BLASTX nr result

ID: Cimicifuga21_contig00008495 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00008495
         (592 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002283723.1| PREDICTED: probable calcium-binding protein ...   156   3e-36
ref|XP_002323865.1| predicted protein [Populus trichocarpa] gi|2...   153   2e-35
ref|XP_002305364.1| predicted protein [Populus trichocarpa] gi|2...   144   1e-32
ref|XP_003612498.1| Calcium-binding protein CML42 [Medicago trun...   135   7e-30
ref|XP_002531850.1| calcium ion binding protein, putative [Ricin...   135   7e-30

>ref|XP_002283723.1| PREDICTED: probable calcium-binding protein CML45 [Vitis vinifera]
           gi|296082935|emb|CBI22236.3| unnamed protein product
           [Vitis vinifera]
          Length = 198

 Score =  156 bits (394), Expect = 3e-36
 Identities = 86/175 (49%), Positives = 111/175 (63%), Gaps = 7/175 (4%)
 Frame = -3

Query: 539 LLLFDGVLKWVTGFMKFYSSSRCFLQSQTEVVIGKSKGWEERRITDSGTVKRKVSLNKKV 360
           +L F+ +  WVT    F+S S  F QSQ       ++ W ER+  D     R +S N KV
Sbjct: 22  ILRFEVICLWVTIIQGFFSRSMSFFQSQFSFFCN-TELWAERKSQDFEVPSRPLSQNVKV 80

Query: 359 EDGKLSREDMEMVMGH-------DEEILHQRLGSNEMSVLSEDKEPSVEEVKEAFDVFDE 201
           +D  L REDME VM         + E L +RL   E++ L E+KEPS+EE+KEAF VFD 
Sbjct: 81  DDRSLCREDMETVMERLGICCNPEGEKLQERLRPEELAGLFEEKEPSLEELKEAFLVFDA 140

Query: 200 NKDGFVDATELQRILCSLGFTEGAKVEECEKMIRAFDENGDGRIDINEFVKFMEN 36
           N+DGF+DA ELQR+L +LGF +G  +E+C+KMI + DEN DGRID NEFVKF EN
Sbjct: 141 NRDGFIDAKELQRVLLNLGFRQGTGIEDCKKMISSHDENRDGRIDFNEFVKFTEN 195


>ref|XP_002323865.1| predicted protein [Populus trichocarpa] gi|222866867|gb|EEF03998.1|
           predicted protein [Populus trichocarpa]
          Length = 212

 Score =  153 bits (386), Expect = 2e-35
 Identities = 87/187 (46%), Positives = 121/187 (64%), Gaps = 15/187 (8%)
 Frame = -3

Query: 545 IGLLLFDGVLKWVTGFMKFYSSSRCFLQSQTEVVIGKSKGWEERRITDSGTVKRKVSL-- 372
           + L+L + +    +   KF +    FLQSQ  + +G S+ WE+    D G    ++S   
Sbjct: 31  VHLVLSELIFSRFSNLQKFLARFWFFLQSQ--LGLGNSELWED----DDGNQDSELSKQT 84

Query: 371 ------NKKVEDGKLSREDMEMVMGH-------DEEILHQRLGSNEMSVLSEDKEPSVEE 231
                 NK+ ++  + RED+EMVM +       + E L + +GS+E+S L ++KEPS+EE
Sbjct: 85  QESCFDNKRPDERSICREDVEMVMENLGLFCSSESEELKEWMGSDEISQLFDEKEPSLEE 144

Query: 230 VKEAFDVFDENKDGFVDATELQRILCSLGFTEGAKVEECEKMIRAFDENGDGRIDINEFV 51
           VKEAF+VFD N+DGFVDA+ELQR+   LG  EG ++E+C K+IR FDENGDGRID NEFV
Sbjct: 145 VKEAFNVFDHNRDGFVDASELQRVFYKLGLKEGLQLEKCRKIIRTFDENGDGRIDFNEFV 204

Query: 50  KFMENSF 30
           KFMENSF
Sbjct: 205 KFMENSF 211


>ref|XP_002305364.1| predicted protein [Populus trichocarpa] gi|222848328|gb|EEE85875.1|
           predicted protein [Populus trichocarpa]
          Length = 210

 Score =  144 bits (363), Expect = 1e-32
 Identities = 77/182 (42%), Positives = 114/182 (62%), Gaps = 10/182 (5%)
 Frame = -3

Query: 545 IGLLLFDGVLKWVTGFMKFYSSSRCFLQSQTEVVIGKSKGWEE---RRITDSGTVKRKVS 375
           + L L   +      F K +S  R F+QSQ    +G S+ WE+    + +++    ++  
Sbjct: 30  VHLFLCKLIFSRFNNFQKLFSRFRFFIQSQLS--LGNSELWEDDDGNQDSETSMKSQESC 87

Query: 374 LNKKVEDGKLSREDMEMVM-------GHDEEILHQRLGSNEMSVLSEDKEPSVEEVKEAF 216
            + K ++  + RED+EMVM         + E L + + S+E+S L ++KEPS+EE+KE F
Sbjct: 88  FDNKRDERNICREDVEMVMENFGLFCSRESEDLKEWMDSDELSQLFDEKEPSLEEIKETF 147

Query: 215 DVFDENKDGFVDATELQRILCSLGFTEGAKVEECEKMIRAFDENGDGRIDINEFVKFMEN 36
           +VFD N DGF++A+ELQR+   LG  E  ++E+C K+IR FDENGDGR+D NEFVKFMEN
Sbjct: 148 NVFDHNSDGFIEASELQRVFYILGLKEELELEKCRKIIRIFDENGDGRLDFNEFVKFMEN 207

Query: 35  SF 30
           SF
Sbjct: 208 SF 209


>ref|XP_003612498.1| Calcium-binding protein CML42 [Medicago truncatula]
           gi|355513833|gb|AES95456.1| Calcium-binding protein
           CML42 [Medicago truncatula]
          Length = 200

 Score =  135 bits (339), Expect = 7e-30
 Identities = 79/178 (44%), Positives = 105/178 (58%), Gaps = 7/178 (3%)
 Frame = -3

Query: 548 FIGLLLFDGVLKWVTGFMKFYSSSRCFLQSQTEVVIGKSKGWEERRITDSGTVKRKVSLN 369
           F GL+ F           KF+S+   FL  Q      + KG ++   T+S         N
Sbjct: 29  FFGLIDFFIYSTLFIRIQKFFSTFWFFLLCQLRSGDYEVKGEKQVLETES---------N 79

Query: 368 KKVEDGKLSREDMEMVMGH-------DEEILHQRLGSNEMSVLSEDKEPSVEEVKEAFDV 210
              E G++ R ++E VM         + + L ++ GSNE+S L ++ EPS+EEVK AFDV
Sbjct: 80  VSRESGEIKRVEVETVMAKMGIFCSSESDELDEKYGSNELSELFDENEPSLEEVKMAFDV 139

Query: 209 FDENKDGFVDATELQRILCSLGFTEGAKVEECEKMIRAFDENGDGRIDINEFVKFMEN 36
           FDENKDGF+DA ELQR++C LG  EG +V+ C+KMI+ FDEN DGRID  EFVK MEN
Sbjct: 140 FDENKDGFIDAKELQRVMCILGLNEGLEVKNCQKMIKNFDENQDGRIDFTEFVKIMEN 197


>ref|XP_002531850.1| calcium ion binding protein, putative [Ricinus communis]
           gi|223528500|gb|EEF30528.1| calcium ion binding protein,
           putative [Ricinus communis]
          Length = 168

 Score =  135 bits (339), Expect = 7e-30
 Identities = 77/166 (46%), Positives = 101/166 (60%), Gaps = 9/166 (5%)
 Frame = -3

Query: 509 VTGFMKFYSSSRCFLQSQTEVVIGKSKGWEER--RITDSGTVKRKVSLNKKVEDGKLSRE 336
           +    KF+S     L+SQ       S  WEE   +  DS    ++   + K +   + RE
Sbjct: 4   ICSIQKFFSRFWFSLRSQLS-----SNAWEEENNKNQDSELSNQQGCFDNKKDHRNIDRE 58

Query: 335 DMEMVMGH-------DEEILHQRLGSNEMSVLSEDKEPSVEEVKEAFDVFDENKDGFVDA 177
           ++EMVMG+       + E L    G +E+S L ++KEPS+EEVK AFDVFDENKDGF+DA
Sbjct: 59  EVEMVMGNLGLFCSTESEKLEDSKGFDELSHLFDEKEPSLEEVKGAFDVFDENKDGFIDA 118

Query: 176 TELQRILCSLGFTEGAKVEECEKMIRAFDENGDGRIDINEFVKFME 39
            ELQR+L  LG  EG +++ C  MIRA D+N DGRID NEFVKFME
Sbjct: 119 EELQRVLHVLGLKEGLELQNCRNMIRALDDNKDGRIDFNEFVKFME 164


Top