BLASTX nr result

ID: Cimicifuga21_contig00008481 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00008481
         (1296 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002265924.1| PREDICTED: uncharacterized protein LOC100263...   196   1e-47
emb|CAN64557.1| hypothetical protein VITISV_040161 [Vitis vinifera]   191   3e-46
emb|CAN77202.1| hypothetical protein VITISV_001593 [Vitis vinifera]   170   8e-40
ref|XP_002327790.1| predicted protein [Populus trichocarpa] gi|2...   163   1e-37
ref|XP_002313784.1| predicted protein [Populus trichocarpa] gi|2...   159   1e-36

>ref|XP_002265924.1| PREDICTED: uncharacterized protein LOC100263337 [Vitis vinifera]
            gi|147769768|emb|CAN74471.1| hypothetical protein
            VITISV_033186 [Vitis vinifera]
          Length = 252

 Score =  196 bits (498), Expect = 1e-47
 Identities = 111/277 (40%), Positives = 162/277 (58%), Gaps = 8/277 (2%)
 Frame = +1

Query: 241  MDFSDFDNVKREKANAMMRYRRLRKIANLFRLFEVVFALFVFSWLSTQLPSVLHFTGKFF 420
            MD  DFD+VK EKANAM++YRRLR +  LFR  E+   L +F W+ T LP  +  +G++F
Sbjct: 1    MDSFDFDSVKAEKANAMLKYRRLRNVTKLFRFAELFLVLILFFWIFTHLPFAIQISGEYF 60

Query: 421  KQLSVVLVSPRFVFLIGNAIIITLFVKSGQFSSDSVSGIKEETHLYDEFVKNSENRQ--- 591
            +++S V+ S  FVFL  NAII+ L  KS QFS  ++     ET +Y+EFVK SEN +   
Sbjct: 61   RKISTVIASHLFVFLFCNAIIVILLFKSSQFSDRNLPVHNAETDIYEEFVKKSENNRPNS 120

Query: 592  -----KIYTPVEEIVFQDKQTVCEERAGRDSLPHSPRKSKHRDSPPHTPRSNKHRDSPPI 756
                  +    E +V++DKQ +C                       +T R    +  P +
Sbjct: 121  QSEDLSLSQEPEVVVYEDKQMIC---------------------AANTLRPTCEKVVPTV 159

Query: 757  TPRSKQSDLVPKRKSYRRSQSENIKREIDEKPKRELRRSETEKCREVENSCKDPARNSVG 936
            T   + S +    K YRRSQSE + R+  EK +R L+RS+TEKC+++  S  DPA+    
Sbjct: 160  TDSKRDSYV----KVYRRSQSEKLNRDRSEKSRRILQRSDTEKCQQIVISGDDPAKTWYP 215

Query: 937  EKEMSSEEFQQRIEAFIEKQAKFHLEESMAIVLQNQS 1047
            E E+S+E+FQ+ IEAFI ++ +F  +ES+AIVLQ+Q+
Sbjct: 216  EDELSNEDFQRTIEAFIARELRFRRQESLAIVLQDQN 252


>emb|CAN64557.1| hypothetical protein VITISV_040161 [Vitis vinifera]
          Length = 273

 Score =  191 bits (486), Expect = 3e-46
 Identities = 120/283 (42%), Positives = 170/283 (60%), Gaps = 14/283 (4%)
 Frame = +1

Query: 241  MDFSDFDNVKREKANAMMRYRRLRKIANLFRLFEVVFALFVFS-WLSTQLPSVLHFTGKF 417
            MD  DFD VK EKANAM  Y  LRK AN  R+ EV  ALF+   W S ++ + +    ++
Sbjct: 1    MDSIDFDXVKLEKANAMRXYHTLRKFANFLRVLEVSVALFIMLFWSSKRVSNAVKIFSEY 60

Query: 418  FKQLSVVLVSPRFVFLIGNAIIITLFVKSGQFSSDSVSGIKEETHLYDEFVKNSENRQKI 597
             ++L VVL +PRF+FLIGNAIIITLFVKSG+FS ++      E  LYDE+V++SEN QK+
Sbjct: 61   LRELCVVLANPRFMFLIGNAIIITLFVKSGRFSGENPDRGNAEPDLYDEYVQHSENSQKV 120

Query: 598  YTPVEEIVFQDKQTVCEERAGRDSLPHSPRKSK---HRDSPPHTPRSNK---------HR 741
             + ++         V +     D + HS  + K     DSP      +K         H 
Sbjct: 121  VSQID-------CAVTKVSHDDDFVKHSESQQKGFSEIDSPVPATSDDKQIVCWENALHT 173

Query: 742  DSP-PITPRSKQSDLVPKRKSYRRSQSENIKREIDEKPKRELRRSETEKCREVENSCKDP 918
              P P+T  +K+   VP+ K YRR++S  I+ E  EKP RELRRSET+K +++++S    
Sbjct: 174  VLPDPVTTVTKK---VPEXKFYRRTKSATIRPESAEKPSRELRRSETDKFQKMDSSGXKS 230

Query: 919  ARNSVGEKEMSSEEFQQRIEAFIEKQAKFHLEESMAIVLQNQS 1047
            AR     +E+S+EEF++++EAFIEKQ +   EE++AIVL  Q+
Sbjct: 231  ARRLSRVEELSNEEFRRKVEAFIEKQQRLLREENVAIVLSKQN 273


>emb|CAN77202.1| hypothetical protein VITISV_001593 [Vitis vinifera]
          Length = 216

 Score =  170 bits (430), Expect = 8e-40
 Identities = 108/268 (40%), Positives = 148/268 (55%), Gaps = 3/268 (1%)
 Frame = +1

Query: 241  MDFSDFDNVKREKANAMMRYRRLRKIANLFRLFEVVFALFVFSWLSTQLPSVLHFTGKFF 420
            MD  + D++K EKANA++RYR+LRKI NLFR+ EV   L + S  S QLP  +  +G++F
Sbjct: 1    MDSFEIDSIKVEKANAILRYRQLRKITNLFRVIEVCLVLILVSKFSFQLPFAIKVSGEYF 60

Query: 421  KQLSVVLVSPRFVFLIGNAIIITLFVKSGQFSSDSVSGIKEETHLYDEFVKNSE-NRQKI 597
            + LSV L+SPRFVF++GNAIII LF KSGQFS  + +   +ETHLY+E V+ SE +R +I
Sbjct: 61   RDLSVTLISPRFVFVVGNAIIIILFAKSGQFSGQNQAEKYDETHLYNEIVEKSEKSRMEI 120

Query: 598  YTPVEE-IVFQDKQTVCEERAGRDSLPHSPRKSKHRDSPPHTPRSNKHRDSPPITPRSKQ 774
             T  EE +V  D  T  E +  R +   +P K                            
Sbjct: 121  STSTEETVVMVDXYTTHEAKVYRRTQSENPIKDN-------------------------- 154

Query: 775  SDLVPKRKSYRRSQSENIKREIDEKPKRELRRSETEKCREVENSCKDPARNSVGEKEMSS 954
                                   +K  RELRRS TEKCR+  +SC+     +  E +MS+
Sbjct: 155  ----------------------SDKXCRELRRSVTEKCRKXTDSCE----KNYSEDDMSN 188

Query: 955  EEFQQRIEAFIEKQAKFHL-EESMAIVL 1035
            EEF++ +EAFI +Q +F   EESMA+VL
Sbjct: 189  EEFRRAVEAFIARQQRFRREEESMAVVL 216


>ref|XP_002327790.1| predicted protein [Populus trichocarpa] gi|222836875|gb|EEE75268.1|
            predicted protein [Populus trichocarpa]
          Length = 281

 Score =  163 bits (412), Expect = 1e-37
 Identities = 105/297 (35%), Positives = 162/297 (54%), Gaps = 28/297 (9%)
 Frame = +1

Query: 241  MDFSDFDNVKREKANAMMRYRRLRKIANLFRLFEVVFALFVFSWLSTQLPSVLHFTGKFF 420
            MDFS+FD+VK EKANA+++Y RL+ +  LFRL E   A+ + SW+  +LP  +  +G+FF
Sbjct: 1    MDFSNFDSVKVEKANAILKYNRLQTLTKLFRLLEFCLAIILLSWIFNKLPFAVKISGEFF 60

Query: 421  KQLSVVLVSPRFVFLIGNAIIITLFVKSGQFSSDSVSGIKEETHLYDEFVKNSENRQKIY 600
            ++L+ ++ SP FVFL+ N II TL  KSG+FS ++      +T L++E +KN+ N     
Sbjct: 61   RRLAGIVASPLFVFLLSNGIIATLIAKSGRFSGENYGADNADTQLHEELIKNTGNNHNCP 120

Query: 601  TP--------------------------VEEIVFQDKQTVCEERAGRDSLPHSPRKSKHR 702
             P                          VEE+VFQ+K  +  E    ++   S R++++ 
Sbjct: 121  KPFLSQNPNVLLSHAATSTATSTGTTKKVEEVVFQEKHIIISE----ENAFTSTRENENE 176

Query: 703  DSPPHTPRSNKHRDSPPITPRSKQSDLVPKRKSYRRSQSENIKREIDEKPKRELRRSETE 882
            D   H P ++ + D     P S + +L       RR++SE + R+   K K++LRRSETE
Sbjct: 177  D---HDPEADMYAD-----PDSDRENL-----KIRRTKSEEMGRKNYVKEKKQLRRSETE 223

Query: 883  K--CREVENSCKDPARNSVGEKEMSSEEFQQRIEAFIEKQAKFHLEESMAIVLQNQS 1047
            K   RE    C+        E  +S EEF + I+ FI +  +F  +ESM++V QNQS
Sbjct: 224  KLGSREENLFCR--------EDGLSDEEFHRAIDEFIARHLRFRRQESMSVV-QNQS 271


>ref|XP_002313784.1| predicted protein [Populus trichocarpa] gi|222850192|gb|EEE87739.1|
            predicted protein [Populus trichocarpa]
          Length = 225

 Score =  159 bits (403), Expect = 1e-36
 Identities = 100/266 (37%), Positives = 147/266 (55%), Gaps = 1/266 (0%)
 Frame = +1

Query: 241  MDFSDFDNVKREKANAMMRYRRLRKIANLFRLFEVVFALFVFSWLSTQLPSVLHFTGKFF 420
            MD  +  ++K EKA A+ ++R++RKIA+LFRL E+   L + S  S QLP  +  + ++F
Sbjct: 1    MDSFNITSIKIEKAKAIKKHRKIRKIASLFRLIEIGVVLALISRFSIQLPVAVKNSSEYF 60

Query: 421  KQLSVVLVSPRFVFLIGNAIIITLFVKSGQFSSDSVSGIKEETHLYDEFVKNSENRQKIY 600
            K L+V+LVSPRFVF++GN I+ITLF KSGQFS    +G    T LYDEFV+ SE  Q+  
Sbjct: 61   KDLTVILVSPRFVFVLGNMIVITLFAKSGQFSGQDSNGKNPSTDLYDEFVEKSEKSQE-- 118

Query: 601  TPVEEIVFQDKQ-TVCEERAGRDSLPHSPRKSKHRDSPPHTPRSNKHRDSPPITPRSKQS 777
            T   E   ++KQ T  E +   D+     RK                             
Sbjct: 119  THQYEAECREKQVTYVEYKVTEDTSTSLERK----------------------------- 149

Query: 778  DLVPKRKSYRRSQSENIKREIDEKPKRELRRSETEKCREVENSCKDPARNSVGEKEMSSE 957
                    Y RS+SE ++R       RELRRS T+KCR+  +S K+  ++S  + +MS++
Sbjct: 150  -------KYHRSESEKLER---PDSSRELRRSATDKCRKTIDSAKESEKSSSPKDKMSND 199

Query: 958  EFQQRIEAFIEKQAKFHLEESMAIVL 1035
            EF+  IEAFI +Q +F ++E  + +L
Sbjct: 200  EFRSTIEAFIARQKRFLIDEENSYIL 225


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