BLASTX nr result

ID: Cimicifuga21_contig00008668 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00008668
         (1546 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN67718.1| hypothetical protein VITISV_002357 [Vitis vinifera]   175   3e-41
emb|CAN62228.1| hypothetical protein VITISV_008028 [Vitis vinifera]   171   4e-40
ref|XP_002310570.1| predicted protein [Populus trichocarpa] gi|2...   164   8e-38
ref|XP_002307093.1| predicted protein [Populus trichocarpa] gi|2...   157   9e-36
ref|XP_002534310.1| conserved hypothetical protein [Ricinus comm...   156   1e-35

>emb|CAN67718.1| hypothetical protein VITISV_002357 [Vitis vinifera]
          Length = 449

 Score =  175 bits (444), Expect = 3e-41
 Identities = 140/367 (38%), Positives = 173/367 (47%), Gaps = 41/367 (11%)
 Frame = -2

Query: 1098 DEEFDSRGESFSAFFNSSRTSNQAFAEMSSIQQQEAPPPTRITSHHQNHPSSFLDPLS-- 925
            DEE++SR ES  AF N S           S+     PPP     HHQNHP +  DP S  
Sbjct: 16   DEEYESRPESIPAFLNPS-------GHFGSVSSNPQPPPF---PHHQNHPPTLFDPRSNY 65

Query: 924  --IFTLPTSPPTANSLLNLDMVLSRGFNSAPSCS---HNSGLMASSPSSGHQVLPRHPTT 760
               F+  ++ P ANSLLNLD V SRG  S P+C+   + +GL +SS SS  Q        
Sbjct: 66   VDAFSQSSANPNANSLLNLDTVWSRGLRSEPNCTDFGNLTGLSSSSTSSSGQ-------- 117

Query: 759  FPNPFSMPSSSG--HENNPRATPPSHPSNVG--VRNPKKRSRASRRAPTTVLTTDTSNFR 592
                 SM    G  HEN  RA+  S PS+    VR+ KKR+RASRRAPTTVLTTDTSNFR
Sbjct: 118  -----SMLGVQGPVHENGGRASSASLPSDQTNVVRSSKKRTRASRRAPTTVLTTDTSNFR 172

Query: 591  AMVQEFTGIPPPPFSTSPFLGNRLNLFXXXXSMRSA----------LRPVAHKVLPPSFI 442
            AMVQEFTGIP PPFS SP+   RL+LF    S++            LRP  HKV P  F+
Sbjct: 173  AMVQEFTGIPAPPFSASPY-SRRLDLFGAGSSIKPGHLEPLGPLYPLRPSPHKVQPNLFV 231

Query: 441  TSS---------------IVAPFXXXXXXXXXXXXXXXXXXXXXXXXXXXXYQLPSELSL 307
            +SS               IV+                              YQLPS+   
Sbjct: 232  SSSSSPSPSFFNSTIGDSIVSTTNIATTSTNNIITTSMAAATNAINSGSNTYQLPSDPGF 291

Query: 306  SRQSENPMNMMYPMLTF----XXXXXXXXXXXXPNVPIFGAKSQTSSTTN-SVLEEFNTV 142
             +Q +N + M  P+L+F                 +VP+FG KS  S T      EE    
Sbjct: 292  PKQPQNVLGMQNPILSFQSLLQSPPSHPLKYPLADVPVFGTKSPASLTLPLPSFEELGVP 351

Query: 141  RGLLNAD 121
             G +NA+
Sbjct: 352  HGHVNAN 358


>emb|CAN62228.1| hypothetical protein VITISV_008028 [Vitis vinifera]
          Length = 422

 Score =  171 bits (434), Expect = 4e-40
 Identities = 133/327 (40%), Positives = 161/327 (49%), Gaps = 36/327 (11%)
 Frame = -2

Query: 999 QEAPPPTRITSHHQNHPSSFLDPLSIF-----TLPTSPPTANSLLNLDMVLSRGFNSAPS 835
           Q  PPP     HH  H SS  DPLS +       PT     NSLLNLDMV S+   S P+
Sbjct: 6   QPPPPPPHHHHHHHTHSSSMFDPLSNYFDPLSRSPTQLQNPNSLLNLDMVWSKTLRSDPN 65

Query: 834 CSHNSGLMASS----PSSGHQVLPRHPTTFPNPF-SMPSSSGHENNPRATPPSHPSNVGV 670
           C+   G++ASS    P SG Q   R   TFP+   SMP     EN  RAT  +      V
Sbjct: 66  CTEIGGILASSSSTPPFSGAQGQIR--ATFPSSLPSMPFPPAPENAARATASASNDQTNV 123

Query: 669 -RNPKKRSRASRRAPTTVLTTDTSNFRAMVQEFTGIPPPPFSTSPFLGNRLNLFXXXXSM 493
            RNPKKRSRASRRAPTTVLTTDT+NFRAMVQEFTGIP  PF++SPF  +RL+LF    +M
Sbjct: 124 ARNPKKRSRASRRAPTTVLTTDTTNFRAMVQEFTGIPAQPFTSSPFPRSRLDLFGTASTM 183

Query: 492 RSA----------LRPVAHKVLPPSFI-----TSSIVAPFXXXXXXXXXXXXXXXXXXXX 358
           RS           LRP A K+ PP F      +SS  +                      
Sbjct: 184 RSGHLDHAPPSYLLRPFAQKLQPPPFASPPPSSSSSFSSSSMVDAIASTTNITSGSASNT 243

Query: 357 XXXXXXXXYQLPSELSLSRQSEN--PMNMMYPMLTFXXXXXXXXXXXXPNVPIFGAKSQT 184
                   YQLPS+L L +Q +N   MN+  P+L+             PN  I G+K Q 
Sbjct: 244 SSNSTSINYQLPSDLGLVKQPQNLLNMNVQNPILSIQSFLQTPLKYPHPNSAIMGSKPQG 303

Query: 183 S----STTNSV----LEEFNTVRGLLN 127
           S    ST + +    LE+F    G +N
Sbjct: 304 SLEIPSTDSHIKMGGLEDFGLSHGHVN 330


>ref|XP_002310570.1| predicted protein [Populus trichocarpa] gi|222853473|gb|EEE91020.1|
            predicted protein [Populus trichocarpa]
          Length = 527

 Score =  164 bits (414), Expect = 8e-38
 Identities = 128/331 (38%), Positives = 157/331 (47%), Gaps = 50/331 (15%)
 Frame = -2

Query: 1098 DEEFDSRGESFSAFFNSSRTSNQAFAEMSSIQQQEAPPPTRITSHHQNHPSS-------- 943
            DEE+DSR ES SAF N++         MSS      PP      HHQ H SS        
Sbjct: 16   DEEYDSRAESISAFLNNNNNPLSHVGPMSS----NPPPQPEHHHHHQTHHSSSSSTMLFD 71

Query: 942  ----FLDPLSIFTLPTSPP---TANSLLNLDMVLSRGFNSAPSCSHNSGLMASSPSSGHQ 784
                + DPLS  +  + PP     NSLLNLDMV S+   S P+C+   G ++SS  S  Q
Sbjct: 72   PLSNYFDPLSSASSRSPPPPFTNPNSLLNLDMVWSKNLRSEPNCTDLGGFISSS--SPTQ 129

Query: 783  VLPRHPTTFPNPFSMPSSSGHENNPRA----TPPSHPSNVGVRNPKKRSRASRRAPTTVL 616
             L  + T     F      GHE+  R     T     +  GVRNPKKRSRASRRAPTTVL
Sbjct: 130  QLFTNQTQTRTTFQSLPPHGHESATRGPVSGTNDQVSNTAGVRNPKKRSRASRRAPTTVL 189

Query: 615  TTDTSNFRAMVQEFTGIPPPPFSTSPFLGNRLNLF-XXXXSMRSA-------------LR 478
            TTDT+NFRAMVQEFTGIP PPF++SPF  +RL+LF     ++RSA             LR
Sbjct: 190  TTDTTNFRAMVQEFTGIPAPPFTSSPFPRSRLDLFGTAASTLRSAVSHHLDPSPPPYLLR 249

Query: 477  PVAHKVLPP---------------SFITSSIVAPFXXXXXXXXXXXXXXXXXXXXXXXXX 343
            P A +  PP               SF TS + A                           
Sbjct: 250  PFAQRFQPPPPPAPPFASSGSTASSFSTSMVDAIASTTTTNINNSGACTNSTTTSNISST 309

Query: 342  XXXYQLPSELSLSRQSEN--PMNMMYPMLTF 256
               YQLPS+L L +Q  +   +N+  P+L F
Sbjct: 310  SINYQLPSDLGLLKQPHHLLNINVQNPILNF 340


>ref|XP_002307093.1| predicted protein [Populus trichocarpa] gi|222856542|gb|EEE94089.1|
            predicted protein [Populus trichocarpa]
          Length = 510

 Score =  157 bits (396), Expect = 9e-36
 Identities = 106/244 (43%), Positives = 137/244 (56%), Gaps = 27/244 (11%)
 Frame = -2

Query: 1098 DEEFDS-RGESFSAFFNSSRTSNQAFAEMSSIQQQEAPPPTRITSHHQNHPSS-----FL 937
            DEE+DS R ES SAF NS+   N  F+ +  +   + P P     HHQ+H SS     F 
Sbjct: 16   DEEYDSSRAESISAFLNSNNNKNNPFSHVGPMPHNQPPEPDH--HHHQSHHSSSSSTMFF 73

Query: 936  DPLSIFTLPTSPPTA------------NSLLNLDMVLSRGFNSAPSCSHNSGLMASS-PS 796
            DP S +  P +P ++            NSL NLDMV S+   S P+C+   G ++SS P+
Sbjct: 74   DPFSNYFDPLAPSSSSSRSPLQSLTNPNSLNNLDMVWSKNLRSDPNCTDLGGFISSSLPT 133

Query: 795  SGHQVLPRHPTTFPNPFSMPSSSGHENNPRA--------TPPSHPSNVGVRNPKKRSRAS 640
                   ++ TTF    S+PS  G E+  R         T     +  G+RNPKKRSRAS
Sbjct: 134  QQFTNQTQNRTTFQ---SLPSH-GQESATRVPGSGSVSGTNDQVSNTAGIRNPKKRSRAS 189

Query: 639  RRAPTTVLTTDTSNFRAMVQEFTGIPPPPFSTSPFLGNRLNLFXXXXSMRSALRPVAHKV 460
            RRAPTTVL+TDT+NFRAMVQEFTGIP PPF++SPF  +RL+LF    +  S LR    + 
Sbjct: 190  RRAPTTVLSTDTTNFRAMVQEFTGIPAPPFTSSPFPRSRLDLF---GTAASTLRSAVSQH 246

Query: 459  LPPS 448
            L PS
Sbjct: 247  LDPS 250


>ref|XP_002534310.1| conserved hypothetical protein [Ricinus communis]
            gi|223525518|gb|EEF28072.1| conserved hypothetical
            protein [Ricinus communis]
          Length = 498

 Score =  156 bits (395), Expect = 1e-35
 Identities = 114/265 (43%), Positives = 139/265 (52%), Gaps = 43/265 (16%)
 Frame = -2

Query: 1098 DEEFDSRGES-FSAFFNSSRTSNQAFAEMSSIQQQEAPPPTRITSHHQNHPSSFLDPLSI 922
            D+E+DSR ES  SAF N S  +N     +  +     PPP      HQ H S F DPLS 
Sbjct: 15   DDEYDSRAESSISAFLNHSNNNNP-LTHVGPMPNPPPPPPDHHHHQHQTHHSMF-DPLSN 72

Query: 921  FTLPTS-----PPTA--NSLLNLDMVLSRGFNSAPSCSHNSGLMASSPSSGHQVLPRH-- 769
            +  P S     PP    NSLLNLDMV S+   S  +C+   G +A+S S   Q       
Sbjct: 73   YFDPLSSSRPPPPLTHPNSLLNLDMVWSKNLRSDTNCTDLGGFIATSSSPTQQFFTNQTQ 132

Query: 768  -------------------PTTFPNPFSMPSSSGHENNPRATPPSHPSNVGVRNPKKRSR 646
                               P+  P   S   S+GH+ N   T     +N+ VRNPKKRSR
Sbjct: 133  TGPTYNPSIQIPPVQETTAPSRGPGSASASGSNGHQTNNTTT-----TNI-VRNPKKRSR 186

Query: 645  ASRRAPTTVLTTDTSNFRAMVQEFTGIPPPPFSTSPFLGNRLNLF--XXXXSMRSA---- 484
            ASRRAPTTVLTTDT+NFRAMVQEFTGIP PPF++SPF  +RL+LF      S+RS     
Sbjct: 187  ASRRAPTTVLTTDTTNFRAMVQEFTGIPAPPFTSSPFPRSRLDLFGTAAASSLRSVVSHL 246

Query: 483  --------LRPVAHKVLPPSFITSS 433
                    LRP A K+ PP F++SS
Sbjct: 247  EPSHPSYLLRPFAQKIQPP-FLSSS 270


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