BLASTX nr result

ID: Cimicifuga21_contig00008656 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00008656
         (835 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002275624.1| PREDICTED: oxygen-evolving enhancer protein ...   287   2e-75
emb|CBI23524.3| unnamed protein product [Vitis vinifera]              280   2e-73
ref|XP_002305643.1| hypothetical protein POPTRDRAFT_831063 [Popu...   280   4e-73
ref|NP_001236541.1| uncharacterized protein LOC100306034 [Glycin...   276   4e-72
gb|ABK95035.1| unknown [Populus trichocarpa]                          271   1e-70

>ref|XP_002275624.1| PREDICTED: oxygen-evolving enhancer protein 3-2, chloroplastic
           [Vitis vinifera]
          Length = 231

 Score =  287 bits (735), Expect = 2e-75
 Identities = 155/235 (65%), Positives = 178/235 (75%)
 Frame = +2

Query: 83  MAQAMASMAGLHGTSQAVLEGSLQLSGSNRLSMAGNSRVVVSRPSFAVRAQQVSTESEAV 262
           MAQAMASMAGL G+SQAVLEGSLQ+SGS RLS   +SRV V+RP F+VRAQQ   E E  
Sbjct: 1   MAQAMASMAGLRGSSQAVLEGSLQISGSTRLSSGSSSRVGVARPGFSVRAQQAPVEPE-- 58

Query: 263 AQSGRRAMLGLVAAGLATGSFVQAVLAEPKSIKVXXXXXXXXXXXXTENSDEARDFDLPL 442
             + RRA+LGLVAAGLA+GSFVQAVLAE KSIKV            T NSDEARD DLPL
Sbjct: 59  --TSRRAVLGLVAAGLASGSFVQAVLAEAKSIKVGPPPPPSGGLPGTLNSDEARDLDLPL 116

Query: 443 KQRFYLQSLPPTXXXXXXXXXXXEILGVKDLIDKKAWPYVQGDLRNKASYLRFDLNTIIS 622
           K RF++Q LPP            +I+GVK LIDKKAWPYVQ DLR KA YLR+DLNT+IS
Sbjct: 117 KDRFFIQPLPPAAAAVRAKESAKDIVGVKTLIDKKAWPYVQMDLRLKAEYLRYDLNTVIS 176

Query: 623 SKPKDEKKILKDLAGKLFENIDGLDHAAKIKSSTEAQKYYASTITALNNVLAKIG 787
           +KPKDEKK LK+L GKLF  I  LDHAAKIKSS +A+KYYA+T++ LN+VL+KIG
Sbjct: 177 AKPKDEKKSLKELTGKLFSTISDLDHAAKIKSSPDAEKYYAATVSTLNDVLSKIG 231


>emb|CBI23524.3| unnamed protein product [Vitis vinifera]
          Length = 227

 Score =  280 bits (717), Expect = 2e-73
 Identities = 151/231 (65%), Positives = 174/231 (75%)
 Frame = +2

Query: 95  MASMAGLHGTSQAVLEGSLQLSGSNRLSMAGNSRVVVSRPSFAVRAQQVSTESEAVAQSG 274
           MASMAGL G+SQAVLEGSLQ+SGS RLS   +SRV V+RP F+VRAQQ   E E    + 
Sbjct: 1   MASMAGLRGSSQAVLEGSLQISGSTRLSSGSSSRVGVARPGFSVRAQQAPVEPE----TS 56

Query: 275 RRAMLGLVAAGLATGSFVQAVLAEPKSIKVXXXXXXXXXXXXTENSDEARDFDLPLKQRF 454
           RRA+LGLVAAGLA+GSFVQAVLAE KSIKV            T NSDEARD DLPLK RF
Sbjct: 57  RRAVLGLVAAGLASGSFVQAVLAEAKSIKVGPPPPPSGGLPGTLNSDEARDLDLPLKDRF 116

Query: 455 YLQSLPPTXXXXXXXXXXXEILGVKDLIDKKAWPYVQGDLRNKASYLRFDLNTIISSKPK 634
           ++Q LPP            +I+GVK LIDKKAWPYVQ DLR KA YLR+DLNT+IS+KPK
Sbjct: 117 FIQPLPPAAAAVRAKESAKDIVGVKTLIDKKAWPYVQMDLRLKAEYLRYDLNTVISAKPK 176

Query: 635 DEKKILKDLAGKLFENIDGLDHAAKIKSSTEAQKYYASTITALNNVLAKIG 787
           DEKK LK+L GKLF  I  LDHAAKIKSS +A+KYYA+T++ LN+VL+KIG
Sbjct: 177 DEKKSLKELTGKLFSTISDLDHAAKIKSSPDAEKYYAATVSTLNDVLSKIG 227


>ref|XP_002305643.1| hypothetical protein POPTRDRAFT_831063 [Populus trichocarpa]
           gi|118486762|gb|ABK95216.1| unknown [Populus
           trichocarpa] gi|222848607|gb|EEE86154.1| hypothetical
           protein POPTRDRAFT_831063 [Populus trichocarpa]
          Length = 234

 Score =  280 bits (715), Expect = 4e-73
 Identities = 157/238 (65%), Positives = 178/238 (74%), Gaps = 3/238 (1%)
 Frame = +2

Query: 83  MAQAMASMAGLHGTSQAVLEGSLQLSGSNRLSM--AGNSRVVVSRPSFAVRAQQ-VSTES 253
           MAQAMASMAGL GTSQAVLEGSLQLSGSNRL    +  +RV V+RP  AVRAQQ VS E 
Sbjct: 1   MAQAMASMAGLRGTSQAVLEGSLQLSGSNRLLNVPSNTTRVAVARPGLAVRAQQQVSGEL 60

Query: 254 EAVAQSGRRAMLGLVAAGLATGSFVQAVLAEPKSIKVXXXXXXXXXXXXTENSDEARDFD 433
           E    + RRAMLGLVAAGLA+GSFVQ VLA+   IK+            T NSDEARDFD
Sbjct: 61  E----TSRRAMLGLVAAGLASGSFVQVVLADALPIKLGPPPPPSGGLPGTLNSDEARDFD 116

Query: 434 LPLKQRFYLQSLPPTXXXXXXXXXXXEILGVKDLIDKKAWPYVQGDLRNKASYLRFDLNT 613
           LPLKQRF+LQ LPP            +ILGVK LID+KAWPYVQ DLR KA YLRFDLNT
Sbjct: 117 LPLKQRFFLQPLPPAEAAVRAKESAKDILGVKSLIDQKAWPYVQNDLRLKAGYLRFDLNT 176

Query: 614 IISSKPKDEKKILKDLAGKLFENIDGLDHAAKIKSSTEAQKYYASTITALNNVLAKIG 787
           +IS+K KDEKK LK+L GKLF+ I  LDHAAKIKS+ EA+KYYA T+++LN+VLAK+G
Sbjct: 177 VISAKSKDEKKSLKELTGKLFDTISNLDHAAKIKSTPEAEKYYAQTVSSLNDVLAKLG 234


>ref|NP_001236541.1| uncharacterized protein LOC100306034 [Glycine max]
           gi|255627343|gb|ACU14016.1| unknown [Glycine max]
          Length = 234

 Score =  276 bits (706), Expect = 4e-72
 Identities = 151/236 (63%), Positives = 174/236 (73%), Gaps = 1/236 (0%)
 Frame = +2

Query: 83  MAQAMASMAGLHGTSQAVLEGSLQLSGSNRLSMAGNSRVV-VSRPSFAVRAQQVSTESEA 259
           MAQAMASMAGL G+SQAVLEGSLQ+SGS RL++   SRV   +R  F VR QQ     E 
Sbjct: 1   MAQAMASMAGLRGSSQAVLEGSLQVSGSTRLNVGSGSRVASATRAGFTVRVQQQQVSGEV 60

Query: 260 VAQSGRRAMLGLVAAGLATGSFVQAVLAEPKSIKVXXXXXXXXXXXXTENSDEARDFDLP 439
             QS RRA+L LVAAGLATGSFVQAVLA+ KSIKV            T NSDEARD  LP
Sbjct: 61  --QSSRRAVLSLVAAGLATGSFVQAVLADTKSIKVGPPPPPSGGLPGTLNSDEARDLQLP 118

Query: 440 LKQRFYLQSLPPTXXXXXXXXXXXEILGVKDLIDKKAWPYVQGDLRNKASYLRFDLNTII 619
           LK RF+LQ L PT           EI+GVK LI+KKAWPYVQ DLR +A YLRFDLNT+I
Sbjct: 119 LKDRFFLQPLSPTEAAQRAKESAKEIVGVKKLIEKKAWPYVQNDLRLRAEYLRFDLNTVI 178

Query: 620 SSKPKDEKKILKDLAGKLFENIDGLDHAAKIKSSTEAQKYYASTITALNNVLAKIG 787
           + KPKDEKK LK+L GKLF++I  LDHAAKIKSS EA+KYYA+T+++LN+VLAK+G
Sbjct: 179 AGKPKDEKKSLKELTGKLFQDISNLDHAAKIKSSPEAEKYYAATVSSLNDVLAKLG 234


>gb|ABK95035.1| unknown [Populus trichocarpa]
          Length = 234

 Score =  271 bits (694), Expect = 1e-70
 Identities = 154/238 (64%), Positives = 174/238 (73%), Gaps = 3/238 (1%)
 Frame = +2

Query: 83  MAQAMASMAGLHGTSQAVLEGSLQLSGSNRLSM--AGNSRVVVSRPSFAVRAQQ-VSTES 253
           MAQAMASMAGL GTSQAVLEGSLQLSGSNRL    +  +RV V+ P   V+AQQ VS E 
Sbjct: 1   MAQAMASMAGLRGTSQAVLEGSLQLSGSNRLLKVPSNTARVAVALPGLTVKAQQQVSAEP 60

Query: 254 EAVAQSGRRAMLGLVAAGLATGSFVQAVLAEPKSIKVXXXXXXXXXXXXTENSDEARDFD 433
           E    + RR MLGLVAAGLA+GSFVQAVLA    IKV            T NSDEARD  
Sbjct: 61  E----TSRRGMLGLVAAGLASGSFVQAVLAAALPIKVGPPPAPSGGLTGTLNSDEARDLV 116

Query: 434 LPLKQRFYLQSLPPTXXXXXXXXXXXEILGVKDLIDKKAWPYVQGDLRNKASYLRFDLNT 613
           LPLK+RF+LQ LPP            EI+GVK LIDKKAWPYVQ DLR KASYLR+DLNT
Sbjct: 117 LPLKERFFLQPLPPAAAAARAKESAKEIIGVKGLIDKKAWPYVQNDLRLKASYLRYDLNT 176

Query: 614 IISSKPKDEKKILKDLAGKLFENIDGLDHAAKIKSSTEAQKYYASTITALNNVLAKIG 787
           +IS+K KDEKK LK+L GKLF+ I  LDHAAKIKS+ EA+KYYA T++ALN+VLAK+G
Sbjct: 177 VISAKSKDEKKSLKELTGKLFDTIGNLDHAAKIKSTPEAEKYYAQTVSALNDVLAKLG 234


Top