BLASTX nr result

ID: Cimicifuga21_contig00008549 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00008549
         (1627 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002275197.2| PREDICTED: protein OSB2, chloroplastic [Viti...   338   3e-90
emb|CBI17930.3| unnamed protein product [Vitis vinifera]              336   1e-89
ref|XP_002306816.1| predicted protein [Populus trichocarpa] gi|2...   309   1e-81
ref|XP_002302076.1| predicted protein [Populus trichocarpa] gi|2...   306   8e-81
ref|XP_004146958.1| PREDICTED: protein OSB2, chloroplastic-like ...   305   3e-80

>ref|XP_002275197.2| PREDICTED: protein OSB2, chloroplastic [Vitis vinifera]
          Length = 292

 Score =  338 bits (866), Expect = 3e-90
 Identities = 167/267 (62%), Positives = 201/267 (75%)
 Frame = -3

Query: 1382 SINSYYNNANHVNGDGDFSQQEEQLAYPRPSEIPWNKELCNSVHLIGVVGTPVQVKHLNS 1203
            SI   YNN +H           + ++YPRPSE+PW KELCNSV LIG+VG PV++KHL+S
Sbjct: 49   SIICNYNNDHH----------NQAVSYPRPSEVPWKKELCNSVSLIGIVGAPVEIKHLSS 98

Query: 1202 GKVLAWTRLAVRKSATETTWINLTFWNELAHVASQHVEKGQRIYVSGRLVSDTVEGEYEK 1023
            GKVLAWTRLAVRKSA++TTWINLTFW+ELAHVASQHVEKGQ+IYVSGRLVSDTVE +  K
Sbjct: 99   GKVLAWTRLAVRKSASDTTWINLTFWDELAHVASQHVEKGQQIYVSGRLVSDTVENDEGK 158

Query: 1022 TQTYYKVVVQQLNFIEKSFPPGPLFEQERSSTTTAVPLYEQERSPTTTTGGRVGNYANKN 843
             QTYYKVVVQQLNF+E+SF        + S++  A          +T +G ++G+ A  +
Sbjct: 159  QQTYYKVVVQQLNFVERSFS-----SADESNSLAA--------GNSTFSGRKLGSPATNS 205

Query: 842  TGSTQELWQAFFANPVDWWDNRKNKRSLKYPDFKHKDTGESLWVDAKYNPPWVKSQLAIL 663
            TGS +ELWQAFFANPVDWWDNRK K++ KYPDFKHKDTGE+LWV+ +YNP WVKSQLAIL
Sbjct: 206  TGSIEELWQAFFANPVDWWDNRKTKKNPKYPDFKHKDTGEALWVEGRYNPSWVKSQLAIL 265

Query: 662  DSRMESFHANETSPSVSYMSSDDLTMF 582
            DSRMESF   +    V+ M+ DD   F
Sbjct: 266  DSRMESFRDQDARMHVNLMAGDDFMPF 292


>emb|CBI17930.3| unnamed protein product [Vitis vinifera]
          Length = 286

 Score =  336 bits (861), Expect = 1e-89
 Identities = 165/267 (61%), Positives = 196/267 (73%)
 Frame = -3

Query: 1382 SINSYYNNANHVNGDGDFSQQEEQLAYPRPSEIPWNKELCNSVHLIGVVGTPVQVKHLNS 1203
            SI   YNN +H           + ++YPRPSE+PW KELCNSV LIG+VG PV++KHL+S
Sbjct: 49   SIICNYNNDHH----------NQAVSYPRPSEVPWKKELCNSVSLIGIVGAPVEIKHLSS 98

Query: 1202 GKVLAWTRLAVRKSATETTWINLTFWNELAHVASQHVEKGQRIYVSGRLVSDTVEGEYEK 1023
            GKVLAWTRLAVRKSA++TTWINLTFW+ELAHVASQHVEKGQ+IYVSGRLVSDTVE +  K
Sbjct: 99   GKVLAWTRLAVRKSASDTTWINLTFWDELAHVASQHVEKGQQIYVSGRLVSDTVENDEGK 158

Query: 1022 TQTYYKVVVQQLNFIEKSFPPGPLFEQERSSTTTAVPLYEQERSPTTTTGGRVGNYANKN 843
             QTYYKVVVQQLNF+E+SF                      + S +   G ++G+ A  +
Sbjct: 159  QQTYYKVVVQQLNFVERSFS-------------------SADESNSLAAGRKLGSPATNS 199

Query: 842  TGSTQELWQAFFANPVDWWDNRKNKRSLKYPDFKHKDTGESLWVDAKYNPPWVKSQLAIL 663
            TGS +ELWQAFFANPVDWWDNRK K++ KYPDFKHKDTGE+LWV+ +YNP WVKSQLAIL
Sbjct: 200  TGSIEELWQAFFANPVDWWDNRKTKKNPKYPDFKHKDTGEALWVEGRYNPSWVKSQLAIL 259

Query: 662  DSRMESFHANETSPSVSYMSSDDLTMF 582
            DSRMESF   +    V+ M+ DD   F
Sbjct: 260  DSRMESFRDQDARMHVNLMAGDDFMPF 286


>ref|XP_002306816.1| predicted protein [Populus trichocarpa] gi|222856265|gb|EEE93812.1|
            predicted protein [Populus trichocarpa]
          Length = 292

 Score =  309 bits (792), Expect = 1e-81
 Identities = 150/264 (56%), Positives = 192/264 (72%)
 Frame = -3

Query: 1385 SSINSYYNNANHVNGDGDFSQQEEQLAYPRPSEIPWNKELCNSVHLIGVVGTPVQVKHLN 1206
            SS  S++  +   + D   +Q  + + + +P+EI WNKELCNSVHLIG+VGTPV++KHL 
Sbjct: 40   SSKRSHFQRSLKCSADYRDNQYSQAVTHAKPAEIQWNKELCNSVHLIGIVGTPVEIKHLP 99

Query: 1205 SGKVLAWTRLAVRKSATETTWINLTFWNELAHVASQHVEKGQRIYVSGRLVSDTVEGEYE 1026
            SGKV+AWTRLAV+KSA +T+WINLTFW++LA V+SQHVEKG +IYVSGRL++D+VE +  
Sbjct: 100  SGKVVAWTRLAVKKSANDTSWINLTFWDDLAQVSSQHVEKGHQIYVSGRLITDSVENDEG 159

Query: 1025 KTQTYYKVVVQQLNFIEKSFPPGPLFEQERSSTTTAVPLYEQERSPTTTTGGRVGNYANK 846
            K QTYYKVVVQQLNFIE+S   G               LY+ + +  T  G + GN    
Sbjct: 160  KLQTYYKVVVQQLNFIERSSSRG---------------LYDSDFN-NTAAGSKFGNNTAN 203

Query: 845  NTGSTQELWQAFFANPVDWWDNRKNKRSLKYPDFKHKDTGESLWVDAKYNPPWVKSQLAI 666
            + GS +E WQAFFANP++WWDNRK+KR+ KYPDFKHKDTGE+LWV+ +YNPPWVKSQLAI
Sbjct: 204  DMGSMEERWQAFFANPLEWWDNRKDKRNPKYPDFKHKDTGEALWVEGRYNPPWVKSQLAI 263

Query: 665  LDSRMESFHANETSPSVSYMSSDD 594
            LD +M S    ++    S MS DD
Sbjct: 264  LDGQMGSLQDQDSRLHESSMSGDD 287


>ref|XP_002302076.1| predicted protein [Populus trichocarpa] gi|222843802|gb|EEE81349.1|
            predicted protein [Populus trichocarpa]
          Length = 292

 Score =  306 bits (785), Expect = 8e-81
 Identities = 151/249 (60%), Positives = 186/249 (74%)
 Frame = -3

Query: 1340 DGDFSQQEEQLAYPRPSEIPWNKELCNSVHLIGVVGTPVQVKHLNSGKVLAWTRLAVRKS 1161
            D  +SQ    + + +P+EI WNKELCNSVHLIG+VG PV++KHL SGKV+AWTRLAV+KS
Sbjct: 58   DNHYSQT---VTHAKPAEIQWNKELCNSVHLIGIVGIPVEIKHLPSGKVVAWTRLAVKKS 114

Query: 1160 ATETTWINLTFWNELAHVASQHVEKGQRIYVSGRLVSDTVEGEYEKTQTYYKVVVQQLNF 981
            AT+T+WINLTFW+ELA V SQHVEKGQ+IYVSGRL+SD+VE +  K QTYYKVVVQQLNF
Sbjct: 115  ATDTSWINLTFWDELAQVVSQHVEKGQQIYVSGRLISDSVENDDGKLQTYYKVVVQQLNF 174

Query: 980  IEKSFPPGPLFEQERSSTTTAVPLYEQERSPTTTTGGRVGNYANKNTGSTQELWQAFFAN 801
            IE+S P G               LY++  +     G + GN    + GST+E WQAFFA+
Sbjct: 175  IERSSPTG---------------LYDRGFN-NMEAGRKFGNNTANDMGSTEERWQAFFAS 218

Query: 800  PVDWWDNRKNKRSLKYPDFKHKDTGESLWVDAKYNPPWVKSQLAILDSRMESFHANETSP 621
            P++WWDNRK+KR+ KYPDFKHKDTGE+LWV+ +YNP WVKSQLAILD RM S    ++  
Sbjct: 219  PLEWWDNRKDKRNPKYPDFKHKDTGEALWVEGRYNPSWVKSQLAILDERMGSLRDQDSKL 278

Query: 620  SVSYMSSDD 594
             +S MS DD
Sbjct: 279  RLSSMSGDD 287


>ref|XP_004146958.1| PREDICTED: protein OSB2, chloroplastic-like [Cucumis sativus]
            gi|449527159|ref|XP_004170580.1| PREDICTED: protein OSB2,
            chloroplastic-like [Cucumis sativus]
          Length = 294

 Score =  305 bits (780), Expect = 3e-80
 Identities = 158/279 (56%), Positives = 193/279 (69%), Gaps = 1/279 (0%)
 Frame = -3

Query: 1415 KRLRFHR-YPQSSINSYYNNANHVNGDGDFSQQEEQLAYPRPSEIPWNKELCNSVHLIGV 1239
            K LRF   +P+ S    Y N + V              YP+PS+IPW KEL NSV LIG 
Sbjct: 45   KHLRFPAPFPKCSAMENYTNYSAVT-------------YPKPSQIPWKKELSNSVTLIGT 91

Query: 1238 VGTPVQVKHLNSGKVLAWTRLAVRKSATETTWINLTFWNELAHVASQHVEKGQRIYVSGR 1059
            VG PV++KHL SGK +AWTRLAV KS+TET+WI LTFW+ELAH+ASQHV+KG +IYVSGR
Sbjct: 92   VGLPVELKHLPSGKDVAWTRLAVWKSSTETSWIGLTFWDELAHIASQHVQKGNQIYVSGR 151

Query: 1058 LVSDTVEGEYEKTQTYYKVVVQQLNFIEKSFPPGPLFEQERSSTTTAVPLYEQERSPTTT 879
            LV+D VE +  K QTYYKVVVQQLNFIE+S    P ++Q+ +S                 
Sbjct: 152  LVADLVEADDGKQQTYYKVVVQQLNFIERSNSTAPHYDQDSNS---------------IM 196

Query: 878  TGGRVGNYANKNTGSTQELWQAFFANPVDWWDNRKNKRSLKYPDFKHKDTGESLWVDAKY 699
             G + G+ A  NTGSTQELWQAFFANPVDWWDNRKNK++ KYPDFKHKDTGE+LWV+ +Y
Sbjct: 197  AGRKPGSGAVDNTGSTQELWQAFFANPVDWWDNRKNKKNPKYPDFKHKDTGEALWVEGRY 256

Query: 698  NPPWVKSQLAILDSRMESFHANETSPSVSYMSSDDLTMF 582
            NPPWVKSQLA+LD RM S    E +   ++++S D   +
Sbjct: 257  NPPWVKSQLALLDMRMGSLDDQE-AKMANFVTSFDFPSY 294


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