BLASTX nr result

ID: Cimicifuga21_contig00008553 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00008553
         (791 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003637513.1| Retinol dehydrogenase [Medicago truncatula] ...   218   2e-54
ref|XP_003637512.1| Retinol dehydrogenase [Medicago truncatula] ...   218   2e-54
emb|CAB85991.1| putative protein [Arabidopsis thaliana]               214   2e-53
ref|XP_003542461.1| PREDICTED: retinol dehydrogenase 12-like iso...   211   1e-52
ref|XP_002309049.1| predicted protein [Populus trichocarpa] gi|2...   208   9e-52

>ref|XP_003637513.1| Retinol dehydrogenase [Medicago truncatula]
           gi|355503448|gb|AES84651.1| Retinol dehydrogenase
           [Medicago truncatula]
          Length = 256

 Score =  218 bits (554), Expect = 2e-54
 Identities = 108/150 (72%), Positives = 124/150 (82%), Gaps = 3/150 (2%)
 Frame = -3

Query: 492 NNAGVMFCPYQLSDDGVEMQFATNHLGHFYLTSLLLDKMKNTAQVTGLEGRIVNLSSVAH 313
           NNAGVMFCP+QL+ DG+EMQFATNHLGHF LT+LLL+KMK TA+ TG+EGRI+NLSS+AH
Sbjct: 52  NNAGVMFCPFQLTQDGIEMQFATNHLGHFLLTNLLLEKMKQTAKATGIEGRIINLSSIAH 111

Query: 312 TLAYKEGIRFENLND---IR*KKAYGHSELANILHANELSRRLKK*EEGANITVNSLHPG 142
           T  Y+EGIR +N+ND      KKAYG S+LANILHANELSRRLK  EEG NIT NS+HPG
Sbjct: 112 TYTYEEGIRLDNINDQIGYSDKKAYGQSKLANILHANELSRRLK--EEGVNITANSVHPG 169

Query: 141 LITTNLWRQSSLLKNFLKLITFSFWKNVPQ 52
           +I T L R SSLL NFLK+ TF  WKNVPQ
Sbjct: 170 VIMTPLMRHSSLLMNFLKMFTFYIWKNVPQ 199


>ref|XP_003637512.1| Retinol dehydrogenase [Medicago truncatula]
           gi|355503447|gb|AES84650.1| Retinol dehydrogenase
           [Medicago truncatula]
          Length = 323

 Score =  218 bits (554), Expect = 2e-54
 Identities = 108/150 (72%), Positives = 124/150 (82%), Gaps = 3/150 (2%)
 Frame = -3

Query: 492 NNAGVMFCPYQLSDDGVEMQFATNHLGHFYLTSLLLDKMKNTAQVTGLEGRIVNLSSVAH 313
           NNAGVMFCP+QL+ DG+EMQFATNHLGHF LT+LLL+KMK TA+ TG+EGRI+NLSS+AH
Sbjct: 119 NNAGVMFCPFQLTQDGIEMQFATNHLGHFLLTNLLLEKMKQTAKATGIEGRIINLSSIAH 178

Query: 312 TLAYKEGIRFENLND---IR*KKAYGHSELANILHANELSRRLKK*EEGANITVNSLHPG 142
           T  Y+EGIR +N+ND      KKAYG S+LANILHANELSRRLK  EEG NIT NS+HPG
Sbjct: 179 TYTYEEGIRLDNINDQIGYSDKKAYGQSKLANILHANELSRRLK--EEGVNITANSVHPG 236

Query: 141 LITTNLWRQSSLLKNFLKLITFSFWKNVPQ 52
           +I T L R SSLL NFLK+ TF  WKNVPQ
Sbjct: 237 VIMTPLMRHSSLLMNFLKMFTFYIWKNVPQ 266


>emb|CAB85991.1| putative protein [Arabidopsis thaliana]
          Length = 350

 Score =  214 bits (544), Expect = 2e-53
 Identities = 122/248 (49%), Positives = 155/248 (62%), Gaps = 3/248 (1%)
 Frame = -3

Query: 786 SIMSIETFVDNFNALDLPLNILRVFFSPPLLTF*TVRSIVSSSTEWTEFNSFSEKCTNHF 607
           SI SI+ FV  F+AL LPLN+L   FS  L+                +F +F+       
Sbjct: 95  SIKSIKAFVREFHALHLPLNLLMYTFSLSLI----------------QFKAFAP------ 132

Query: 606 LTTVDRELPFFARRNRIQIPTS*CKDCQL**YLGLFFRNNAGVMFCPYQLSDDGVEMQFA 427
                   PF A                          NNAGVMFCPYQLS+DG+E+QFA
Sbjct: 133 --------PFLA--------------------------NNAGVMFCPYQLSEDGIELQFA 158

Query: 426 TNHLGHFYLTSLLLDKMKNTAQVTGLEGRIVNLSSVAHTLAYKEGIRFENLNDI---R*K 256
           TNH+GHF LT+LLLD MKNTA+ +G+EGRI+N+SSVAH   Y+EGI+F+++NDI     K
Sbjct: 159 TNHIGHFLLTNLLLDTMKNTAKTSGVEGRILNVSSVAHIYTYQEGIQFDSINDICSYSDK 218

Query: 255 KAYGHSELANILHANELSRRLKK*EEGANITVNSLHPGLITTNLWRQSSLLKNFLKLITF 76
           +AYG S+LANILHANELSR+L+  EEG NIT NS+HPGLI TNL++ ++LL  FLK  +F
Sbjct: 219 RAYGQSKLANILHANELSRQLQ--EEGVNITANSVHPGLILTNLFQHTALLMRFLKFFSF 276

Query: 75  SFWKNVPQ 52
             WKN+PQ
Sbjct: 277 YLWKNIPQ 284


>ref|XP_003542461.1| PREDICTED: retinol dehydrogenase 12-like isoform 1 [Glycine max]
          Length = 323

 Score =  211 bits (538), Expect = 1e-52
 Identities = 105/150 (70%), Positives = 121/150 (80%), Gaps = 3/150 (2%)
 Frame = -3

Query: 492 NNAGVMFCPYQLSDDGVEMQFATNHLGHFYLTSLLLDKMKNTAQVTGLEGRIVNLSSVAH 313
           NNAGVMFCPYQ ++DG+EMQFATNHLGHF LT LLLDKMK TA+ TG+EGRI+NLSS+AH
Sbjct: 119 NNAGVMFCPYQQTEDGIEMQFATNHLGHFLLTKLLLDKMKQTAKDTGIEGRIINLSSIAH 178

Query: 312 TLAYKEGIRFENLND---IR*KKAYGHSELANILHANELSRRLKK*EEGANITVNSLHPG 142
              Y+EGIRF+N+ND      KKAYG S+LANILH NELSRRL+   EG NIT NS+HPG
Sbjct: 179 VYTYEEGIRFDNINDEDGYSDKKAYGQSKLANILHTNELSRRLQ--AEGVNITANSVHPG 236

Query: 141 LITTNLWRQSSLLKNFLKLITFSFWKNVPQ 52
           +I T L R SSLL NFLK+ TF  WKN+PQ
Sbjct: 237 VIMTPLMRHSSLLMNFLKMFTFFAWKNIPQ 266


>ref|XP_002309049.1| predicted protein [Populus trichocarpa] gi|222855025|gb|EEE92572.1|
           predicted protein [Populus trichocarpa]
          Length = 322

 Score =  208 bits (530), Expect = 9e-52
 Identities = 103/150 (68%), Positives = 122/150 (81%), Gaps = 3/150 (2%)
 Frame = -3

Query: 492 NNAGVMFCPYQLSDDGVEMQFATNHLGHFYLTSLLLDKMKNTAQVTGLEGRIVNLSSVAH 313
           NNAG+MFCPYQLS+DG+EMQFATNHLGHF LT+LLLDKMK TA+ TG+EGRIVNLSSVAH
Sbjct: 118 NNAGIMFCPYQLSEDGIEMQFATNHLGHFLLTNLLLDKMKETARTTGVEGRIVNLSSVAH 177

Query: 312 TLAYKEGIRFENLNDIR---*KKAYGHSELANILHANELSRRLKK*EEGANITVNSLHPG 142
              YK+GIRF N+ND +    K+AYG S+LANILHA ELSRR +  EEG NIT N++HPG
Sbjct: 178 IHTYKDGIRFNNINDKKRYSDKRAYGQSKLANILHAKELSRRFQ--EEGVNITANAVHPG 235

Query: 141 LITTNLWRQSSLLKNFLKLITFSFWKNVPQ 52
           LI TNL++ S++L   LK  +F  WKNVPQ
Sbjct: 236 LIMTNLFKHSAILMRTLKFFSFFLWKNVPQ 265


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