BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00008654
         (316 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003550712.1| PREDICTED: pentatricopeptide repeat-containi...   164   5e-39
ref|XP_004138087.1| PREDICTED: pentatricopeptide repeat-containi...   162   2e-38
ref|XP_002511313.1| pentatricopeptide repeat-containing protein,...   161   5e-38
ref|XP_002277390.1| PREDICTED: pentatricopeptide repeat-containi...   158   4e-37
ref|XP_002321639.1| predicted protein [Populus trichocarpa] gi|2...   158   5e-37

>ref|XP_003550712.1| PREDICTED: pentatricopeptide repeat-containing protein At3g48250,
           chloroplastic-like [Glycine max]
          Length = 635

 Score =  164 bits (416), Expect = 5e-39
 Identities = 77/105 (73%), Positives = 89/105 (84%)
 Frame = +2

Query: 2   FRVVKKCEATGHTLSKAAYDGILRSLTSVGRFDEAEKILDTMRNAGYKPDNITYSPLVFG 181
           FRV KK E+TGHTLSKA YDGI RSLTS G FDEAE I+ TMRNAGY+PDNITYS +VFG
Sbjct: 356 FRVAKKYESTGHTLSKAIYDGIHRSLTSAGNFDEAENIVRTMRNAGYEPDNITYSQMVFG 415

Query: 182 LCKVGRLEEACKVLDEMEAQGCVPDIKTWTVLIQGHFIAGEIDQA 316
           LCK+ R EEACKVL++ME+  C+PDIKTWT+LIQGH  A E+D+A
Sbjct: 416 LCKMRRFEEACKVLEDMESSRCIPDIKTWTILIQGHCSANEVDKA 460


>ref|XP_004138087.1| PREDICTED: pentatricopeptide repeat-containing protein At3g48250,
           chloroplastic-like [Cucumis sativus]
           gi|449524136|ref|XP_004169079.1| PREDICTED:
           pentatricopeptide repeat-containing protein At3g48250,
           chloroplastic-like [Cucumis sativus]
          Length = 632

 Score =  162 bits (411), Expect = 2e-38
 Identities = 78/105 (74%), Positives = 90/105 (85%)
 Frame = +2

Query: 2   FRVVKKCEATGHTLSKAAYDGILRSLTSVGRFDEAEKILDTMRNAGYKPDNITYSPLVFG 181
           +RV KK EATG++LSKA YDGI RSLTS G+FD+AE I+ +MRNAGY+PDN+TYS LVFG
Sbjct: 350 YRVAKKFEATGYSLSKAMYDGIHRSLTSTGKFDDAENIVKSMRNAGYEPDNVTYSQLVFG 409

Query: 182 LCKVGRLEEACKVLDEMEAQGCVPDIKTWTVLIQGHFIAGEIDQA 316
           LCK  RLEEA KVLDEMEAQGC+PDIKTWT+LIQGH  A E+D A
Sbjct: 410 LCKARRLEEARKVLDEMEAQGCIPDIKTWTILIQGHCNANELDIA 454


>ref|XP_002511313.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223550428|gb|EEF51915.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 627

 Score =  161 bits (408), Expect = 5e-38
 Identities = 76/105 (72%), Positives = 89/105 (84%)
 Frame = +2

Query: 2   FRVVKKCEATGHTLSKAAYDGILRSLTSVGRFDEAEKILDTMRNAGYKPDNITYSPLVFG 181
           FRVV K EATG++LSKA YDGI RSLTS+G FDEA K++  M+ AGY+PDNITYS LVFG
Sbjct: 355 FRVVNKYEATGNSLSKAVYDGIHRSLTSIGNFDEAAKMMKCMQTAGYEPDNITYSQLVFG 414

Query: 182 LCKVGRLEEACKVLDEMEAQGCVPDIKTWTVLIQGHFIAGEIDQA 316
           LCK  RLEEAC+VLDEMEA GC+PDIKTWT+LIQGH +A E+ +A
Sbjct: 415 LCKARRLEEACEVLDEMEAHGCLPDIKTWTILIQGHCVANEVGKA 459


>ref|XP_002277390.1| PREDICTED: pentatricopeptide repeat-containing protein At3g48250,
           chloroplastic-like [Vitis vinifera]
          Length = 631

 Score =  158 bits (400), Expect = 4e-37
 Identities = 76/105 (72%), Positives = 90/105 (85%)
 Frame = +2

Query: 2   FRVVKKCEATGHTLSKAAYDGILRSLTSVGRFDEAEKILDTMRNAGYKPDNITYSPLVFG 181
           FRV +K EA G++L KA YDGI RSLTSVGRFDEA KI+++MR+AG +PDNITYS LV+G
Sbjct: 357 FRVTEKYEAVGNSLCKAVYDGIHRSLTSVGRFDEAGKIMESMRSAGCEPDNITYSQLVYG 416

Query: 182 LCKVGRLEEACKVLDEMEAQGCVPDIKTWTVLIQGHFIAGEIDQA 316
           LCK  +LEEACK+LDEMEA GCVPDIKTWT+LIQGH  A E+D+A
Sbjct: 417 LCKARKLEEACKLLDEMEACGCVPDIKTWTILIQGHCAAKEVDKA 461


>ref|XP_002321639.1| predicted protein [Populus trichocarpa] gi|222868635|gb|EEF05766.1|
           predicted protein [Populus trichocarpa]
          Length = 476

 Score =  158 bits (399), Expect = 5e-37
 Identities = 74/103 (71%), Positives = 88/103 (85%)
 Frame = +2

Query: 5   RVVKKCEATGHTLSKAAYDGILRSLTSVGRFDEAEKILDTMRNAGYKPDNITYSPLVFGL 184
           RVV   +ATG++LSK+ YDG+ RS TS G+FDEAEKI+  MR+AGY+PDNITYS LVFGL
Sbjct: 205 RVVDGYKATGNSLSKSVYDGMHRSFTSAGKFDEAEKIVKAMRDAGYEPDNITYSQLVFGL 264

Query: 185 CKVGRLEEACKVLDEMEAQGCVPDIKTWTVLIQGHFIAGEIDQ 313
           CK  RLEEACKVLDEMEA GC+PDIKTWT+LIQGHF A ++D+
Sbjct: 265 CKSKRLEEACKVLDEMEAGGCIPDIKTWTILIQGHFAANQVDK 307