BLASTX nr result

ID: Cimicifuga21_contig00008496 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00008496
         (358 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002283723.1| PREDICTED: probable calcium-binding protein ...    83   3e-14
ref|NP_568568.1| putative calcium-binding protein CML45 [Arabido...    72   4e-11
dbj|BAB08899.1| unnamed protein product [Arabidopsis thaliana]         72   4e-11
ref|XP_002870769.1| calcium-binding EF hand family protein [Arab...    72   6e-11
ref|XP_002323865.1| predicted protein [Populus trichocarpa] gi|2...    64   1e-08

>ref|XP_002283723.1| PREDICTED: probable calcium-binding protein CML45 [Vitis vinifera]
           gi|296082935|emb|CBI22236.3| unnamed protein product
           [Vitis vinifera]
          Length = 198

 Score = 82.8 bits (203), Expect = 3e-14
 Identities = 49/121 (40%), Positives = 70/121 (57%), Gaps = 7/121 (5%)
 Frame = -1

Query: 343 FSLAGFIGFLLFDGLIKWITGVEKFYSSSRCFFQSQ-------KVWSVMKIADSKSLKHK 185
           FS +     L F+ +  W+T ++ F+S S  FFQSQ       ++W+  K  D +     
Sbjct: 14  FSSSILDDILRFEVICLWVTIIQGFFSRSMSFFQSQFSFFCNTELWAERKSQDFEVPSRP 73

Query: 184 VSLNEKVEDGKLSREDVEMVMGNLKIVWNHDKEIIHEKLGSNELSVLFEDKEPSIEEVKE 5
           +S N KV+D  L RED+E VM  L I  N + E + E+L   EL+ LFE+KEPS+EE+KE
Sbjct: 74  LSQNVKVDDRSLCREDMETVMERLGICCNPEGEKLQERLRPEELAGLFEEKEPSLEELKE 133

Query: 4   A 2
           A
Sbjct: 134 A 134


>ref|NP_568568.1| putative calcium-binding protein CML45 [Arabidopsis thaliana]
           gi|75331780|sp|Q93Z27.1|CML45_ARATH RecName:
           Full=Probable calcium-binding protein CML45; AltName:
           Full=Calmodulin-like protein 45
           gi|16648830|gb|AAL25605.1| AT5g39670/MIJ24_140
           [Arabidopsis thaliana] gi|20466131|gb|AAM19987.1|
           AT5g39670/MIJ24_140 [Arabidopsis thaliana]
           gi|332007079|gb|AED94462.1| putative calcium-binding
           protein CML45 [Arabidopsis thaliana]
          Length = 204

 Score = 72.4 bits (176), Expect = 4e-11
 Identities = 47/120 (39%), Positives = 70/120 (58%), Gaps = 3/120 (2%)
 Frame = -1

Query: 352 SLSFSLAGFIGFLLFDGLIKWITGVEKFYSSSRCFFQSQKVWSVMKIADSK---SLKHKV 182
           SLSF L G I F L  G  +W++  + F+S      Q Q+  S  K  D +   S+KH+ 
Sbjct: 24  SLSFPLFGLINFFLI-GFFRWVSFAQLFFSRFWPLVQHQQCVSEKKSKDLEFQTSIKHEE 82

Query: 181 SLNEKVEDGKLSREDVEMVMGNLKIVWNHDKEIIHEKLGSNELSVLFEDKEPSIEEVKEA 2
             ++  +D  L REDV MVM +L +  + + E + ++  S E+S LFE+KEPS+EEVK+A
Sbjct: 83  YRDD--DDDGLCREDVGMVMKSLGLSTDQENEGLQKQYSSKEVSNLFEEKEPSLEEVKQA 140


>dbj|BAB08899.1| unnamed protein product [Arabidopsis thaliana]
          Length = 193

 Score = 72.4 bits (176), Expect = 4e-11
 Identities = 47/120 (39%), Positives = 70/120 (58%), Gaps = 3/120 (2%)
 Frame = -1

Query: 352 SLSFSLAGFIGFLLFDGLIKWITGVEKFYSSSRCFFQSQKVWSVMKIADSK---SLKHKV 182
           SLSF L G I F L  G  +W++  + F+S      Q Q+  S  K  D +   S+KH+ 
Sbjct: 13  SLSFPLFGLINFFLI-GFFRWVSFAQLFFSRFWPLVQHQQCVSEKKSKDLEFQTSIKHEE 71

Query: 181 SLNEKVEDGKLSREDVEMVMGNLKIVWNHDKEIIHEKLGSNELSVLFEDKEPSIEEVKEA 2
             ++  +D  L REDV MVM +L +  + + E + ++  S E+S LFE+KEPS+EEVK+A
Sbjct: 72  YRDD--DDDGLCREDVGMVMKSLGLSTDQENEGLQKQYSSKEVSNLFEEKEPSLEEVKQA 129


>ref|XP_002870769.1| calcium-binding EF hand family protein [Arabidopsis lyrata subsp.
           lyrata] gi|297316605|gb|EFH47028.1| calcium-binding EF
           hand family protein [Arabidopsis lyrata subsp. lyrata]
          Length = 203

 Score = 71.6 bits (174), Expect = 6e-11
 Identities = 48/120 (40%), Positives = 68/120 (56%), Gaps = 3/120 (2%)
 Frame = -1

Query: 352 SLSFSLAGFIGFLLFDGLIKWITGVEKFYSSSRCFFQSQKVWSVMKIADSK---SLKHKV 182
           S SF L G I F L  G  +W++  + F+S      Q Q+  S  K  D +   S+KH+ 
Sbjct: 25  SFSFPLFGLINFFLI-GFFRWVSFAQSFFSRFWPLVQHQQCVSEKKSKDLEFQTSIKHE- 82

Query: 181 SLNEKVEDGKLSREDVEMVMGNLKIVWNHDKEIIHEKLGSNELSVLFEDKEPSIEEVKEA 2
              E  +D  L REDV MVM +L +  + + E + ++  S ELS LFE+KEPS+EEVK+A
Sbjct: 83  ---EYRDDDGLCREDVGMVMKSLGLSTDKECEGLQKQYSSEELSNLFEEKEPSLEEVKQA 139


>ref|XP_002323865.1| predicted protein [Populus trichocarpa] gi|222866867|gb|EEF03998.1|
           predicted protein [Populus trichocarpa]
          Length = 212

 Score = 63.9 bits (154), Expect = 1e-08
 Identities = 43/130 (33%), Positives = 71/130 (54%), Gaps = 11/130 (8%)
 Frame = -1

Query: 358 NLSLSFS-LAGFIGFLLFDGLIKWITGVEKFYSSSRCFFQSQKVWSVMKIAD-------- 206
           N + SFS L   +  +L + +    + ++KF +    F QSQ      ++ +        
Sbjct: 19  NANQSFSPLFTMVHLVLSELIFSRFSNLQKFLARFWFFLQSQLGLGNSELWEDDDGNQDS 78

Query: 205 --SKSLKHKVSLNEKVEDGKLSREDVEMVMGNLKIVWNHDKEIIHEKLGSNELSVLFEDK 32
             SK  +     N++ ++  + REDVEMVM NL +  + + E + E +GS+E+S LF++K
Sbjct: 79  ELSKQTQESCFDNKRPDERSICREDVEMVMENLGLFCSSESEELKEWMGSDEISQLFDEK 138

Query: 31  EPSIEEVKEA 2
           EPS+EEVKEA
Sbjct: 139 EPSLEEVKEA 148


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