BLASTX nr result

ID: Cimicifuga21_contig00008667 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00008667
         (1240 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003516776.1| PREDICTED: uncharacterized protein LOC100780...   419   e-114
emb|CBI21631.3| unnamed protein product [Vitis vinifera]              411   e-112
ref|XP_002273254.1| PREDICTED: uncharacterized protein LOC100255...   411   e-112
ref|XP_002515845.1| gamma-tubulin complex component, putative [R...   379   e-103
ref|XP_003636002.1| Gamma-tubulin complex component [Medicago tr...   358   1e-96

>ref|XP_003516776.1| PREDICTED: uncharacterized protein LOC100780017 [Glycine max]
          Length = 1179

 Score =  419 bits (1076), Expect = e-114
 Identities = 195/290 (67%), Positives = 242/290 (83%)
 Frame = +1

Query: 1    KWSVAEASEKISEIQGFLDLAVQRSSCEGDPYKERLYLYMKGPGMVPLATPANGVHAFDF 180
            KWSV EA+E++SEIQG L+L++Q+SSCE D +K+RL++YMKG G +PL+  A GV +FDF
Sbjct: 881  KWSVTEANERLSEIQGLLELSIQKSSCEQDTHKDRLFVYMKGHGKLPLSASAIGVRSFDF 940

Query: 181  IALGYRVDWPVSIVLTPSALKIYADIFSFLIQVKLAAFSLTDVWCTMKDLVHLISQNCNS 360
            + LGY V WP+SIVLTP+ALK+YADIFSFLIQVKLA FSLTDVWC++KDLVH  ++N NS
Sbjct: 941  LGLGYHVQWPLSIVLTPAALKVYADIFSFLIQVKLAIFSLTDVWCSLKDLVHTTNKNQNS 1000

Query: 361  ELDERDKTYLKFLMRMRHQVSHFVSTLQQYVQSELSHVSWSRFLHSLKHQVRDMFDLESV 540
            E+ + +  +L  LM+MRHQ++HFVSTLQQYV+S+LSHVSW RFLHSL+H+V+DM DLESV
Sbjct: 1001 EIHQLETGHLNMLMKMRHQINHFVSTLQQYVESQLSHVSWCRFLHSLQHKVKDMMDLESV 1060

Query: 541  HMAYLADSLHTCFLSDETQAIAGIIESILQCALDFRSCFTVGCWEIGSDCRDSSKFLGRL 720
            HM YLADSL  CFLSDET+A+  IIESILQCALDFRSC TVG W+ GSD  D    L ++
Sbjct: 1061 HMEYLADSLCICFLSDETKAVGSIIESILQCALDFRSCITVGSWDSGSDPEDLLGKLSKI 1120

Query: 721  NISQVLTIKATFDKNLKELYLCYLKSPKHGEFSLCRFWGHLNYNDYYSTV 870
            NISQVL+IK  FD++LKEL++CY+K PKHG F L RFW +LNYN+YYS V
Sbjct: 1121 NISQVLSIKQKFDRSLKELHICYIKGPKHGNFGLSRFWDYLNYNEYYSNV 1170


>emb|CBI21631.3| unnamed protein product [Vitis vinifera]
          Length = 1043

 Score =  411 bits (1056), Expect = e-112
 Identities = 194/288 (67%), Positives = 235/288 (81%)
 Frame = +1

Query: 1    KWSVAEASEKISEIQGFLDLAVQRSSCEGDPYKERLYLYMKGPGMVPLATPANGVHAFDF 180
            +W+V EA +++SEIQG L+L++QRSSCE D  K++L++YMKG  M PL+T + GVH+F F
Sbjct: 747  RWNVTEADQRLSEIQGLLELSLQRSSCERDLKKDKLFVYMKGHAMAPLSTFSTGVHSFSF 806

Query: 181  IALGYRVDWPVSIVLTPSALKIYADIFSFLIQVKLAAFSLTDVWCTMKDLVHLISQNCNS 360
            + LGYRVDWP+SI+LTP ALKIYADIFSFLIQVKLAAFSLTDVWC++KDL+HL+SQN +S
Sbjct: 807  LGLGYRVDWPISIILTPGALKIYADIFSFLIQVKLAAFSLTDVWCSLKDLMHLVSQNRHS 866

Query: 361  ELDERDKTYLKFLMRMRHQVSHFVSTLQQYVQSELSHVSWSRFLHSLKHQVRDMFDLESV 540
             L  +   +L  L++ RHQV+HFVSTLQQYVQS LSHVSW RFL SL H+V+DM DLESV
Sbjct: 867  SLHGQKIQHLHILIKTRHQVNHFVSTLQQYVQSHLSHVSWCRFLQSLNHKVKDMMDLESV 926

Query: 541  HMAYLADSLHTCFLSDETQAIAGIIESILQCALDFRSCFTVGCWEIGSDCRDSSKFLGRL 720
            HM YL DSLH CFLSD T+++A +IESILQCA+DFR C T   WE+  D  D    L ++
Sbjct: 927  HMTYLMDSLHVCFLSDATRSVATVIESILQCAVDFRFCLTGCTWEVKQDQGDVFSKLSQI 986

Query: 721  NISQVLTIKATFDKNLKELYLCYLKSPKHGEFSLCRFWGHLNYNDYYS 864
            NI+QVL IK  FDKNLKELYLCYLKSPKHGEF L RFWG+LNYN+YYS
Sbjct: 987  NITQVLAIKRAFDKNLKELYLCYLKSPKHGEFGLSRFWGYLNYNEYYS 1034


>ref|XP_002273254.1| PREDICTED: uncharacterized protein LOC100255993 [Vitis vinifera]
          Length = 1239

 Score =  411 bits (1056), Expect = e-112
 Identities = 194/288 (67%), Positives = 235/288 (81%)
 Frame = +1

Query: 1    KWSVAEASEKISEIQGFLDLAVQRSSCEGDPYKERLYLYMKGPGMVPLATPANGVHAFDF 180
            +W+V EA +++SEIQG L+L++QRSSCE D  K++L++YMKG  M PL+T + GVH+F F
Sbjct: 943  RWNVTEADQRLSEIQGLLELSLQRSSCERDLKKDKLFVYMKGHAMAPLSTFSTGVHSFSF 1002

Query: 181  IALGYRVDWPVSIVLTPSALKIYADIFSFLIQVKLAAFSLTDVWCTMKDLVHLISQNCNS 360
            + LGYRVDWP+SI+LTP ALKIYADIFSFLIQVKLAAFSLTDVWC++KDL+HL+SQN +S
Sbjct: 1003 LGLGYRVDWPISIILTPGALKIYADIFSFLIQVKLAAFSLTDVWCSLKDLMHLVSQNRHS 1062

Query: 361  ELDERDKTYLKFLMRMRHQVSHFVSTLQQYVQSELSHVSWSRFLHSLKHQVRDMFDLESV 540
             L  +   +L  L++ RHQV+HFVSTLQQYVQS LSHVSW RFL SL H+V+DM DLESV
Sbjct: 1063 SLHGQKIQHLHILIKTRHQVNHFVSTLQQYVQSHLSHVSWCRFLQSLNHKVKDMMDLESV 1122

Query: 541  HMAYLADSLHTCFLSDETQAIAGIIESILQCALDFRSCFTVGCWEIGSDCRDSSKFLGRL 720
            HM YL DSLH CFLSD T+++A +IESILQCA+DFR C T   WE+  D  D    L ++
Sbjct: 1123 HMTYLMDSLHVCFLSDATRSVATVIESILQCAVDFRFCLTGCTWEVKQDQGDVFSKLSQI 1182

Query: 721  NISQVLTIKATFDKNLKELYLCYLKSPKHGEFSLCRFWGHLNYNDYYS 864
            NI+QVL IK  FDKNLKELYLCYLKSPKHGEF L RFWG+LNYN+YYS
Sbjct: 1183 NITQVLAIKRAFDKNLKELYLCYLKSPKHGEFGLSRFWGYLNYNEYYS 1230


>ref|XP_002515845.1| gamma-tubulin complex component, putative [Ricinus communis]
            gi|223545000|gb|EEF46514.1| gamma-tubulin complex
            component, putative [Ricinus communis]
          Length = 1209

 Score =  379 bits (974), Expect = e-103
 Identities = 185/288 (64%), Positives = 224/288 (77%)
 Frame = +1

Query: 1    KWSVAEASEKISEIQGFLDLAVQRSSCEGDPYKERLYLYMKGPGMVPLATPANGVHAFDF 180
            KW   EA +++SEIQG L+L+VQRSSCE DP K+RLY+Y+KG  ++PLAT A GVH+FDF
Sbjct: 918  KWRTTEAGQRVSEIQGLLELSVQRSSCERDPNKDRLYVYIKGNAVIPLATSAIGVHSFDF 977

Query: 181  IALGYRVDWPVSIVLTPSALKIYADIFSFLIQVKLAAFSLTDVWCTMKDLVHLISQNCNS 360
            + LGY VDWP+SI+LTPSALKIY+DIFSFLIQVKLA F+L+DVW ++K L+  I      
Sbjct: 978  LGLGYHVDWPLSIILTPSALKIYSDIFSFLIQVKLAIFALSDVWRSLKVLISRILH---- 1033

Query: 361  ELDERDKTYLKFLMRMRHQVSHFVSTLQQYVQSELSHVSWSRFLHSLKHQVRDMFDLESV 540
             L   + T    L   R QV+HF+STLQQYVQS+LSH+SW RFLH+LK++V+DM DLESV
Sbjct: 1034 -LQTGNYTNFISLTYDRQQVNHFISTLQQYVQSQLSHISWCRFLHNLKYKVKDMMDLESV 1092

Query: 541  HMAYLADSLHTCFLSDETQAIAGIIESILQCALDFRSCFTVGCWEIGSDCRDSSKFLGRL 720
            HM YL DSLH CFLSDET+ +A IIESILQCAL+FR+C T   W++G D       L R+
Sbjct: 1093 HMEYLTDSLHICFLSDETRPVASIIESILQCALNFRACLTTSIWDVGLDEGGLRGKLSRI 1152

Query: 721  NISQVLTIKATFDKNLKELYLCYLKSPKHGEFSLCRFWGHLNYNDYYS 864
            NISQVL IK  FDKNLKEL+LCY KSPKHGEF L  FWGHLNYN+YY+
Sbjct: 1153 NISQVLAIKQKFDKNLKELHLCYHKSPKHGEFGLYCFWGHLNYNEYYT 1200


>ref|XP_003636002.1| Gamma-tubulin complex component [Medicago truncatula]
            gi|355501937|gb|AES83140.1| Gamma-tubulin complex
            component [Medicago truncatula]
          Length = 1206

 Score =  358 bits (920), Expect = 1e-96
 Identities = 181/328 (55%), Positives = 227/328 (69%), Gaps = 38/328 (11%)
 Frame = +1

Query: 1    KWSVAEASEKISEIQGFLDLAVQRSSCEGDPYKERLYLYMKGPGMVPLATPANGVHAFDF 180
            KWSV EA+E++ EIQG L+L++Q+SSCE D  K RL++YMKG G +PL+  A G+ +FDF
Sbjct: 875  KWSVTEATERLPEIQGLLELSIQKSSCEQDTNKNRLFVYMKGRGKLPLSASAIGLRSFDF 934

Query: 181  IALGYRVDWPVSIVLTPSALKIYADIFSFLIQVKLAAFSLTDVWCTMKDLVHLISQNCNS 360
            + LGY VDWP+ I+LTP+ALKIYADIFSFLIQVKLA FSLTDVWC++KD+ H  ++  N+
Sbjct: 935  LGLGYHVDWPLCIILTPAALKIYADIFSFLIQVKLALFSLTDVWCSLKDMAHTTNKGLNA 994

Query: 361  ELDERDKTYLKFLMRM--------------------RHQVSHFVSTLQQYVQSELSHVSW 480
            E  +    +L  LM+M                    RHQ+SHFVSTLQQYV+S+LSHVSW
Sbjct: 995  EPYQPGAGHLNILMKMRYMYWIFFGKSGTMNYVFYDRHQISHFVSTLQQYVESQLSHVSW 1054

Query: 481  SRFLHSLKHQVRDMFDLESVHMAYLADSLHTCFLSDETQAIAGIIESILQCALDFRSCFT 660
             RFLHSL+H+V+DM DLESVH  YLADSL  CFLSDET+A+  IIESILQCALDFRSC T
Sbjct: 1055 CRFLHSLQHKVKDMMDLESVHTEYLADSLSICFLSDETKAVGSIIESILQCALDFRSCLT 1114

Query: 661  VGCWEIGSDCRDSSKFLGRLNIS------------------QVLTIKATFDKNLKELYLC 786
            +G       CR     L  +NIS                  QVL+IK  F+++L EL++C
Sbjct: 1115 IGA------CRGDLGELSTINISQLMGTKYWILTPAVSNYFQVLSIKQKFERSLNELHVC 1168

Query: 787  YLKSPKHGEFSLCRFWGHLNYNDYYSTV 870
            Y+K P+H  F L RFW +LNYN+YYS V
Sbjct: 1169 YVKEPRHVNFGLSRFWEYLNYNEYYSNV 1196


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