BLASTX nr result

ID: Cimicifuga21_contig00008474 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00008474
         (922 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN82880.1| hypothetical protein VITISV_008554 [Vitis vinifera]    50   3e-14
ref|XP_002280130.1| PREDICTED: uncharacterized protein LOC100266...    50   3e-14
ref|XP_002308518.1| predicted protein [Populus trichocarpa] gi|2...    37   3e-09
ref|XP_004141347.1| PREDICTED: uncharacterized protein LOC101215...    40   1e-06

>emb|CAN82880.1| hypothetical protein VITISV_008554 [Vitis vinifera]
          Length = 352

 Score = 50.1 bits (118), Expect(3) = 3e-14
 Identities = 26/63 (41%), Positives = 37/63 (58%)
 Frame = -1

Query: 391 GNVALQEDFNSIPKFVGALVVWFANGLNLCRQGSLSGKPLGSNP*GFHRCPQVEHGASCK 212
           G+ ALQE F+ I KF GA+++  ++G N   +   SG P  S P  +  C +V+   SCK
Sbjct: 54  GSAALQEAFDCISKFAGAVLLRLSSGSNSNIRHRSSGDPHVSKPKNWKSCAKVDQTCSCK 113

Query: 211 HNL 203
           HNL
Sbjct: 114 HNL 116



 Score = 43.1 bits (100), Expect(3) = 3e-14
 Identities = 19/44 (43%), Positives = 28/44 (63%)
 Frame = -2

Query: 543 RNSWLFFRDLNGGSSYISPTKTFLSQGFEAFVSQFSSYVESSCY 412
           RN WLFF D +GGS YI PT++  +      +S  +S+V++S Y
Sbjct: 2   RNIWLFFMDFDGGSPYIDPTESISNSFGGHLLSHVTSFVDNSVY 45



 Score = 31.6 bits (70), Expect(3) = 3e-14
 Identities = 21/57 (36%), Positives = 32/57 (56%), Gaps = 4/57 (7%)
 Frame = -3

Query: 200 LVGLCSNP*SRPESSIRVFFW*GCKSTMTH----MEQLQSFPELSLAAALVPPFENL 42
           L G C +  S+ ++S R+ F      T+      ++ L+S P  +LAAALVPP +NL
Sbjct: 116 LTGFCFSSRSKGKASGRLPFDEVSNFTIRQFCREVQGLESIPVFTLAAALVPPLDNL 172


>ref|XP_002280130.1| PREDICTED: uncharacterized protein LOC100266232 [Vitis vinifera]
           gi|296081726|emb|CBI20731.3| unnamed protein product
           [Vitis vinifera]
          Length = 422

 Score = 49.7 bits (117), Expect(3) = 3e-14
 Identities = 26/63 (41%), Positives = 37/63 (58%)
 Frame = -1

Query: 391 GNVALQEDFNSIPKFVGALVVWFANGLNLCRQGSLSGKPLGSNP*GFHRCPQVEHGASCK 212
           G+ ALQE F+ I KF GA+++  ++G N   +   SG P  S P  +  C +V+   SCK
Sbjct: 54  GSAALQEAFDCISKFAGAVLLQLSSGSNSNIRHRSSGDPHVSKPKNWKSCAKVDPTCSCK 113

Query: 211 HNL 203
           HNL
Sbjct: 114 HNL 116



 Score = 43.1 bits (100), Expect(3) = 3e-14
 Identities = 19/44 (43%), Positives = 28/44 (63%)
 Frame = -2

Query: 543 RNSWLFFRDLNGGSSYISPTKTFLSQGFEAFVSQFSSYVESSCY 412
           RN WLFF D +GGS YI PT++  +      +S  +S+V++S Y
Sbjct: 2   RNIWLFFMDFDGGSPYIDPTESISNSFGGHLLSHVTSFVDNSVY 45



 Score = 31.6 bits (70), Expect(3) = 3e-14
 Identities = 21/57 (36%), Positives = 32/57 (56%), Gaps = 4/57 (7%)
 Frame = -3

Query: 200 LVGLCSNP*SRPESSIRVFFW*GCKSTMTH----MEQLQSFPELSLAAALVPPFENL 42
           L G C +  S+ ++S R+ F      T+      ++ L+S P  +LAAALVPP +NL
Sbjct: 116 LTGFCFSSRSKGKASGRLPFDEVSNFTIRQFCREVQGLESIPVFTLAAALVPPLDNL 172


>ref|XP_002308518.1| predicted protein [Populus trichocarpa] gi|222854494|gb|EEE92041.1|
           predicted protein [Populus trichocarpa]
          Length = 422

 Score = 37.0 bits (84), Expect(3) = 3e-09
 Identities = 28/61 (45%), Positives = 33/61 (54%), Gaps = 4/61 (6%)
 Frame = -3

Query: 212 TQSYLVGLCSNP*SRPESSIRVFFW*GCKSTMTHM----EQLQSFPELSLAAALVPPFEN 45
           T+  L GL     S+ ESS  V F       M  +    E+ QSFP LSLAAAL+PPF N
Sbjct: 105 TRHDLAGLGFGSISKGESSHPVVFSKISNFVMRLLHREAERRQSFPVLSLAAALIPPFGN 164

Query: 44  L 42
           L
Sbjct: 165 L 165



 Score = 36.2 bits (82), Expect(3) = 3e-09
 Identities = 22/63 (34%), Positives = 31/63 (49%), Gaps = 2/63 (3%)
 Frame = -1

Query: 385 VALQEDFNSIPKFVGALVVWF--ANGLNLCRQGSLSGKPLGSNP*GFHRCPQVEHGASCK 212
           +A QE  N + K  G L+ WF  A+  NL RQ  +SG      P       QV++  S +
Sbjct: 49  MAFQEALNHVSKLAGGLIFWFTSASSSNLSRQ--ISGNQRSPRPGSCKSPAQVKNSTSTR 106

Query: 211 HNL 203
           H+L
Sbjct: 107 HDL 109



 Score = 34.3 bits (77), Expect(3) = 3e-09
 Identities = 18/34 (52%), Positives = 23/34 (67%), Gaps = 1/34 (2%)
 Frame = -2

Query: 519 DLNGGSSYISPTKTFLSQGFEAFV-SQFSSYVES 421
           DLNG S Y  P +  LSQGF A + SQ SS+V++
Sbjct: 2   DLNGESQYTFPLEPLLSQGFGAILFSQISSFVDN 35


>ref|XP_004141347.1| PREDICTED: uncharacterized protein LOC101215994 [Cucumis sativus]
           gi|449486719|ref|XP_004157380.1| PREDICTED:
           uncharacterized protein LOC101231588 [Cucumis sativus]
          Length = 170

 Score = 39.7 bits (91), Expect(3) = 1e-06
 Identities = 20/51 (39%), Positives = 31/51 (60%)
 Frame = -2

Query: 543 RNSWLFFRDLNGGSSYISPTKTFLSQGFEAFVSQFSSYVESSCYLPRYSFL 391
           RN+W+FF DL+GGS YI P + F    F    S  SS++++S +  R  ++
Sbjct: 2   RNNWVFFIDLDGGSPYILPIEPFGGHLF----SHISSFMDNSLFQSRNLYM 48



 Score = 32.7 bits (73), Expect(3) = 1e-06
 Identities = 26/90 (28%), Positives = 41/90 (45%)
 Frame = -1

Query: 394 SGNVALQEDFNSIPKFVGALVVWFANGLNLCRQGSLSGKPLGSNP*GFHRCPQVEHGASC 215
           +G++ALQE FN   K  GAL++W ++         ++    GSN   F    +V    S 
Sbjct: 49  TGSLALQEAFNCFSKIAGALLIWCSSTSTANVTREIADDLHGSNSRSFKNFSEVRGIRSG 108

Query: 214 KHNLILWGCVPILDQDRSLLSVFFFGKVAS 125
           +  L   G     + D+ L +  F GK+ S
Sbjct: 109 R--LGSGGFHFSFNLDKELSNPIFLGKLGS 136



 Score = 26.2 bits (56), Expect(3) = 1e-06
 Identities = 12/19 (63%), Positives = 14/19 (73%)
 Frame = -3

Query: 98  QSFPELSLAAALVPPFENL 42
           Q  P L++AAALVPP  NL
Sbjct: 152 QLHPLLTVAAALVPPLNNL 170


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