BLASTX nr result

ID: Cimicifuga21_contig00008522 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00008522
         (602 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002512728.1| ATP-binding cassette transporter, putative [...   129   5e-28
ref|NP_001057850.1| Os06g0554800 [Oryza sativa Japonica Group] g...   128   9e-28
sp|Q5Z9S8.1|PDR12_ORYSJ RecName: Full=Pleiotropic drug resistanc...   128   9e-28
emb|CAD59565.1| PDR-like ABC transporter [Oryza sativa Japonica ...   128   9e-28
gb|AFW76517.1| hypothetical protein ZEAMMB73_082078 [Zea mays]        128   9e-28

>ref|XP_002512728.1| ATP-binding cassette transporter, putative [Ricinus communis]
            gi|223547739|gb|EEF49231.1| ATP-binding cassette
            transporter, putative [Ricinus communis]
          Length = 1429

 Score =  129 bits (323), Expect = 5e-28
 Identities = 77/136 (56%), Positives = 94/136 (69%), Gaps = 18/136 (13%)
 Frame = -2

Query: 601  ALVGVPGITRLSTEQRKHLTIAVELVANPSTIFMDELTSGLNAQAAAIVM*TVRNTVDTG 422
            ALVG+PG++ LSTEQRK LTIAVELVANPS IFMDE TSGL+A+AAAIVM TVRNTVDTG
Sbjct: 974  ALVGLPGVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTG 1033

Query: 421  RTVVCTIHQPSIDIFS------LLTRSESTLHV------ATSLVKL------SPDAPPGF 296
            RTVVCTIHQPSIDIF       L+ R    ++V      +  L+K        PD   G+
Sbjct: 1034 RTVVCTIHQPSIDIFEAFDELLLMKRGGQEIYVGPLGRHSCQLIKYFEAIEGVPDIKDGY 1093

Query: 295  YKSTILSERDSSSKDI 248
              +T + E  SS++++
Sbjct: 1094 NPATWMLEVSSSAQEM 1109


>ref|NP_001057850.1| Os06g0554800 [Oryza sativa Japonica Group]
           gi|53792557|dbj|BAD53546.1| putative PDR-like ABC
           transporter [Oryza sativa Japonica Group]
           gi|113595890|dbj|BAF19764.1| Os06g0554800 [Oryza sativa
           Japonica Group] gi|215768125|dbj|BAH00354.1| unnamed
           protein product [Oryza sativa Japonica Group]
          Length = 1167

 Score =  128 bits (321), Expect = 9e-28
 Identities = 67/75 (89%), Positives = 70/75 (93%)
 Frame = -2

Query: 601 ALVGVPGITRLSTEQRKHLTIAVELVANPSTIFMDELTSGLNAQAAAIVM*TVRNTVDTG 422
           ALVG+PGIT LSTEQRK LTIAVELVANPS IFMDE TSGL+A+AAAIVM TVRNTVDTG
Sbjct: 708 ALVGLPGITGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTG 767

Query: 421 RTVVCTIHQPSIDIF 377
           RTVVCTIHQPSIDIF
Sbjct: 768 RTVVCTIHQPSIDIF 782


>sp|Q5Z9S8.1|PDR12_ORYSJ RecName: Full=Pleiotropic drug resistance protein 12
            gi|53792556|dbj|BAD53545.1| PDR-like ABC transporter
            [Oryza sativa Japonica Group] gi|222635742|gb|EEE65874.1|
            hypothetical protein OsJ_21675 [Oryza sativa Japonica
            Group]
          Length = 1500

 Score =  128 bits (321), Expect = 9e-28
 Identities = 67/75 (89%), Positives = 70/75 (93%)
 Frame = -2

Query: 601  ALVGVPGITRLSTEQRKHLTIAVELVANPSTIFMDELTSGLNAQAAAIVM*TVRNTVDTG 422
            ALVG+PGIT LSTEQRK LTIAVELVANPS IFMDE TSGL+A+AAAIVM TVRNTVDTG
Sbjct: 1041 ALVGLPGITGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTG 1100

Query: 421  RTVVCTIHQPSIDIF 377
            RTVVCTIHQPSIDIF
Sbjct: 1101 RTVVCTIHQPSIDIF 1115


>emb|CAD59565.1| PDR-like ABC transporter [Oryza sativa Japonica Group]
          Length = 1500

 Score =  128 bits (321), Expect = 9e-28
 Identities = 67/75 (89%), Positives = 70/75 (93%)
 Frame = -2

Query: 601  ALVGVPGITRLSTEQRKHLTIAVELVANPSTIFMDELTSGLNAQAAAIVM*TVRNTVDTG 422
            ALVG+PGIT LSTEQRK LTIAVELVANPS IFMDE TSGL+A+AAAIVM TVRNTVDTG
Sbjct: 1041 ALVGLPGITGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTG 1100

Query: 421  RTVVCTIHQPSIDIF 377
            RTVVCTIHQPSIDIF
Sbjct: 1101 RTVVCTIHQPSIDIF 1115


>gb|AFW76517.1| hypothetical protein ZEAMMB73_082078 [Zea mays]
          Length = 483

 Score =  128 bits (321), Expect = 9e-28
 Identities = 67/75 (89%), Positives = 70/75 (93%)
 Frame = -2

Query: 601 ALVGVPGITRLSTEQRKHLTIAVELVANPSTIFMDELTSGLNAQAAAIVM*TVRNTVDTG 422
           ALVG+PGIT LSTEQRK LTIAVELVANPS IFMDE TSGL+A+AAAIVM TVRNTVDTG
Sbjct: 24  ALVGLPGITGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTG 83

Query: 421 RTVVCTIHQPSIDIF 377
           RTVVCTIHQPSIDIF
Sbjct: 84  RTVVCTIHQPSIDIF 98


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