BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00008548
         (977 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002279095.1| PREDICTED: cleavage and polyadenylation spec...   278   1e-72
emb|CBI27869.3| unnamed protein product [Vitis vinifera]              278   1e-72
ref|XP_002514092.1| pre-mRNA cleavage factor im, 25kD subunit, p...   268   2e-69
ref|XP_004141062.1| PREDICTED: cleavage and polyadenylation spec...   259   7e-67
ref|XP_002308275.1| predicted protein [Populus trichocarpa] gi|2...   256   8e-66

>ref|XP_002279095.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
           5-like [Vitis vinifera]
          Length = 284

 Score =  278 bits (712), Expect = 1e-72
 Identities = 134/193 (69%), Positives = 155/193 (80%)
 Frame = -1

Query: 974 INIYPLRNYYFGSKPPLPIKDETLADCAQRMRANYAAYGLRTCVQAVLVVELSKHPHLLV 795
           ++IYPL  YYFGSK PL +K+ETLAD   RM++NY+ YG RTCV AV++VEL KHPHLL+
Sbjct: 91  LDIYPLSCYYFGSKDPLLLKEETLADRILRMKSNYSRYGSRTCVVAVILVELFKHPHLLL 150

Query: 794 FQVNNSFFKLPGGRLRPGESEIEGLKRKLSRKLIANENGNDTDWEVGECLGMWWRPDFET 615
            QV NSFFKLPGGRLRPGESEI GLKRKLSRKL  NE+G+ +DWEVGECLGMWWRPDFET
Sbjct: 151 LQVKNSFFKLPGGRLRPGESEINGLKRKLSRKLSVNEDGDGSDWEVGECLGMWWRPDFET 210

Query: 614 LMYPYLPSSSRKPKECTKLFLVKLPIQSRFIXXXXXXXXXXXLYEIHENDKTYGQIISGV 435
           L+YPYLP + + PKECTKLFLVKLP   +FI           L ++HENDKTYG II+GV
Sbjct: 211 LLYPYLPPNVKNPKECTKLFLVKLPPSRKFIVPKNLKLLAIPLCQLHENDKTYGPIIAGV 270

Query: 434 PLLLSKFSLNIIE 396
           P LLSKFS NII+
Sbjct: 271 PQLLSKFSFNIID 283


>emb|CBI27869.3| unnamed protein product [Vitis vinifera]
          Length = 291

 Score =  278 bits (712), Expect = 1e-72
 Identities = 134/193 (69%), Positives = 155/193 (80%)
 Frame = -1

Query: 974 INIYPLRNYYFGSKPPLPIKDETLADCAQRMRANYAAYGLRTCVQAVLVVELSKHPHLLV 795
           ++IYPL  YYFGSK PL +K+ETLAD   RM++NY+ YG RTCV AV++VEL KHPHLL+
Sbjct: 98  LDIYPLSCYYFGSKDPLLLKEETLADRILRMKSNYSRYGSRTCVVAVILVELFKHPHLLL 157

Query: 794 FQVNNSFFKLPGGRLRPGESEIEGLKRKLSRKLIANENGNDTDWEVGECLGMWWRPDFET 615
            QV NSFFKLPGGRLRPGESEI GLKRKLSRKL  NE+G+ +DWEVGECLGMWWRPDFET
Sbjct: 158 LQVKNSFFKLPGGRLRPGESEINGLKRKLSRKLSVNEDGDGSDWEVGECLGMWWRPDFET 217

Query: 614 LMYPYLPSSSRKPKECTKLFLVKLPIQSRFIXXXXXXXXXXXLYEIHENDKTYGQIISGV 435
           L+YPYLP + + PKECTKLFLVKLP   +FI           L ++HENDKTYG II+GV
Sbjct: 218 LLYPYLPPNVKNPKECTKLFLVKLPPSRKFIVPKNLKLLAIPLCQLHENDKTYGPIIAGV 277

Query: 434 PLLLSKFSLNIIE 396
           P LLSKFS NII+
Sbjct: 278 PQLLSKFSFNIID 290


>ref|XP_002514092.1| pre-mRNA cleavage factor im, 25kD subunit, putative [Ricinus
           communis] gi|223546548|gb|EEF48046.1| pre-mRNA cleavage
           factor im, 25kD subunit, putative [Ricinus communis]
          Length = 214

 Score =  268 bits (684), Expect = 2e-69
 Identities = 128/192 (66%), Positives = 151/192 (78%)
 Frame = -1

Query: 974 INIYPLRNYYFGSKPPLPIKDETLADCAQRMRANYAAYGLRTCVQAVLVVELSKHPHLLV 795
           ++IYPL  YYFGSK PLP +DETL D  QRM++NY A+GLRTCV+AV++VEL KHPHLL+
Sbjct: 23  LDIYPLSRYYFGSKDPLPFRDETLVDRVQRMKSNYLAHGLRTCVEAVILVELFKHPHLLL 82

Query: 794 FQVNNSFFKLPGGRLRPGESEIEGLKRKLSRKLIANENGNDTDWEVGECLGMWWRPDFET 615
            Q+ NS FKLPGGR+RPGES+I GLKRKLSRKL  + N + TDWEVGECLGMWWRPDFET
Sbjct: 83  LQIKNSIFKLPGGRIRPGESDIGGLKRKLSRKL--SNNQDQTDWEVGECLGMWWRPDFET 140

Query: 614 LMYPYLPSSSRKPKECTKLFLVKLPIQSRFIXXXXXXXXXXXLYEIHENDKTYGQIISGV 435
           L+YPYLP + + PKECTKLFLV+LP   +FI           L +IH+N KTYG IISGV
Sbjct: 141 LLYPYLPPNLKTPKECTKLFLVRLPTSCKFIVPKNLKLLAVPLSQIHDNHKTYGGIISGV 200

Query: 434 PLLLSKFSLNII 399
           P LLSK+S  II
Sbjct: 201 PQLLSKYSFRII 212


>ref|XP_004141062.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
           5-like [Cucumis sativus]
           gi|449488056|ref|XP_004157928.1| PREDICTED: cleavage and
           polyadenylation specificity factor subunit 5-like
           [Cucumis sativus]
          Length = 217

 Score =  259 bits (662), Expect = 7e-67
 Identities = 124/192 (64%), Positives = 150/192 (78%)
 Frame = -1

Query: 974 INIYPLRNYYFGSKPPLPIKDETLADCAQRMRANYAAYGLRTCVQAVLVVELSKHPHLLV 795
           I+IYPL NYYFGSK PL  KDETL+D   RM++NYAA+GLRTCV+AV++VEL KHPHLL+
Sbjct: 24  IDIYPLSNYYFGSKEPLLFKDETLSDRVLRMKSNYAAHGLRTCVEAVMLVELFKHPHLLL 83

Query: 794 FQVNNSFFKLPGGRLRPGESEIEGLKRKLSRKLIANENGNDTDWEVGECLGMWWRPDFET 615
           FQ+ NS FKLPGGR+RP ES+I+GL RKL++KL AN   + + WEV ECLGMWWRPDFET
Sbjct: 84  FQIRNSIFKLPGGRIRPNESDIDGLTRKLTKKLSANGASDASHWEVSECLGMWWRPDFET 143

Query: 614 LMYPYLPSSSRKPKECTKLFLVKLPIQSRFIXXXXXXXXXXXLYEIHENDKTYGQIISGV 435
           L++PYL ++ +  KECTKLFLVKLP   +F+           L +IHEN KTYG IISG+
Sbjct: 144 LLFPYLSTNVKGAKECTKLFLVKLPESRKFVVPKNLKLIAVPLCQIHENHKTYGPIISGI 203

Query: 434 PLLLSKFSLNII 399
           P LLSKFS NII
Sbjct: 204 PQLLSKFSFNII 215


>ref|XP_002308275.1| predicted protein [Populus trichocarpa] gi|222854251|gb|EEE91798.1|
           predicted protein [Populus trichocarpa]
          Length = 210

 Score =  256 bits (653), Expect = 8e-66
 Identities = 123/191 (64%), Positives = 149/191 (78%)
 Frame = -1

Query: 974 INIYPLRNYYFGSKPPLPIKDETLADCAQRMRANYAAYGLRTCVQAVLVVELSKHPHLLV 795
           I IYPL +YYFGSK P+  +DET+AD  QRM++N++A GLRT VQAV++VEL KHPHLL+
Sbjct: 19  IEIYPLGSYYFGSKDPIAFRDETIADRVQRMKSNFSARGLRTSVQAVMLVELFKHPHLLL 78

Query: 794 FQVNNSFFKLPGGRLRPGESEIEGLKRKLSRKLIANENGNDTDWEVGECLGMWWRPDFET 615
            QV N+FFKLPGGRLRPGES+I+GL+RKLSR L  NE+  D  WEVG+CLGMWWR DFET
Sbjct: 79  LQVRNAFFKLPGGRLRPGESDIDGLQRKLSRMLSVNEDETD-HWEVGDCLGMWWRSDFET 137

Query: 614 LMYPYLPSSSRKPKECTKLFLVKLPIQSRFIXXXXXXXXXXXLYEIHENDKTYGQIISGV 435
           L+YPYLP + + PKECTKL++VKLP   +FI           L ++HEN KTYG +ISGV
Sbjct: 138 LLYPYLPPNLKVPKECTKLYVVKLPASRKFIVPKNLKLLAVPLCQVHENHKTYGPVISGV 197

Query: 434 PLLLSKFSLNI 402
           P LLSKFS NI
Sbjct: 198 PQLLSKFSFNI 208