BLASTX nr result

ID: Cimicifuga21_contig00008589 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00008589
         (656 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002321636.1| predicted protein [Populus trichocarpa] gi|2...    91   1e-16
gb|ABK96228.1| unknown [Populus trichocarpa x Populus deltoides]       85   1e-14
ref|XP_002318072.1| predicted protein [Populus trichocarpa] gi|2...    84   2e-14
gb|ABK94327.1| unknown [Populus trichocarpa] gi|118488675|gb|ABK...    83   5e-14
ref|XP_003634240.1| PREDICTED: uncharacterized protein LOC100855...    80   3e-13

>ref|XP_002321636.1| predicted protein [Populus trichocarpa] gi|222868632|gb|EEF05763.1|
           predicted protein [Populus trichocarpa]
          Length = 112

 Score = 91.3 bits (225), Expect = 1e-16
 Identities = 51/120 (42%), Positives = 67/120 (55%), Gaps = 3/120 (2%)
 Frame = +1

Query: 37  GRENQGNDHHGWHTTSDDYRVHVTKMERMPSTIE-APHYPSLHMLFNNNVIQNEPPTPRE 213
           G  +Q    HGW TTSDDY  +++K+ RMPS +  AP YPS+   FNN   +N   +P+ 
Sbjct: 4   GTVHQTRQQHGWDTTSDDYHAYISKLSRMPSVLHGAPQYPSVRKAFNNK--RNPTKSPK- 60

Query: 214 EHVPLSIEKAQVTESVVPIRQAKNGGHKAHNVD--IDAEAENYISQKHKAFNLCKWLSMK 387
                   K QVTE V  I Q  NG  K+  ++  +D EAE +I QKHK   LCKW + K
Sbjct: 61  --------KVQVTEQVQIIEQ--NGNQKSEVIEETVDHEAEGFIQQKHKGLELCKWKTFK 110


>gb|ABK96228.1| unknown [Populus trichocarpa x Populus deltoides]
          Length = 129

 Score = 85.1 bits (209), Expect = 1e-14
 Identities = 51/126 (40%), Positives = 71/126 (56%), Gaps = 9/126 (7%)
 Frame = +1

Query: 37  GRENQGNDHHGWHTTSDDYRVHVTKMERMPSTIE-APHYPSLHMLFNNNVIQNEPPTP-R 210
           G   Q     G +TTS DY  +++++ +MPS I  AP YPS+H  FNN V Q E     R
Sbjct: 4   GSAYQTRQRQGSNTTSGDYHDYISRLSKMPSIIHGAPQYPSVHKAFNNKVTQEEEVNEAR 63

Query: 211 EEHV-----PLSIEKAQVTESVVPIRQAKNGGHKAHNV--DIDAEAENYISQKHKAFNLC 369
           +++V       S +K +V E V  I Q  NG  K+ ++  D+DAEA+ +I QK K F LC
Sbjct: 64  QDNVNKKNPTRSTKKVRVKEQVQVIDQ--NGNRKSEDIEEDVDAEADGFIKQKQKGFELC 121

Query: 370 KWLSMK 387
           KW + K
Sbjct: 122 KWKTFK 127


>ref|XP_002318072.1| predicted protein [Populus trichocarpa] gi|222858745|gb|EEE96292.1|
           predicted protein [Populus trichocarpa]
          Length = 160

 Score = 84.0 bits (206), Expect = 2e-14
 Identities = 50/132 (37%), Positives = 75/132 (56%), Gaps = 9/132 (6%)
 Frame = +1

Query: 19  AQRVAFGRENQGNDHHGWHTTSDDYRVHVTKMERMPSTIE-APHYPSLHMLFNNNVIQNE 195
           +++++ G   Q     G +TTS DY  +++++ +MPS I  AP YPS+H  FNN V Q E
Sbjct: 29  SKKMSKGSAYQTRQRQGSNTTSGDYHDYISRLSKMPSIIHGAPQYPSVHKAFNNKVTQEE 88

Query: 196 PPTP-REEHV-----PLSIEKAQVTESVVPIRQAKNGGHKAHNV--DIDAEAENYISQKH 351
                R+++V       S +K +V E V  I Q  NG  K+ ++  D+D EA+ +I QK 
Sbjct: 89  EVNEARQDNVNKKNPARSTKKVRVKEQVQVIDQ--NGNRKSEDIEEDVDDEADGFIKQKQ 146

Query: 352 KAFNLCKWLSMK 387
           K F LCKW + K
Sbjct: 147 KGFELCKWKTFK 158


>gb|ABK94327.1| unknown [Populus trichocarpa] gi|118488675|gb|ABK96149.1| unknown
           [Populus trichocarpa]
          Length = 129

 Score = 82.8 bits (203), Expect = 5e-14
 Identities = 50/126 (39%), Positives = 70/126 (55%), Gaps = 9/126 (7%)
 Frame = +1

Query: 37  GRENQGNDHHGWHTTSDDYRVHVTKMERMPSTIE-APHYPSLHMLFNNNVIQNEPPTP-R 210
           G   Q     G +TTS DY  +++++ +MPS I  AP YPS+H  FNN V Q E     R
Sbjct: 4   GSAYQTRQRQGSNTTSGDYHDYISRLSKMPSIIHGAPQYPSVHKAFNNKVTQEEEVNEAR 63

Query: 211 EEHV-----PLSIEKAQVTESVVPIRQAKNGGHKAHNV--DIDAEAENYISQKHKAFNLC 369
           +++V       S +K +V E V  I Q  NG  K+ ++  D+D EA+ +I QK K F LC
Sbjct: 64  QDNVNKKNPARSTKKVRVKEQVQVIDQ--NGNRKSEDIEEDVDDEADGFIKQKQKGFELC 121

Query: 370 KWLSMK 387
           KW + K
Sbjct: 122 KWKTFK 127


>ref|XP_003634240.1| PREDICTED: uncharacterized protein LOC100855230 [Vitis vinifera]
          Length = 162

 Score = 80.1 bits (196), Expect = 3e-13
 Identities = 46/117 (39%), Positives = 63/117 (53%), Gaps = 7/117 (5%)
 Frame = +1

Query: 64  HGWHTTSDDYRVHVTKMERMPSTIE-APHYPSLHMLFNN-NVIQNEPPTPREEHVP--LS 231
           HGW TT DDY  H+ +MER  S +  APHYP +H  FNN +  +      R++  P  +S
Sbjct: 54  HGWDTTPDDYLSHIKRMERSLSIVPGAPHYPVVHKAFNNKSPFEEAQGNGRKQRQPRKVS 113

Query: 232 IEKAQVTESVVPIRQAKNGGHKA---HNVDIDAEAENYISQKHKAFNLCKWLSMKAF 393
            +  Q         Q+ NG  +       DI+AEAE +I QKH+ F LCKW + KA+
Sbjct: 114 FQDQQ--------GQSNNGSSQVVDEETDDIEAEAEGFIQQKHRGFELCKWKTFKAY 162


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