BLASTX nr result

ID: Cimicifuga21_contig00008483 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00008483
         (713 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002318362.1| multidrug resistance protein ABC transporter...   121   3e-46
ref|XP_002331826.1| multidrug resistance protein ABC transporter...   121   5e-46
ref|XP_003536438.1| PREDICTED: ABC transporter C family member 1...   122   6e-46
ref|XP_002513606.1| multidrug resistance-associated protein 1, 3...   120   1e-45
ref|XP_002267650.2| PREDICTED: ABC transporter C family member 1...   124   2e-44

>ref|XP_002318362.1| multidrug resistance protein ABC transporter family [Populus
           trichocarpa] gi|222859035|gb|EEE96582.1| multidrug
           resistance protein ABC transporter family [Populus
           trichocarpa]
          Length = 1240

 Score =  121 bits (304), Expect(3) = 3e-46
 Identities = 61/101 (60%), Positives = 77/101 (76%)
 Frame = -1

Query: 347 GLYLGMCLFFAKCVKSLSQLQWYFRSRAIRLKIWSILSTAIYKKHLRLSNAAKLRYSMGE 168
           G  L + LFF+K ++S++Q QWYFRSR I LK+ S+L+ AIYKK LRLSN  +L +S GE
Sbjct: 115 GYVLALTLFFSKNLESVAQRQWYFRSRLIGLKVKSLLTAAIYKKQLRLSNLGRLTHSSGE 174

Query: 167 IINYVTVDAYRIGEFSF*FYQK*TTCLQLCIALGIFIHAVG 45
           ++NYVTVDAYRIGEF F F+Q  TT LQLCI+L I   A+G
Sbjct: 175 VMNYVTVDAYRIGEFPFWFHQTWTTSLQLCISLVILYRAMG 215



 Score = 67.0 bits (162), Expect(3) = 3e-46
 Identities = 33/68 (48%), Positives = 48/68 (70%)
 Frame = -3

Query: 624 KRKMFQDSDIPRLHKEEQANTCYPIFLKQLNTPNRISQFTKPSLRWTLMVYQWKEIYIIG 445
           K K  +D DIP+L  E++A +CY  FL+QLN  ++ ++ ++PSL W ++   WKEI I G
Sbjct: 23  KAKTLEDEDIPKLRVEDRAESCYFEFLEQLNK-HKQAESSQPSLLWIIIFCHWKEILISG 81

Query: 444 LFALVKIL 421
           LFAL+KIL
Sbjct: 82  LFALLKIL 89



 Score = 43.9 bits (102), Expect(3) = 3e-46
 Identities = 20/30 (66%), Positives = 24/30 (80%)
 Frame = -2

Query: 421 TLSCGPLLLNAFIYSAKGNRTFEFEGYILA 332
           TLS GPLLLNAFI  A+G   F++EGY+LA
Sbjct: 90  TLSAGPLLLNAFILVAEGKAGFKYEGYVLA 119


>ref|XP_002331826.1| multidrug resistance protein ABC transporter family [Populus
           trichocarpa] gi|222875064|gb|EEF12195.1| multidrug
           resistance protein ABC transporter family [Populus
           trichocarpa]
          Length = 1423

 Score =  121 bits (303), Expect(3) = 5e-46
 Identities = 61/101 (60%), Positives = 75/101 (74%)
 Frame = -1

Query: 347 GLYLGMCLFFAKCVKSLSQLQWYFRSRAIRLKIWSILSTAIYKKHLRLSNAAKLRYSMGE 168
           G  L + LFF+K ++SLSQ QWYFRSR + LK+ S+L+ AIYKK  RLSN  +L +S GE
Sbjct: 291 GYVLVLTLFFSKSLESLSQRQWYFRSRLVGLKVRSLLTAAIYKKQQRLSNVGRLMHSGGE 350

Query: 167 IINYVTVDAYRIGEFSF*FYQK*TTCLQLCIALGIFIHAVG 45
           I+NYVTVDAYRIGEF F F+Q  TT  QLC++L I   AVG
Sbjct: 351 IMNYVTVDAYRIGEFPFWFHQTWTTSFQLCLSLAILFRAVG 391



 Score = 68.2 bits (165), Expect(3) = 5e-46
 Identities = 32/70 (45%), Positives = 48/70 (68%)
 Frame = -3

Query: 630 KKKRKMFQDSDIPRLHKEEQANTCYPIFLKQLNTPNRISQFTKPSLRWTLMVYQWKEIYI 451
           K K K  +D DIP+L + E+A +CY  FL+QLN   + ++ ++PSL WT++   WK+I I
Sbjct: 197 KGKEKTLEDEDIPKLREAERAESCYMEFLEQLNKQKQ-AESSQPSLLWTIVFCHWKDIVI 255

Query: 450 IGLFALVKIL 421
            G FA++KIL
Sbjct: 256 SGFFAMLKIL 265



 Score = 42.4 bits (98), Expect(3) = 5e-46
 Identities = 19/29 (65%), Positives = 23/29 (79%)
 Frame = -2

Query: 421 TLSCGPLLLNAFIYSAKGNRTFEFEGYIL 335
           TLS GPLLLNAFI  A+G   F++EGY+L
Sbjct: 266 TLSAGPLLLNAFILVAEGKAGFKYEGYVL 294


>ref|XP_003536438.1| PREDICTED: ABC transporter C family member 10-like [Glycine max]
          Length = 1479

 Score =  122 bits (307), Expect(3) = 6e-46
 Identities = 62/101 (61%), Positives = 76/101 (75%)
 Frame = -1

Query: 347 GLYLGMCLFFAKCVKSLSQLQWYFRSRAIRLKIWSILSTAIYKKHLRLSNAAKLRYSMGE 168
           G  L + LFF K ++SLSQ QWYFR R I LK+ S+L+ AIY+K LRLSN+A+L +S GE
Sbjct: 346 GFVLAISLFFTKNIESLSQRQWYFRCRLIGLKVRSLLTAAIYRKQLRLSNSARLMHSSGE 405

Query: 167 IINYVTVDAYRIGEFSF*FYQK*TTCLQLCIALGIFIHAVG 45
           I+NYVTVDAYRIGEF + F+Q  TT  QLCI+L I   AVG
Sbjct: 406 IMNYVTVDAYRIGEFPYWFHQTWTTSFQLCISLVILFRAVG 446



 Score = 65.9 bits (159), Expect(3) = 6e-46
 Identities = 31/68 (45%), Positives = 44/68 (64%)
 Frame = -3

Query: 624 KRKMFQDSDIPRLHKEEQANTCYPIFLKQLNTPNRISQFTKPSLRWTLMVYQWKEIYIIG 445
           K K   D DIPRL +E++A +CY +FL QLN      Q  +PS+  T+++  WKEI I G
Sbjct: 253 KEKTLHDEDIPRLREEDRAESCYLLFLDQLNRQKLNDQSWQPSVLRTIILCHWKEILISG 312

Query: 444 LFALVKIL 421
            FAL+K++
Sbjct: 313 FFALLKVV 320



 Score = 42.7 bits (99), Expect(3) = 6e-46
 Identities = 18/29 (62%), Positives = 25/29 (86%)
 Frame = -2

Query: 418 LSCGPLLLNAFIYSAKGNRTFEFEGYILA 332
           LS GPLLLN+FI  A+GN +F++EG++LA
Sbjct: 322 LSSGPLLLNSFILVAEGNESFKYEGFVLA 350


>ref|XP_002513606.1| multidrug resistance-associated protein 1, 3 (mrp1, 3),
           abc-transoprter, putative [Ricinus communis]
           gi|223547514|gb|EEF49009.1| multidrug
           resistance-associated protein 1, 3 (mrp1, 3),
           abc-transoprter, putative [Ricinus communis]
          Length = 1481

 Score =  120 bits (302), Expect(3) = 1e-45
 Identities = 62/101 (61%), Positives = 76/101 (75%)
 Frame = -1

Query: 347 GLYLGMCLFFAKCVKSLSQLQWYFRSRAIRLKIWSILSTAIYKKHLRLSNAAKLRYSMGE 168
           G  L + LF +K ++SLSQ QWYFRSR I LK+ S+L+ AIY+K LRLSN  +L +S  E
Sbjct: 348 GYVLALTLFISKSLESLSQRQWYFRSRLIGLKVRSLLTAAIYRKQLRLSNTGRLMHSGSE 407

Query: 167 IINYVTVDAYRIGEFSF*FYQK*TTCLQLCIALGIFIHAVG 45
           I+NYVTVDAYRIGEF F F+Q  TT LQLCI+L I  +AVG
Sbjct: 408 IMNYVTVDAYRIGEFPFWFHQTWTTSLQLCISLVILFNAVG 448



 Score = 66.6 bits (161), Expect(3) = 1e-45
 Identities = 31/70 (44%), Positives = 46/70 (65%)
 Frame = -3

Query: 630 KKKRKMFQDSDIPRLHKEEQANTCYPIFLKQLNTPNRISQFTKPSLRWTLMVYQWKEIYI 451
           K K K  +D DIP+L + EQA +CY +FL+Q+N   +    ++PSL  T++   WK+I I
Sbjct: 253 KGKEKTLEDEDIPKLRQAEQAESCYLMFLEQVNKQKQAKSSSQPSLFRTIISCHWKDILI 312

Query: 450 IGLFALVKIL 421
            G FA++KIL
Sbjct: 313 SGFFAMLKIL 322



 Score = 42.7 bits (99), Expect(3) = 1e-45
 Identities = 19/30 (63%), Positives = 24/30 (80%)
 Frame = -2

Query: 421 TLSCGPLLLNAFIYSAKGNRTFEFEGYILA 332
           TLS GPLLLN FI  A+G  +F++EGY+LA
Sbjct: 323 TLSAGPLLLNNFILVAEGKASFKYEGYVLA 352


>ref|XP_002267650.2| PREDICTED: ABC transporter C family member 10-like [Vitis vinifera]
          Length = 1532

 Score =  124 bits (310), Expect(3) = 2e-44
 Identities = 65/101 (64%), Positives = 76/101 (75%)
 Frame = -1

Query: 347 GLYLGMCLFFAKCVKSLSQLQWYFRSRAIRLKIWSILSTAIYKKHLRLSNAAKLRYSMGE 168
           G  L M LF +K V+SLSQ QWYFRSR I L++ S+L+ AIYKK LRLSNAAK+ +S GE
Sbjct: 400 GYVLAMALFVSKNVESLSQRQWYFRSRLIGLRVRSLLTAAIYKKQLRLSNAAKMIHSSGE 459

Query: 167 IINYVTVDAYRIGEFSF*FYQK*TTCLQLCIALGIFIHAVG 45
           I NYVTVDAYRIGEF F F+Q  TT LQLCI L I  + +G
Sbjct: 460 ITNYVTVDAYRIGEFPFWFHQTWTTSLQLCIVLVILFNILG 500



 Score = 60.5 bits (145), Expect(3) = 2e-44
 Identities = 27/67 (40%), Positives = 46/67 (68%)
 Frame = -3

Query: 621 RKMFQDSDIPRLHKEEQANTCYPIFLKQLNTPNRISQFTKPSLRWTLMVYQWKEIYIIGL 442
           +K  ++ DIP+L +E++A +CY  FL++L    +I   ++PS+   +++  WK+I+I G 
Sbjct: 308 KKTLENEDIPKLREEDRAESCYLQFLEELIKQKQIEPSSQPSILRVIILCYWKDIFISGF 367

Query: 441 FALVKIL 421
           FALVKIL
Sbjct: 368 FALVKIL 374



 Score = 41.6 bits (96), Expect(3) = 2e-44
 Identities = 20/30 (66%), Positives = 23/30 (76%)
 Frame = -2

Query: 421 TLSCGPLLLNAFIYSAKGNRTFEFEGYILA 332
           TLS GPLLLNAFI  A+G   F+ EGY+LA
Sbjct: 375 TLSTGPLLLNAFIKVAEGKELFKNEGYVLA 404


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