BLASTX nr result

ID: Cimicifuga21_contig00008539 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00008539
         (438 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN70693.1| hypothetical protein VITISV_041975 [Vitis vinifera]    44   2e-06
emb|CAN69200.1| hypothetical protein VITISV_023036 [Vitis vinifera]    45   5e-06
emb|CAN68820.1| hypothetical protein VITISV_009132 [Vitis vinifera]    40   1e-05
emb|CAN70431.1| hypothetical protein VITISV_030910 [Vitis vinifera]    41   1e-05

>emb|CAN70693.1| hypothetical protein VITISV_041975 [Vitis vinifera]
          Length = 1795

 Score = 44.3 bits (103), Expect(3) = 2e-06
 Identities = 19/41 (46%), Positives = 30/41 (73%)
 Frame = +2

Query: 2    PLLFSLVANVIGRMISKANKKGFLRGWKVGCDEVLISHLQF 124
            P LF+LVA+V+ RM+ +A ++  L G++VG +   +SHLQF
Sbjct: 1292 PFLFTLVADVLSRMLLRAEERNSLEGFRVGRNSTRVSHLQF 1332



 Score = 30.0 bits (66), Expect(3) = 2e-06
 Identities = 24/84 (28%), Positives = 37/84 (44%), Gaps = 1/84 (1%)
 Frame = +3

Query: 123  FADDTVVFLGDKVAHM**LRGILG*FETASGIQVNLPKSKVIQLVMWSTPVAWPRHWDVL 302
            FADDT+ F       +  L+ +L  F   SG++VNL KS +  + +         H   L
Sbjct: 1332 FADDTIFFSNTSEEDLQTLKSLLLVFGHISGLKVNLDKSNIYGINLEQ------NHLSRL 1385

Query: 303  LTPSQRRSWDWVSPW-ALPIGRYP 371
                  ++  W  P+  LP+G  P
Sbjct: 1386 AELLDCKASGWPMPYLGLPLGGNP 1409



 Score = 20.8 bits (42), Expect(3) = 2e-06
 Identities = 9/18 (50%), Positives = 12/18 (66%)
 Frame = +1

Query: 382  VIELFSRKLACWKGKYLT 435
            VIE  SR+L  W+  YL+
Sbjct: 1418 VIERISRRLDGWQKAYLS 1435


>emb|CAN69200.1| hypothetical protein VITISV_023036 [Vitis vinifera]
          Length = 1215

 Score = 45.1 bits (105), Expect(2) = 5e-06
 Identities = 20/41 (48%), Positives = 31/41 (75%)
 Frame = +2

Query: 2    PLLFSLVANVIGRMISKANKKGFLRGWKVGCDEVLISHLQF 124
            PLLF+LVA+V+ RM+ +A ++  L G++VG +   +SHLQF
Sbjct: 1093 PLLFTLVADVLSRMLLRAXERNSLXGFRVGRNNTRVSHLQF 1133



 Score = 30.0 bits (66), Expect(2) = 5e-06
 Identities = 16/41 (39%), Positives = 23/41 (56%)
 Frame = +3

Query: 123  FADDTVVFLGDKVAHM**LRGILG*FETASGIQVNLPKSKV 245
            FADDT+ F       +  L+ +L  F   SG++VNL KS +
Sbjct: 1133 FADDTIFFSNTSEEDLQTLKSLLLVFXHISGLKVNLDKSNI 1173


>emb|CAN68820.1| hypothetical protein VITISV_009132 [Vitis vinifera]
          Length = 1910

 Score = 40.0 bits (92), Expect(2) = 1e-05
 Identities = 18/41 (43%), Positives = 27/41 (65%)
 Frame = +2

Query: 2    PLLFSLVANVIGRMISKANKKGFLRGWKVGCDEVLISHLQF 124
            P LF+LVA+V+ R++ +A + G   G+ VG D   +S LQF
Sbjct: 1362 PFLFTLVADVLSRLLFRAEETGLTEGFSVGRDRTRVSLLQF 1402



 Score = 33.9 bits (76), Expect(2) = 1e-05
 Identities = 17/41 (41%), Positives = 26/41 (63%)
 Frame = +3

Query: 123  FADDTVVFLGDKVAHM**LRGILG*FETASGIQVNLPKSKV 245
            FADDT++F    + H+  L+ IL  F   SG+++NL KS +
Sbjct: 1402 FADDTIIFSKASLEHLQNLKIILLVFGQVSGLKINLEKSTI 1442


>emb|CAN70431.1| hypothetical protein VITISV_030910 [Vitis vinifera]
          Length = 971

 Score = 41.2 bits (95), Expect(2) = 1e-05
 Identities = 19/41 (46%), Positives = 27/41 (65%)
 Frame = +2

Query: 2   PLLFSLVANVIGRMISKANKKGFLRGWKVGCDEVLISHLQF 124
           P LF+LVA+V+ RM+ +A + G   G+ VG D   +S LQF
Sbjct: 303 PFLFTLVADVLSRMLFRAEETGLTEGFSVGRDRTRVSLLQF 343



 Score = 32.7 bits (73), Expect(2) = 1e-05
 Identities = 17/41 (41%), Positives = 25/41 (60%)
 Frame = +3

Query: 123 FADDTVVFLGDKVAHM**LRGILG*FETASGIQVNLPKSKV 245
           FADDT+ F    + H+  L+ IL  F   SG+++NL KS +
Sbjct: 343 FADDTIFFSKASMEHLQNLKIILLVFXQVSGLKINLEKSTI 383


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