BLASTX nr result

ID: Cimicifuga21_contig00008628 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00008628
         (1102 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002269262.1| PREDICTED: uncharacterized protein LOC100255...   254   3e-65
ref|XP_002527805.1| conserved hypothetical protein [Ricinus comm...   219   7e-55
ref|XP_002324697.1| predicted protein [Populus trichocarpa] gi|2...   204   3e-50
ref|NP_567837.1| uncharacterized protein [Arabidopsis thaliana] ...   204   4e-50
ref|XP_002867378.1| hypothetical protein ARALYDRAFT_491758 [Arab...   202   9e-50

>ref|XP_002269262.1| PREDICTED: uncharacterized protein LOC100255532 [Vitis vinifera]
            gi|296090285|emb|CBI40104.3| unnamed protein product
            [Vitis vinifera]
          Length = 290

 Score =  254 bits (648), Expect = 3e-65
 Identities = 147/273 (53%), Positives = 169/273 (61%), Gaps = 12/273 (4%)
 Frame = -1

Query: 1006 ILSMADFPTSPNGDVQMFPIMYPALVPGFIPMQNQELTNRGAGIYAVPVLPFMGPMSGNP 827
            I + + FP SPNG++QMFPIMYPALVPG I +QNQE  NRGAGIYAVPV P MGP+SG P
Sbjct: 25   IPTFSGFPVSPNGNIQMFPIMYPALVPGLISLQNQEQVNRGAGIYAVPVPPLMGPISGLP 84

Query: 826  FNTLIPLTYSVPTRTSSTEGGAVSEEHGQ------EXXXXXXXXXXXXXRFHFAFQNDLF 665
             N LIPLTY++PTRTSS+EGG V EEHGQ      +             RF  AFQ D+ 
Sbjct: 85   SNALIPLTYNIPTRTSSSEGGPVGEEHGQVGQPQPQQQQPVPQRQVAVRRFQIAFQLDVM 144

Query: 664  FILRLAIVIYLFNRDGLFNRDGSRQKTIMLLFFASLVYLYQTGALTPLIRWLSQGMHRAI 485
             IL+L  V++      LFN+DGSRQ+ ++L+FFASL+YL+QTGALTP IRWLSQGM RA 
Sbjct: 145  LILKLIAVVF------LFNQDGSRQRLVILVFFASLIYLHQTGALTPFIRWLSQGMQRA- 197

Query: 484  AXXXXXXXXXXRAENAPGAVGPEGENAARAEG------XXXXXXXXXXXXXXXXXXXXXX 323
            A          RAEN P AV    ENAA AEG                            
Sbjct: 198  AAPPQPPRPAVRAENVPAAVRQGNENAAMAEGQAGAADQNQQAEDGNEAIENENIAEGGG 257

Query: 322  XXXXXNWRVIVKEIQMIVVGFITSLLPGFHNAD 224
                 +W  IVKEIQMIVVGFITSLLPGFHN D
Sbjct: 258  GDGGNHWWGIVKEIQMIVVGFITSLLPGFHNVD 290


>ref|XP_002527805.1| conserved hypothetical protein [Ricinus communis]
            gi|223532801|gb|EEF34577.1| conserved hypothetical
            protein [Ricinus communis]
          Length = 287

 Score =  219 bits (559), Expect = 7e-55
 Identities = 136/288 (47%), Positives = 165/288 (57%), Gaps = 16/288 (5%)
 Frame = -1

Query: 1039 RDKKSSNRTSVILSMADFPTSPNGDVQMFPIMYPALVPGFIP-MQNQELTNRGAGIYAVP 863
            R+    N    +L+ +  P  P GD+QM+PI+YPA+VPGF P +QNQ+  +RGAGIYAVP
Sbjct: 8    RNSPEDNSKHHVLACSSLPPYPFGDLQMYPIVYPAMVPGFTPSLQNQDQMHRGAGIYAVP 67

Query: 862  VLPFMGPMSGNPFNTLIPLTYSVPTRTSSTEGGAVSE---------EHGQEXXXXXXXXX 710
            V P MGP++G P NTLIPLTY+VPT  SS+  GA S+         +H Q+         
Sbjct: 68   VPPVMGPIAGFPSNTLIPLTYNVPTTRSSSNAGAPSDHGQGGQQPQQHQQQQQQPAAQRQ 127

Query: 709  XXXXRFHFAFQNDLFFILRLAIVIYLFNRDGLFNRDGSRQKTIMLLFFASLVYLYQTGAL 530
                RF  AFQ DL  IL+LA VI+LFN+DG      SRQ+ ++L+FFASLVYLYQTGAL
Sbjct: 128  VVVRRFQIAFQLDLLLILKLAAVIFLFNQDG------SRQRLVVLVFFASLVYLYQTGAL 181

Query: 529  TPLIRWLSQGMHRAIAXXXXXXXXXXRAENAPGAVGPEGENAARAEGXXXXXXXXXXXXX 350
            TPL++WLSQ M RA A          R ENAP  V  + E  A AEG             
Sbjct: 182  TPLVQWLSQSMQRA-AQPPRPPRPVVRPENAP-PVARQNEIVALAEGQAVADNESHPPED 239

Query: 349  XXXXXXXXXXXXXXN------WRVIVKEIQMIVVGFITSLLPGFHNAD 224
                                 W  IVKEIQM+V GFITSLLPGFHN D
Sbjct: 240  GNQAVENENIVEPGEGDGGNNWWGIVKEIQMVVFGFITSLLPGFHNVD 287


>ref|XP_002324697.1| predicted protein [Populus trichocarpa] gi|222866131|gb|EEF03262.1|
            predicted protein [Populus trichocarpa]
          Length = 290

 Score =  204 bits (519), Expect = 3e-50
 Identities = 124/267 (46%), Positives = 150/267 (56%), Gaps = 8/267 (2%)
 Frame = -1

Query: 1000 SMADFPTSPNGDVQMFPIMYPALVPGFIPMQNQELTNRGAGIYAVPVLPFMGPMSGNPFN 821
            + + FP  P+G  QMFP+MYPALVPG   MQNQE  N G GIYAVPV  FMGP++G P N
Sbjct: 34   AFSGFPAYPDGGFQMFPVMYPALVPGLNAMQNQEQANHGPGIYAVPVPQFMGPIAGLPSN 93

Query: 820  TLIPLTYSVPTRTSSTEGGAVSEEHG--QEXXXXXXXXXXXXXRFHFAFQNDLFFILRLA 647
            TLIPLT ++PTR +   G    +  G  Q+             RF  AF+ DLF IL+LA
Sbjct: 94   TLIPLTLNIPTRPTPEAGATSDQAQGGQQQLQQPAAQRQIVVRRFQIAFELDLFLILKLA 153

Query: 646  IVIYLFNRDGLFNRDGSRQKTIMLLFFASLVYLYQTGALTPLIRWLSQGMHRAIAXXXXX 467
             VI+      LF++DGSRQ+ ++L+F ASLVYLYQTGALTPL++WLSQ M RA A     
Sbjct: 154  AVIF------LFHQDGSRQRLLVLVFLASLVYLYQTGALTPLVQWLSQSMQRAAA----P 203

Query: 466  XXXXXRAENAPGAVGPEGENAARAEG------XXXXXXXXXXXXXXXXXXXXXXXXXXXN 305
                  A  A  A   + E+ A AEG                                 +
Sbjct: 204  PRPPRPAVRAENAAIRQNEDVALAEGQPAVENENRPAEDGNQAAENENVAEPGGDNGGHH 263

Query: 304  WRVIVKEIQMIVVGFITSLLPGFHNAD 224
            W  IVKEIQMIV GFITSLLPGFH+ D
Sbjct: 264  WWGIVKEIQMIVFGFITSLLPGFHHID 290


>ref|NP_567837.1| uncharacterized protein [Arabidopsis thaliana]
            gi|4914420|emb|CAB43671.1| hypothetical protein
            [Arabidopsis thaliana] gi|7269895|emb|CAB79754.1|
            hypothetical protein [Arabidopsis thaliana]
            gi|20466466|gb|AAM20550.1| unknown protein [Arabidopsis
            thaliana] gi|21537007|gb|AAM61348.1| unknown [Arabidopsis
            thaliana] gi|22136434|gb|AAM91295.1| unknown protein
            [Arabidopsis thaliana] gi|332660302|gb|AEE85702.1|
            uncharacterized protein [Arabidopsis thaliana]
          Length = 291

 Score =  204 bits (518), Expect = 4e-50
 Identities = 121/264 (45%), Positives = 143/264 (54%), Gaps = 5/264 (1%)
 Frame = -1

Query: 1000 SMADFPTSPNGDVQMFPIMYPALVPGFIPMQNQELTNRGAGIYAVPVLPFMGPMSGNPFN 821
            S + F   PNGD  M+P+ YP LVPG  P+Q +E  NRGAGIYAVPV  F G ++G P N
Sbjct: 34   SSSGFRAYPNGDSPMYPVFYPGLVPGSNPVQYEEQMNRGAGIYAVPVHQFGGHVAGLPSN 93

Query: 820  TLIPLTYSVPTRTSSTEGGAVSEE-----HGQEXXXXXXXXXXXXXRFHFAFQNDLFFIL 656
             LIPLTY+VPT   + E     E       GQ+             RF  AFQ DLF IL
Sbjct: 94   YLIPLTYNVPTTRPNNEAETGGENQAQAGQGQQQQLPANQRHVVERRFQIAFQLDLFLIL 153

Query: 655  RLAIVIYLFNRDGLFNRDGSRQKTIMLLFFASLVYLYQTGALTPLIRWLSQGMHRAIAXX 476
            +LA VI+      LFN+DGSRQ+  +L+ FA+++YLYQTGAL P +RWLSQGMHRA    
Sbjct: 154  KLAAVIF------LFNQDGSRQRLAVLVIFATIIYLYQTGALAPFVRWLSQGMHRAAVPP 207

Query: 475  XXXXXXXXRAENAPGAVGPEGENAARAEGXXXXXXXXXXXXXXXXXXXXXXXXXXXNWRV 296
                    RA+N P A  P  ENA                                 W  
Sbjct: 208  ARPHRPAVRADNDPAAAVPLNENAVLEGEENEADNGNRARANANENENVDAGNQGNQWWG 267

Query: 295  IVKEIQMIVVGFITSLLPGFHNAD 224
            IVKEIQMIV GFITSLLPGFHN +
Sbjct: 268  IVKEIQMIVFGFITSLLPGFHNIE 291


>ref|XP_002867378.1| hypothetical protein ARALYDRAFT_491758 [Arabidopsis lyrata subsp.
            lyrata] gi|297313214|gb|EFH43637.1| hypothetical protein
            ARALYDRAFT_491758 [Arabidopsis lyrata subsp. lyrata]
          Length = 283

 Score =  202 bits (515), Expect = 9e-50
 Identities = 123/264 (46%), Positives = 145/264 (54%), Gaps = 5/264 (1%)
 Frame = -1

Query: 1000 SMADFPTSPNGDVQMFPIMYPALVPGFIPMQNQELTNRGAGIYAVPVLPFMGPMSGNPFN 821
            S + F   PNGD  M+P+ YP LVPG  P+Q +E  NRGAGIYAVPV  F G ++G P N
Sbjct: 28   SSSGFRAYPNGDSPMYPVFYPGLVPGSNPVQYEEQMNRGAGIYAVPVHQFGGHVAGLPSN 87

Query: 820  TLIPLTYSVPTRTSSTEGGAVSEE-----HGQEXXXXXXXXXXXXXRFHFAFQNDLFFIL 656
             LIPLTY+VPT   + E     E       GQ+             RF  AFQ DLF IL
Sbjct: 88   YLIPLTYNVPTTRPNNEAETGGENQAQAGQGQQQQQPANQRHVVERRFQIAFQLDLFLIL 147

Query: 655  RLAIVIYLFNRDGLFNRDGSRQKTIMLLFFASLVYLYQTGALTPLIRWLSQGMHRAIAXX 476
            +LA VI+      LFN+DGSRQ+  +L+ FA+++YLYQTGAL P +RWLSQGMHRA    
Sbjct: 148  KLAAVIF------LFNQDGSRQRLAVLVIFATIIYLYQTGALAPFVRWLSQGMHRAAVPP 201

Query: 475  XXXXXXXXRAENAPGAVGPEGENAARAEGXXXXXXXXXXXXXXXXXXXXXXXXXXXNWRV 296
                    RA+N P A  P  ENA   EG                            W  
Sbjct: 202  PRPHRPAARADNDPAAAVPLNENAV-PEGEENEADNANRANANENENVDAGNQGNQWWG- 259

Query: 295  IVKEIQMIVVGFITSLLPGFHNAD 224
            IVKEIQMIV GFITSLLPGFHN +
Sbjct: 260  IVKEIQMIVFGFITSLLPGFHNIE 283


Top