BLASTX nr result
ID: Cimicifuga21_contig00008685
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Cimicifuga21_contig00008685
(1851 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002278434.1| PREDICTED: pentatricopeptide repeat-containi... 627 e-177
ref|XP_002313976.1| predicted protein [Populus trichocarpa] gi|2... 596 e-168
ref|XP_002521193.1| conserved hypothetical protein [Ricinus comm... 593 e-167
ref|XP_003538312.1| PREDICTED: pentatricopeptide repeat-containi... 589 e-166
ref|XP_003551233.1| PREDICTED: pentatricopeptide repeat-containi... 582 e-163
>ref|XP_002278434.1| PREDICTED: pentatricopeptide repeat-containing protein At2g30100,
chloroplastic [Vitis vinifera]
Length = 511
Score = 627 bits (1617), Expect = e-177
Identities = 319/446 (71%), Positives = 368/446 (82%), Gaps = 6/446 (1%)
Frame = +2
Query: 263 EFRLFSSRIELDPFSTTANDNDEMGEGFFQAIEELERMVREPADVLEEMNSKLSPRELQL 442
EFRLF S +ELD F T++D DEM EGFF+AIEELERM REP+DVLEEMN +LS RELQL
Sbjct: 70 EFRLFKS-VELDQF-LTSDDEDEMSEGFFEAIEELERMTREPSDVLEEMNDRLSARELQL 127
Query: 443 VLLYFSQEGRDSWCALEVFEWLHKENRVDKETMDLMISIMCAWVSKLIQAKHTXXXXXXX 622
VL+YFSQEGRDSWCALEVFEWL KENRVDKETM+LM+SIMC+WV KLI+ +H
Sbjct: 128 VLVYFSQEGRDSWCALEVFEWLRKENRVDKETMELMVSIMCSWVKKLIEGEHDVGDVVDL 187
Query: 623 XXXXXXXXXXKPSFSMIEKVISLYWDMGNKENAVLFVKEVLRQEIAYTVDNRDNNKGGPI 802
KP FSMIEKVISLYW+M KE AVLFVKEVLR+EIAY+ D+ D +KGGP
Sbjct: 188 LVDMDCVGL-KPGFSMIEKVISLYWEMEEKEKAVLFVKEVLRREIAYSEDDGDGHKGGPT 246
Query: 803 GYLAWKMMVDGNYTGAVKLVIDFRECGLNPEGYSYLIAMTAVVKELNEFSKVLRKLKGFI 982
GYLAWKMM +GNY GAVKLVI RE GL PE YSYLIAMTAVVKELNEF+K LRKLKGF
Sbjct: 247 GYLAWKMMAEGNYRGAVKLVIHLRESGLKPEVYSYLIAMTAVVKELNEFAKALRKLKGFT 306
Query: 983 KGGLIAEVDVENVAGIEKYQSDLVSDGVRLSNWAMEEGSSLHSAVIHERLLAMYICAGRG 1162
K GLIAE+D ENV IEKYQSDL++DGVRLS+W ++EG S V++ERLLAMYICAGRG
Sbjct: 307 KSGLIAELDAENVELIEKYQSDLLADGVRLSSWVIQEGRSPLHGVVYERLLAMYICAGRG 366
Query: 1163 LEAEQQLWEMKLIGKEADRELYDIVLAICAYQKETSAVTRLLT------CGRGKKTLVWL 1324
LEAE+QLWEMKL+GKEADRELYDIVLAICA +KE SA++RLLT R KKTL WL
Sbjct: 367 LEAERQLWEMKLVGKEADRELYDIVLAICASKKEASAISRLLTGMEVTSSIRRKKTLSWL 426
Query: 1325 LRGYVKGGHFEDASKTIMKMLDMGLFPEYLDRAAVVQGLRKGIRESAGNMEPYLKLCKHL 1504
LRGY+KG HF+DAS+TI+KMLD+GL PEYLDRAAV+QGLR I+++ GN+E YLKLCKHL
Sbjct: 427 LRGYIKGSHFDDASETIIKMLDLGLCPEYLDRAAVLQGLRNRIQQT-GNVETYLKLCKHL 485
Query: 1505 SDANLIGPCLVYMYMDRYRLWVIKMV 1582
SDANLIGPCLVY+Y+ +Y+LW++K +
Sbjct: 486 SDANLIGPCLVYLYIKKYKLWILKTI 511
>ref|XP_002313976.1| predicted protein [Populus trichocarpa] gi|222850384|gb|EEE87931.1|
predicted protein [Populus trichocarpa]
Length = 500
Score = 596 bits (1537), Expect = e-168
Identities = 306/461 (66%), Positives = 364/461 (78%), Gaps = 6/461 (1%)
Frame = +2
Query: 218 FPKATTTTSRRRFGDEFRLFSSRIELDPFSTTANDNDEMGEGFFQAIEELERMVREPADV 397
F A TT R EFRLF S +ELD + T++D +EMGEGFF+AIEELERM REP+D+
Sbjct: 49 FVVAKTTKVR-----EFRLFKS-VELDQY-VTSDDEEEMGEGFFEAIEELERMTREPSDI 101
Query: 398 LEEMNSKLSPRELQLVLLYFSQEGRDSWCALEVFEWLHKENRVDKETMDLMISIMCAWVS 577
LEEMN +LS RELQLVL+YFSQEGRDSWCALEVFEWL KENRVDKETM+LM+SIMC+WV
Sbjct: 102 LEEMNDRLSARELQLVLVYFSQEGRDSWCALEVFEWLRKENRVDKETMELMVSIMCSWVK 161
Query: 578 KLIQAKHTXXXXXXXXXXXXXXXXXKPSFSMIEKVISLYWDMGNKENAVLFVKEVLRQEI 757
KLI+ + KPSFSMIEKVISLYWDMG KE AV FVKEVLR+ I
Sbjct: 162 KLIEGEQDVGDVVDLLVDMDCVGL-KPSFSMIEKVISLYWDMGKKEGAVSFVKEVLRRGI 220
Query: 758 AYTVDNRDNNKGGPIGYLAWKMMVDGNYTGAVKLVIDFRECGLNPEGYSYLIAMTAVVKE 937
AY+ D+ + KGGP GYL WKMMVDGNY AVKLVI RE GL PE Y+YLIAMTAVVKE
Sbjct: 221 AYSGDDGEGQKGGPTGYLTWKMMVDGNYRNAVKLVIHLRESGLKPEIYAYLIAMTAVVKE 280
Query: 938 LNEFSKVLRKLKGFIKGGLIAEVDVENVAGIEKYQSDLVSDGVRLSNWAMEEGSSLHSAV 1117
LNEFSK LRKLKG+ + G++ E+D ENV +EKYQSDL++DGV LS+W ++EGS V
Sbjct: 281 LNEFSKALRKLKGYSRSGMVTELDAENVELVEKYQSDLLADGVCLSSWVIQEGSPALYGV 340
Query: 1118 IHERLLAMYICAGRGLEAEQQLWEMKLIGKEADRELYDIVLAICAYQKETSAVTRLLT-- 1291
+HERLLAMYICAGRGL+AE+QLWEMKL+GKEAD +LYDIVLAICA QKE SAV RLLT
Sbjct: 341 VHERLLAMYICAGRGLDAERQLWEMKLVGKEADGDLYDIVLAICASQKEASAVARLLTRI 400
Query: 1292 ----CGRGKKTLVWLLRGYVKGGHFEDASKTIMKMLDMGLFPEYLDRAAVVQGLRKGIRE 1459
R KK+L WLLRGY+KGGH+ +A++T++KMLD+GL P+YLDR AV+QGLRK I++
Sbjct: 401 EVASSMRKKKSLSWLLRGYIKGGHYGEAAETLIKMLDLGLSPDYLDRVAVMQGLRKRIQQ 460
Query: 1460 SAGNMEPYLKLCKHLSDANLIGPCLVYMYMDRYRLWVIKMV 1582
GN+E YLKLCK LSD NLIGP LVY+Y+ +Y+LW++K++
Sbjct: 461 -WGNVESYLKLCKRLSDVNLIGPSLVYLYIKKYKLWIMKLL 500
>ref|XP_002521193.1| conserved hypothetical protein [Ricinus communis]
gi|223539607|gb|EEF41193.1| conserved hypothetical
protein [Ricinus communis]
Length = 499
Score = 593 bits (1529), Expect = e-167
Identities = 306/461 (66%), Positives = 363/461 (78%), Gaps = 6/461 (1%)
Frame = +2
Query: 218 FPKATTTTSRRRFGDEFRLFSSRIELDPFSTTANDNDEMGEGFFQAIEELERMVREPADV 397
F A + SR R EFR+ S +ELD + ++D +EM EGFF+AIEELERM REP+DV
Sbjct: 46 FVVAQQSKSRNR---EFRVLKS-VELDQY-IASDDEEEMSEGFFEAIEELERMTREPSDV 100
Query: 398 LEEMNSKLSPRELQLVLLYFSQEGRDSWCALEVFEWLHKENRVDKETMDLMISIMCAWVS 577
LEEMN KLS RELQLVL+YFSQEGRDSWCALEVFEWL KENRVDKETM+LM+SIMC+W+
Sbjct: 101 LEEMNDKLSARELQLVLVYFSQEGRDSWCALEVFEWLRKENRVDKETMELMVSIMCSWIK 160
Query: 578 KLIQAKHTXXXXXXXXXXXXXXXXXKPSFSMIEKVISLYWDMGNKENAVLFVKEVLRQEI 757
KLI+ +H KPSFSMIEKVISLYW++G KE +V FVKEVLR+E+
Sbjct: 161 KLIEGEHEIGDVVDLLVDMDCVGL-KPSFSMIEKVISLYWEIGEKEKSVSFVKEVLRREV 219
Query: 758 AYTVDNRDNNKGGPIGYLAWKMMVDGNYTGAVKLVIDFRECGLNPEGYSYLIAMTAVVKE 937
AY D+ + KGGP GYLAWKMMVDGNY AVKLVI FRE GL PE YSYLIAMTAVVKE
Sbjct: 220 AYFEDDGEGQKGGPTGYLAWKMMVDGNYRDAVKLVIHFRESGLKPEVYSYLIAMTAVVKE 279
Query: 938 LNEFSKVLRKLKGFIKGGLIAEVDVENVAGIEKYQSDLVSDGVRLSNWAMEEGSSLHSAV 1117
LNEF+K LRKLKGF K GLIAE+D EN IEKYQSDL++DGV LS+W ++EGS V
Sbjct: 280 LNEFAKALRKLKGFAKSGLIAELDAENTRLIEKYQSDLIADGVCLSSWVIQEGSPSLYGV 339
Query: 1118 IHERLLAMYICAGRGLEAEQQLWEMKLIGKEADRELYDIVLAICAYQKETSAVTRLLT-- 1291
+HERLLAMYICAGRGL+AE+QLWEMKL+GK AD +LYDIVLAICA QKE SAV+RLLT
Sbjct: 340 VHERLLAMYICAGRGLDAERQLWEMKLVGKHADGDLYDIVLAICASQKEASAVSRLLTRV 399
Query: 1292 ----CGRGKKTLVWLLRGYVKGGHFEDASKTIMKMLDMGLFPEYLDRAAVVQGLRKGIRE 1459
+ KKTL WLLRGY+KGG +++A++ ++KMLDMGL P+YLDR AV+QGLRK I++
Sbjct: 400 EVTSSLQKKKTLSWLLRGYLKGGQYDEAAEALVKMLDMGLCPDYLDRVAVLQGLRKRIQQ 459
Query: 1460 SAGNMEPYLKLCKHLSDANLIGPCLVYMYMDRYRLWVIKMV 1582
GN+E YL LCK LSD NLIGP LVY+Y+ +Y+LW++KM+
Sbjct: 460 -WGNVESYLNLCKRLSDENLIGPSLVYLYIKKYKLWIMKML 499
>ref|XP_003538312.1| PREDICTED: pentatricopeptide repeat-containing protein At2g30100,
chloroplastic-like [Glycine max]
Length = 510
Score = 589 bits (1519), Expect = e-166
Identities = 290/445 (65%), Positives = 356/445 (80%), Gaps = 6/445 (1%)
Frame = +2
Query: 266 FRLFSSRIELDPFSTTANDNDEMGEGFFQAIEELERMVREPADVLEEMNSKLSPRELQLV 445
FR S +ELD + T+ ++ DEM +GFF+AIEELERM REP+DVLEEMN +LS RELQLV
Sbjct: 68 FRALKS-VELDQYVTSDDEEDEMSDGFFEAIEELERMTREPSDVLEEMNDRLSARELQLV 126
Query: 446 LLYFSQEGRDSWCALEVFEWLHKENRVDKETMDLMISIMCAWVSKLIQAKHTXXXXXXXX 625
L+YFSQ+GRDSWCALEVF+WL KENRVDKETM+LM++IMC WV KLIQ H
Sbjct: 127 LVYFSQDGRDSWCALEVFDWLRKENRVDKETMELMVAIMCGWVKKLIQEHHGVVGDVVDL 186
Query: 626 XXXXXXXXXKPSFSMIEKVISLYWDMGNKENAVLFVKEVLRQEIAYTVDNRDNNKGGPIG 805
+P FSMIEKVISLYW+MG KE AVLFV+EVLR+ I Y ++ + +KGGP G
Sbjct: 187 LVDMDCVGLRPGFSMIEKVISLYWEMGEKEGAVLFVEEVLRRGIPYLEEDEEGHKGGPTG 246
Query: 806 YLAWKMMVDGNYTGAVKLVIDFRECGLNPEGYSYLIAMTAVVKELNEFSKVLRKLKGFIK 985
YLAWKMM +G+YT AV+LVI F E GL PE YSYL+AMTAVVKELNE +K LRKLK F +
Sbjct: 247 YLAWKMMAEGDYTSAVRLVIHFTESGLKPEVYSYLVAMTAVVKELNELAKALRKLKSFAR 306
Query: 986 GGLIAEVDVENVAGIEKYQSDLVSDGVRLSNWAMEEGSSLHSAVIHERLLAMYICAGRGL 1165
GL+AE+D+E+V EKYQSDL+ DGVRLSNWA+++GS +IHERLLAMYICAG G+
Sbjct: 307 TGLVAELDLEDVELTEKYQSDLLGDGVRLSNWAIQDGSPSLHGIIHERLLAMYICAGHGI 366
Query: 1166 EAEQQLWEMKLIGKEADRELYDIVLAICAYQKETSAVTRLLT------CGRGKKTLVWLL 1327
EAE+QLWEMKL+GKEAD +LYDIVLAICA QKE++A RLLT + KK+L WLL
Sbjct: 367 EAEKQLWEMKLVGKEADGDLYDIVLAICASQKESNATARLLTRLEVASSPQKKKSLSWLL 426
Query: 1328 RGYVKGGHFEDASKTIMKMLDMGLFPEYLDRAAVVQGLRKGIRESAGNMEPYLKLCKHLS 1507
RGY+KGGHF +A++TIMKMLD+G +PEYLDRAAV+QGLRK I++ GN++ Y++LCK LS
Sbjct: 427 RGYIKGGHFNEAAETIMKMLDLGFYPEYLDRAAVLQGLRKRIQQ-YGNLDTYVRLCKSLS 485
Query: 1508 DANLIGPCLVYMYMDRYRLWVIKMV 1582
DANLIGPCLV++Y+ +Y+LWV+KM+
Sbjct: 486 DANLIGPCLVHLYIRKYKLWVVKML 510
>ref|XP_003551233.1| PREDICTED: pentatricopeptide repeat-containing protein At2g30100,
chloroplastic-like [Glycine max]
Length = 508
Score = 582 bits (1500), Expect = e-163
Identities = 288/445 (64%), Positives = 357/445 (80%), Gaps = 6/445 (1%)
Frame = +2
Query: 266 FRLFSSRIELDPFSTTANDNDEMGEGFFQAIEELERMVREPADVLEEMNSKLSPRELQLV 445
FR S +E+D + T+ NDEM +GFF+AIEELERM REP+DVLEEMN +LS RELQLV
Sbjct: 70 FRALKS-VEMDQYVTS---NDEMSDGFFEAIEELERMTREPSDVLEEMNDRLSARELQLV 125
Query: 446 LLYFSQEGRDSWCALEVFEWLHKENRVDKETMDLMISIMCAWVSKLIQAKHTXXXXXXXX 625
L+YFSQ+GRDSWCALEVF+WL KENRVDKETM+LM++IMC WV KLIQ +H
Sbjct: 126 LVYFSQDGRDSWCALEVFDWLRKENRVDKETMELMVAIMCGWVKKLIQQQH-GVGDVVDL 184
Query: 626 XXXXXXXXXKPSFSMIEKVISLYWDMGNKENAVLFVKEVLRQEIAYTVDNRDNNKGGPIG 805
+P FSMIEKVISLYW+MG KE AVLFV+EVLR+ I Y ++ + +KGGP G
Sbjct: 185 LVDMDCVGLRPGFSMIEKVISLYWEMGEKEGAVLFVEEVLRRGIPYVEEDEEGHKGGPTG 244
Query: 806 YLAWKMMVDGNYTGAVKLVIDFRECGLNPEGYSYLIAMTAVVKELNEFSKVLRKLKGFIK 985
YLAWKMM +G+Y AV+LVI FRE GL PE YSYL+AMTAVVKELNEF+K LRKLKGF +
Sbjct: 245 YLAWKMMAEGDYRNAVRLVIRFRESGLKPEIYSYLVAMTAVVKELNEFAKALRKLKGFTR 304
Query: 986 GGLIAEVDVENVAGIEKYQSDLVSDGVRLSNWAMEEGSSLHSAVIHERLLAMYICAGRGL 1165
GL+AE+D+E+V EKYQSD ++DGVRLSNW +++GS ++HERLLAMYICAG G+
Sbjct: 305 AGLVAELDLEDVELTEKYQSDTLADGVRLSNWVIQDGSPSLHGIVHERLLAMYICAGHGI 364
Query: 1166 EAEQQLWEMKLIGKEADRELYDIVLAICAYQKETSAVTRLLT------CGRGKKTLVWLL 1327
EAE+QLWEMKL+GKEAD +LYDIVLAICA QKE++A RLLT + KK+L WLL
Sbjct: 365 EAERQLWEMKLVGKEADGDLYDIVLAICASQKESNATARLLTRLEVVSSPQKKKSLSWLL 424
Query: 1328 RGYVKGGHFEDASKTIMKMLDMGLFPEYLDRAAVVQGLRKGIRESAGNMEPYLKLCKHLS 1507
RGY+KGGHF +A++TIMKML++G +PEYLDRAAV+QGLRK I++ GN++ Y++LCK LS
Sbjct: 425 RGYIKGGHFNEAAETIMKMLELGFYPEYLDRAAVLQGLRKRIQQ-YGNLDTYVRLCKSLS 483
Query: 1508 DANLIGPCLVYMYMDRYRLWVIKMV 1582
DANLIGPCLV++Y+ +Y+LWV+KM+
Sbjct: 484 DANLIGPCLVHLYIRKYKLWVVKML 508