BLASTX nr result

ID: Cimicifuga21_contig00008565 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00008565
         (657 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AFK39456.1| unknown [Medicago truncatula]                          114   2e-23
ref|XP_003600944.1| Zinc/RING finger protein [Medicago truncatul...   114   2e-23
ref|XP_003538474.1| PREDICTED: RING-H2 finger protein ATL66-like...   112   6e-23
ref|XP_003552290.1| PREDICTED: RING-H2 finger protein ATL66-like...   111   1e-22
gb|ACU23806.1| unknown [Glycine max]                                  111   1e-22

>gb|AFK39456.1| unknown [Medicago truncatula]
          Length = 173

 Score =  114 bits (284), Expect = 2e-23
 Identities = 54/147 (36%), Positives = 75/147 (51%), Gaps = 6/147 (4%)
 Frame = +3

Query: 102 WHYGDLDDKNFKLHGHVXXXXXXXXXXXXXXXXXYLFVRWTCKYRRLSXXXXXXXXXXXX 281
           WHY +LDD++ ++ G                   + + RW C+Y                
Sbjct: 11  WHYTELDDRDLEIKGRTLFFVIVLFSIFLLVIVLFFYTRWVCRYHT---HITTTYSASIH 67

Query: 282 XXXXXRPLGLDSVVIDNLPILLYRGSVD------EEAQCSICLSAFQDQEKVKILPGCNH 443
                 P GLD   I  LPI+L++   D      EE +C ICL  F+D EK+K+LPGC H
Sbjct: 68  APPAQPPQGLDPAAIKKLPIILHQAPTDPENGAWEETECCICLGEFRDGEKLKVLPGCEH 127

Query: 444 TYHPECVDKWLSTQSNCPLCRSSLRVD 524
            +H +CVDKWL+ QS+CPLCR SL+V+
Sbjct: 128 YFHCDCVDKWLTHQSSCPLCRGSLKVE 154


>ref|XP_003600944.1| Zinc/RING finger protein [Medicago truncatula]
           gi|355489992|gb|AES71195.1| Zinc/RING finger protein
           [Medicago truncatula]
          Length = 173

 Score =  114 bits (284), Expect = 2e-23
 Identities = 54/147 (36%), Positives = 75/147 (51%), Gaps = 6/147 (4%)
 Frame = +3

Query: 102 WHYGDLDDKNFKLHGHVXXXXXXXXXXXXXXXXXYLFVRWTCKYRRLSXXXXXXXXXXXX 281
           WHY +LDD++ ++ G                   + + RW C+Y                
Sbjct: 11  WHYTELDDRDLEIKGRTLFFVIVLFSIFLLVIVLFFYTRWVCRYHT---HITTTYSASIH 67

Query: 282 XXXXXRPLGLDSVVIDNLPILLYRGSVD------EEAQCSICLSAFQDQEKVKILPGCNH 443
                 P GLD   I  LPI+L++   D      EE +C ICL  F+D EK+K+LPGC H
Sbjct: 68  APPAQPPQGLDPAAIKKLPIILHQAPTDPENGAWEETECCICLGEFRDGEKLKVLPGCEH 127

Query: 444 TYHPECVDKWLSTQSNCPLCRSSLRVD 524
            +H +CVDKWL+ QS+CPLCR SL+V+
Sbjct: 128 YFHCDCVDKWLTHQSSCPLCRGSLKVE 154


>ref|XP_003538474.1| PREDICTED: RING-H2 finger protein ATL66-like [Glycine max]
          Length = 175

 Score =  112 bits (280), Expect = 6e-23
 Identities = 55/149 (36%), Positives = 79/149 (53%), Gaps = 7/149 (4%)
 Frame = +3

Query: 102 WHYGDLDDKNFKLHGHVXXXXXXXXXXXXXXXXXYLFVRWTCKYR-RLSXXXXXXXXXXX 278
           WHY +LDD++ ++ G                   +++ RW C+Y+ RL            
Sbjct: 11  WHYTELDDRDLEIRGRTLFFVIVLFSIILLVTVLFIYTRWVCRYQGRLPTTAFSAAAVHA 70

Query: 279 XXXXXXRPLGLDSVVIDNLPILLYRGSVD------EEAQCSICLSAFQDQEKVKILPGCN 440
                  P GLD   I  LPI+L+    D      +E +C ICL  F+D EKVK+LP C+
Sbjct: 71  PPLAP--PQGLDPASIKKLPIILHHAPADRDESAWDETECCICLGEFRDGEKVKVLPACD 128

Query: 441 HTYHPECVDKWLSTQSNCPLCRSSLRVDS 527
           H +H +CVDKWL+  S+CPLCR+SL+V+S
Sbjct: 129 HYFHCDCVDKWLTHHSSCPLCRASLKVES 157


>ref|XP_003552290.1| PREDICTED: RING-H2 finger protein ATL66-like [Glycine max]
          Length = 175

 Score =  111 bits (278), Expect = 1e-22
 Identities = 52/148 (35%), Positives = 78/148 (52%), Gaps = 6/148 (4%)
 Frame = +3

Query: 102 WHYGDLDDKNFKLHGHVXXXXXXXXXXXXXXXXXYLFVRWTCKYRRLSXXXXXXXXXXXX 281
           WHY +LDD++ ++ G                   +++ RW C+Y+               
Sbjct: 11  WHYTELDDRDLEIRGRTLFFVIVLFSIILLVTVLFIYTRWVCRYQG-RLPTTAFTAAAAH 69

Query: 282 XXXXXRPLGLDSVVIDNLPILLYRGSVD------EEAQCSICLSAFQDQEKVKILPGCNH 443
                +P G+D   I  LPI+L+    D      +E +C ICL  F+D EKVK+LP C+H
Sbjct: 70  APPLAQPQGMDPASIKKLPIILHHAPSDREESAWDETECCICLGEFRDGEKVKVLPACDH 129

Query: 444 TYHPECVDKWLSTQSNCPLCRSSLRVDS 527
            +H +CVDKWL+  S+CPLCR+SL+V+S
Sbjct: 130 YFHCDCVDKWLTHHSSCPLCRASLKVES 157


>gb|ACU23806.1| unknown [Glycine max]
          Length = 175

 Score =  111 bits (278), Expect = 1e-22
 Identities = 52/148 (35%), Positives = 78/148 (52%), Gaps = 6/148 (4%)
 Frame = +3

Query: 102 WHYGDLDDKNFKLHGHVXXXXXXXXXXXXXXXXXYLFVRWTCKYRRLSXXXXXXXXXXXX 281
           WHY +LDD++ ++ G                   +++ RW C+Y+               
Sbjct: 11  WHYTELDDRDLEIRGRTLFFVIVLFSIILLVTVLFIYTRWVCRYQG-RLPTTAFTAAAAH 69

Query: 282 XXXXXRPLGLDSVVIDNLPILLYRGSVD------EEAQCSICLSAFQDQEKVKILPGCNH 443
                +P G+D   I  LPI+L+    D      +E +C ICL  F+D EKVK+LP C+H
Sbjct: 70  ASPLAQPQGMDPASIKKLPIILHHAPSDREESAWDETECCICLGEFRDGEKVKVLPACDH 129

Query: 444 TYHPECVDKWLSTQSNCPLCRSSLRVDS 527
            +H +CVDKWL+  S+CPLCR+SL+V+S
Sbjct: 130 YFHCDCVDKWLTHHSSCPLCRASLKVES 157


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