BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00008533
         (336 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002278304.1| PREDICTED: F-box protein SKIP23-like [Vitis ...    91   1e-16
ref|XP_002278342.1| PREDICTED: F-box protein SKIP23 [Vitis vinif...    87   1e-15
ref|XP_002510618.1| ubiquitin-protein ligase, putative [Ricinus ...    82   6e-14
emb|CAN69116.1| hypothetical protein VITISV_031843 [Vitis vinifera]    80   2e-13
ref|XP_002284795.1| PREDICTED: F-box protein SKIP23-like [Vitis ...    79   3e-13

>ref|XP_002278304.1| PREDICTED: F-box protein SKIP23-like [Vitis vinifera]
          Length = 394

 Score = 90.5 bits (223), Expect = 1e-16
 Identities = 52/110 (47%), Positives = 69/110 (62%), Gaps = 5/110 (4%)
 Frame = -3

Query: 316 DKSYLVESSGELLLVRRFRGEKINR----TVLFKVFHEDKISKRWVEVESLGGHAVFIGF 149
           DK  LVES+GELL+V  + G+ I+R     V FKVF  D+I   WVEVESLG   +F+G 
Sbjct: 240 DKKSLVESNGELLMVDTYFGQGIHRRMKRAVRFKVFKLDQIGHMWVEVESLGNRILFLGE 299

Query: 148 NHSLSLVASEFFGCRGDCIHFTDNCFLDPTIRGTEPHD-VGIFNLADGRI 2
             + S VASEF GC G+CI++T N F  P  +G   +  + IFNL +G +
Sbjct: 300 KSTFSAVASEFCGCEGNCIYYT-NTFFCPNGQGDNAYTAIDIFNLENGNM 348


>ref|XP_002278342.1| PREDICTED: F-box protein SKIP23 [Vitis vinifera]
          Length = 375

 Score = 87.0 bits (214), Expect = 1e-15
 Identities = 47/109 (43%), Positives = 66/109 (60%), Gaps = 4/109 (3%)
 Frame = -3

Query: 316 DKSYLVESSGELLLVRRFRGEKI----NRTVLFKVFHEDKISKRWVEVESLGGHAVFIGF 149
           +K  LVES+GELL+V  +  + I    NR V FKVF  ++I   WVEVE+LG   +F+G 
Sbjct: 239 NKKSLVESNGELLMVNTYFDQGIHGIMNRAVRFKVFKLNQIGHMWVEVENLGDRILFLGE 298

Query: 148 NHSLSLVASEFFGCRGDCIHFTDNCFLDPTIRGTEPHDVGIFNLADGRI 2
             + S VASEF GC G+CI++T++ F            +GIFNL +G +
Sbjct: 299 KSTFSAVASEFCGCEGNCIYYTNSFFFPNDQEDDAYTGIGIFNLENGNL 347


>ref|XP_002510618.1| ubiquitin-protein ligase, putative [Ricinus communis]
           gi|223551319|gb|EEF52805.1| ubiquitin-protein ligase,
           putative [Ricinus communis]
          Length = 398

 Score = 81.6 bits (200), Expect = 6e-14
 Identities = 50/118 (42%), Positives = 66/118 (55%), Gaps = 13/118 (11%)
 Frame = -3

Query: 316 DKSYLVESSGELLLVRRF------------RGEKINRTVLFKVFHEDKISKRWVEVESLG 173
           D  YLV S  ELLLV R+                I RT+ F+VF  D    +W+ + +LG
Sbjct: 255 DMQYLVNSGDELLLVTRYLDLEYEFDHPDMEPHLIYRTIRFEVFRLDWNGPQWLRMSTLG 314

Query: 172 GHAVFIGFNHSLSLVASEFFGCRGDCIHFTDNCFLDPTIRG-TEPHDVGIFNLADGRI 2
             A+FIG N SLSL A++F GC G+CI++TD+ +LD    G    HD+GIF L D  I
Sbjct: 315 DKALFIGENSSLSLSATDFSGCMGNCIYYTDD-YLDANYDGHFGDHDLGIFKLCDETI 371


>emb|CAN69116.1| hypothetical protein VITISV_031843 [Vitis vinifera]
          Length = 389

 Score = 80.1 bits (196), Expect = 2e-13
 Identities = 50/115 (43%), Positives = 64/115 (55%), Gaps = 10/115 (8%)
 Frame = -3

Query: 316 DKSYLVESSGELLLVRRF----------RGEKINRTVLFKVFHEDKISKRWVEVESLGGH 167
           D  YLVES  ELLLV R+          +   I RT  F+V   D  + RW  V SLG  
Sbjct: 252 DLQYLVESGEELLLVTRYLDLTYDVEXDQTSLIYRTTRFQVCRLDSKAPRWEVVSSLGDR 311

Query: 166 AVFIGFNHSLSLVASEFFGCRGDCIHFTDNCFLDPTIRGTEPHDVGIFNLADGRI 2
           A+F+G N SLSL + +F GC+G+CI++TD+   D         D+GIFNL DG I
Sbjct: 312 ALFLGENLSLSLSSVDFPGCKGNCIYYTDDYSEDNYDGIGGEQDLGIFNLEDGSI 366


>ref|XP_002284795.1| PREDICTED: F-box protein SKIP23-like [Vitis vinifera]
          Length = 389

 Score = 79.3 bits (194), Expect = 3e-13
 Identities = 50/115 (43%), Positives = 64/115 (55%), Gaps = 10/115 (8%)
 Frame = -3

Query: 316 DKSYLVESSGELLLVRRF----------RGEKINRTVLFKVFHEDKISKRWVEVESLGGH 167
           D  YLVES  ELLLV R+          +   I RT  F+V   D  + RW  V SLG  
Sbjct: 252 DLQYLVESGEELLLVTRYLDLTYDVEPDQTSLIYRTTRFQVCRLDLKAPRWEVVSSLGDR 311

Query: 166 AVFIGFNHSLSLVASEFFGCRGDCIHFTDNCFLDPTIRGTEPHDVGIFNLADGRI 2
           A+F+G N SLSL + +F GC+G+CI++TD+   D         D+GIFNL DG I
Sbjct: 312 ALFLGENLSLSLSSVDFPGCKGNCIYYTDDYSEDNYDGIGGEQDLGIFNLEDGSI 366