BLASTX nr result
ID: Cimicifuga21_contig00008474
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Cimicifuga21_contig00008474 (922 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value emb|CAN82880.1| hypothetical protein VITISV_008554 [Vitis vinifera] 50 3e-14 ref|XP_002280130.1| PREDICTED: uncharacterized protein LOC100266... 50 3e-14 ref|XP_002308518.1| predicted protein [Populus trichocarpa] gi|2... 37 3e-09 ref|XP_004141347.1| PREDICTED: uncharacterized protein LOC101215... 40 1e-06 >emb|CAN82880.1| hypothetical protein VITISV_008554 [Vitis vinifera] Length = 352 Score = 50.1 bits (118), Expect(3) = 3e-14 Identities = 26/63 (41%), Positives = 37/63 (58%) Frame = -1 Query: 391 GNVALQEDFNSIPKFVGALVVWFANGLNLCRQGSLSGKPLGSNP*GFHRCPQVEHGASCK 212 G+ ALQE F+ I KF GA+++ ++G N + SG P S P + C +V+ SCK Sbjct: 54 GSAALQEAFDCISKFAGAVLLRLSSGSNSNIRHRSSGDPHVSKPKNWKSCAKVDQTCSCK 113 Query: 211 HNL 203 HNL Sbjct: 114 HNL 116 Score = 43.1 bits (100), Expect(3) = 3e-14 Identities = 19/44 (43%), Positives = 28/44 (63%) Frame = -2 Query: 543 RNSWLFFRDLNGGSSYISPTKTFLSQGFEAFVSQFSSYVESSCY 412 RN WLFF D +GGS YI PT++ + +S +S+V++S Y Sbjct: 2 RNIWLFFMDFDGGSPYIDPTESISNSFGGHLLSHVTSFVDNSVY 45 Score = 31.6 bits (70), Expect(3) = 3e-14 Identities = 21/57 (36%), Positives = 32/57 (56%), Gaps = 4/57 (7%) Frame = -3 Query: 200 LVGLCSNP*SRPESSIRVFFW*GCKSTMTH----MEQLQSFPELSLAAALVPPFENL 42 L G C + S+ ++S R+ F T+ ++ L+S P +LAAALVPP +NL Sbjct: 116 LTGFCFSSRSKGKASGRLPFDEVSNFTIRQFCREVQGLESIPVFTLAAALVPPLDNL 172 >ref|XP_002280130.1| PREDICTED: uncharacterized protein LOC100266232 [Vitis vinifera] gi|296081726|emb|CBI20731.3| unnamed protein product [Vitis vinifera] Length = 422 Score = 49.7 bits (117), Expect(3) = 3e-14 Identities = 26/63 (41%), Positives = 37/63 (58%) Frame = -1 Query: 391 GNVALQEDFNSIPKFVGALVVWFANGLNLCRQGSLSGKPLGSNP*GFHRCPQVEHGASCK 212 G+ ALQE F+ I KF GA+++ ++G N + SG P S P + C +V+ SCK Sbjct: 54 GSAALQEAFDCISKFAGAVLLQLSSGSNSNIRHRSSGDPHVSKPKNWKSCAKVDPTCSCK 113 Query: 211 HNL 203 HNL Sbjct: 114 HNL 116 Score = 43.1 bits (100), Expect(3) = 3e-14 Identities = 19/44 (43%), Positives = 28/44 (63%) Frame = -2 Query: 543 RNSWLFFRDLNGGSSYISPTKTFLSQGFEAFVSQFSSYVESSCY 412 RN WLFF D +GGS YI PT++ + +S +S+V++S Y Sbjct: 2 RNIWLFFMDFDGGSPYIDPTESISNSFGGHLLSHVTSFVDNSVY 45 Score = 31.6 bits (70), Expect(3) = 3e-14 Identities = 21/57 (36%), Positives = 32/57 (56%), Gaps = 4/57 (7%) Frame = -3 Query: 200 LVGLCSNP*SRPESSIRVFFW*GCKSTMTH----MEQLQSFPELSLAAALVPPFENL 42 L G C + S+ ++S R+ F T+ ++ L+S P +LAAALVPP +NL Sbjct: 116 LTGFCFSSRSKGKASGRLPFDEVSNFTIRQFCREVQGLESIPVFTLAAALVPPLDNL 172 >ref|XP_002308518.1| predicted protein [Populus trichocarpa] gi|222854494|gb|EEE92041.1| predicted protein [Populus trichocarpa] Length = 422 Score = 37.0 bits (84), Expect(3) = 3e-09 Identities = 28/61 (45%), Positives = 33/61 (54%), Gaps = 4/61 (6%) Frame = -3 Query: 212 TQSYLVGLCSNP*SRPESSIRVFFW*GCKSTMTHM----EQLQSFPELSLAAALVPPFEN 45 T+ L GL S+ ESS V F M + E+ QSFP LSLAAAL+PPF N Sbjct: 105 TRHDLAGLGFGSISKGESSHPVVFSKISNFVMRLLHREAERRQSFPVLSLAAALIPPFGN 164 Query: 44 L 42 L Sbjct: 165 L 165 Score = 36.2 bits (82), Expect(3) = 3e-09 Identities = 22/63 (34%), Positives = 31/63 (49%), Gaps = 2/63 (3%) Frame = -1 Query: 385 VALQEDFNSIPKFVGALVVWF--ANGLNLCRQGSLSGKPLGSNP*GFHRCPQVEHGASCK 212 +A QE N + K G L+ WF A+ NL RQ +SG P QV++ S + Sbjct: 49 MAFQEALNHVSKLAGGLIFWFTSASSSNLSRQ--ISGNQRSPRPGSCKSPAQVKNSTSTR 106 Query: 211 HNL 203 H+L Sbjct: 107 HDL 109 Score = 34.3 bits (77), Expect(3) = 3e-09 Identities = 18/34 (52%), Positives = 23/34 (67%), Gaps = 1/34 (2%) Frame = -2 Query: 519 DLNGGSSYISPTKTFLSQGFEAFV-SQFSSYVES 421 DLNG S Y P + LSQGF A + SQ SS+V++ Sbjct: 2 DLNGESQYTFPLEPLLSQGFGAILFSQISSFVDN 35 >ref|XP_004141347.1| PREDICTED: uncharacterized protein LOC101215994 [Cucumis sativus] gi|449486719|ref|XP_004157380.1| PREDICTED: uncharacterized protein LOC101231588 [Cucumis sativus] Length = 170 Score = 39.7 bits (91), Expect(3) = 1e-06 Identities = 20/51 (39%), Positives = 31/51 (60%) Frame = -2 Query: 543 RNSWLFFRDLNGGSSYISPTKTFLSQGFEAFVSQFSSYVESSCYLPRYSFL 391 RN+W+FF DL+GGS YI P + F F S SS++++S + R ++ Sbjct: 2 RNNWVFFIDLDGGSPYILPIEPFGGHLF----SHISSFMDNSLFQSRNLYM 48 Score = 32.7 bits (73), Expect(3) = 1e-06 Identities = 26/90 (28%), Positives = 41/90 (45%) Frame = -1 Query: 394 SGNVALQEDFNSIPKFVGALVVWFANGLNLCRQGSLSGKPLGSNP*GFHRCPQVEHGASC 215 +G++ALQE FN K GAL++W ++ ++ GSN F +V S Sbjct: 49 TGSLALQEAFNCFSKIAGALLIWCSSTSTANVTREIADDLHGSNSRSFKNFSEVRGIRSG 108 Query: 214 KHNLILWGCVPILDQDRSLLSVFFFGKVAS 125 + L G + D+ L + F GK+ S Sbjct: 109 R--LGSGGFHFSFNLDKELSNPIFLGKLGS 136 Score = 26.2 bits (56), Expect(3) = 1e-06 Identities = 12/19 (63%), Positives = 14/19 (73%) Frame = -3 Query: 98 QSFPELSLAAALVPPFENL 42 Q P L++AAALVPP NL Sbjct: 152 QLHPLLTVAAALVPPLNNL 170