BLASTX nr result

ID: Cimicifuga21_contig00008501 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00008501
         (338 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

dbj|BAJ40864.1| tetrahydroberberine oxidase [Coptis japonica]          94   9e-18
ref|XP_002268682.2| PREDICTED: reticuline oxidase-like protein-l...    92   6e-17
emb|CBI31067.3| unnamed protein product [Vitis vinifera]               92   6e-17
emb|CAN72775.1| hypothetical protein VITISV_004087 [Vitis vinifera]    92   6e-17
gb|ADY15026.1| (S)-tetrahydroprotoberberine oxidase [Berberis wi...    90   2e-16

>dbj|BAJ40864.1| tetrahydroberberine oxidase [Coptis japonica]
          Length = 540

 Score = 94.4 bits (233), Expect = 9e-18
 Identities = 42/53 (79%), Positives = 48/53 (90%)
 Frame = -3

Query: 336 RDIDLGHSKNGTATYSEAKVWGSKYFKDNFDRLVKVKSEVDPDNFFRNEQSIP 178
           +D DLGH KNGTATY EAKVWGSKY+K+NFDRLV VK++VDPD+FF NEQSIP
Sbjct: 478 KDNDLGHKKNGTATYLEAKVWGSKYYKNNFDRLVSVKTKVDPDDFFTNEQSIP 530


>ref|XP_002268682.2| PREDICTED: reticuline oxidase-like protein-like [Vitis vinifera]
          Length = 575

 Score = 91.7 bits (226), Expect = 6e-17
 Identities = 41/57 (71%), Positives = 48/57 (84%)
 Frame = -3

Query: 336 RDIDLGHSKNGTATYSEAKVWGSKYFKDNFDRLVKVKSEVDPDNFFRNEQSIPTWKN 166
           RDIDLG ++NG  +Y EA +WG+KYFKDNFDRLV+VKS VDPDNFFR EQSIP+  N
Sbjct: 512 RDIDLGVNQNGNVSYEEASIWGTKYFKDNFDRLVQVKSRVDPDNFFRYEQSIPSVTN 568


>emb|CBI31067.3| unnamed protein product [Vitis vinifera]
          Length = 547

 Score = 91.7 bits (226), Expect = 6e-17
 Identities = 41/57 (71%), Positives = 48/57 (84%)
 Frame = -3

Query: 336 RDIDLGHSKNGTATYSEAKVWGSKYFKDNFDRLVKVKSEVDPDNFFRNEQSIPTWKN 166
           RDIDLG ++NG  +Y EA +WG+KYFKDNFDRLV+VKS VDPDNFFR EQSIP+  N
Sbjct: 454 RDIDLGVNQNGNVSYEEASIWGTKYFKDNFDRLVQVKSRVDPDNFFRYEQSIPSVTN 510


>emb|CAN72775.1| hypothetical protein VITISV_004087 [Vitis vinifera]
          Length = 509

 Score = 91.7 bits (226), Expect = 6e-17
 Identities = 41/57 (71%), Positives = 48/57 (84%)
 Frame = -3

Query: 336 RDIDLGHSKNGTATYSEAKVWGSKYFKDNFDRLVKVKSEVDPDNFFRNEQSIPTWKN 166
           RDIDLG ++NG  +Y EA +WG+KYFKDNFDRLV+VKS VDPDNFFR EQSIP+  N
Sbjct: 446 RDIDLGVNQNGNVSYEEASIWGTKYFKDNFDRLVQVKSRVDPDNFFRYEQSIPSVTN 502


>gb|ADY15026.1| (S)-tetrahydroprotoberberine oxidase [Berberis wilsonae]
          Length = 530

 Score = 89.7 bits (221), Expect = 2e-16
 Identities = 39/57 (68%), Positives = 50/57 (87%)
 Frame = -3

Query: 336 RDIDLGHSKNGTATYSEAKVWGSKYFKDNFDRLVKVKSEVDPDNFFRNEQSIPTWKN 166
           +DIDLG +KNGTATYS+AK WGSKYFK+NF RL++VK++VDP+NFF NEQ IP + +
Sbjct: 474 KDIDLGQTKNGTATYSQAKAWGSKYFKNNFKRLMQVKTKVDPNNFFCNEQGIPPFSS 530


Top