Score =  542 bits (1397), Expect = e-152
 Identities = 252/309 (81%), Positives = 282/309 (91%)
 Frame = +1

Query: 214  GELEVEKHVQYILSVEKKKDSVESVMMEHLRLNGAYWGLTTLDLLGKLQTVDQQAVISWV 393
            GEL  EKHV+YILSVEK+KD+ ESV+MEHLR+NGAYWGLTTLDLLGKL +VD   V+SW+
Sbjct: 2    GELATEKHVRYILSVEKRKDNFESVVMEHLRMNGAYWGLTTLDLLGKLHSVDVDEVVSWL 61

Query: 394  MQCQDKESGGFGGNIGHDPHILYTLSAVQVLALFGKLDVLDVDMVSNYISGLQNEDGSFS 573
            M CQ  ESGGFGGN+GHDPHILYTLSAVQVLALF KL+V+DVD V++YI  LQNEDGSFS
Sbjct: 62   MSCQH-ESGGFGGNVGHDPHILYTLSAVQVLALFDKLNVIDVDKVTSYIVSLQNEDGSFS 120

Query: 574  GDIWGEIDTRFSYVAICCLSLLRRLDKINIAKAVDYIVSCKNLDGGFGCTPGGESHAGQI 753
            GD+WGE+DTRFSY+ ICCLS+L  LDKIN+ KAV YI+SCKN+DGGFGCTPGGESHAGQI
Sbjct: 121  GDMWGEVDTRFSYIVICCLSILHCLDKINVEKAVKYIISCKNMDGGFGCTPGGESHAGQI 180

Query: 754  FCCVGALALTGSLHYIDKDLLGWWLCERQHENGGLNGRPEKLPDVCYSWWVLSSLIMIDR 933
            FCCVGALA+TGSL  +DKDLLGWWLCERQ ++GGLNGRPEKLPDVCYSWWVLSSLIMIDR
Sbjct: 181  FCCVGALAITGSLDLVDKDLLGWWLCERQVKSGGLNGRPEKLPDVCYSWWVLSSLIMIDR 240

Query: 934  VHWMDKGKLARFILDCQDKENGGISDRPDDAVDVFHTYFGVAGLSLLEYPGIKAIDPAYA 1113
            VHW+ K KL +FILDCQD ENGGISDRPDDAVDVFHT+FGVAGLSLLEYPG+K +DPAYA
Sbjct: 241  VHWISKEKLIKFILDCQDTENGGISDRPDDAVDVFHTFFGVAGLSLLEYPGLKPVDPAYA 300

Query: 1114 LPVDVVDRI 1140
            LPVDVV+RI
Sbjct: 301  LPVDVVNRI 309


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