BLASTX nr result

ID: Cimicifuga21_contig00008467 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00008467
         (928 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002267115.1| PREDICTED: transcription initiation factor T...   200   5e-49
ref|NP_001236890.1| uncharacterized protein LOC100500618 [Glycin...   199   6e-49
ref|XP_002266754.1| PREDICTED: transcription initiation factor T...   199   1e-48
ref|XP_003524747.1| PREDICTED: transcription initiation factor T...   198   1e-48
gb|ACU19541.1| unknown [Glycine max]                                  197   4e-48

>ref|XP_002267115.1| PREDICTED: transcription initiation factor TFIID subunit 10 [Vitis
           vinifera] gi|302143599|emb|CBI22352.3| unnamed protein
           product [Vitis vinifera]
          Length = 136

 Score =  200 bits (508), Expect = 5e-49
 Identities = 102/124 (82%), Positives = 110/124 (88%)
 Frame = -2

Query: 720 EDDSALSDFLASLMDYTPTIPDELVEHYVAKSGFQCPDVRLIRLVAVATQKFVAEIATDA 541
           +DDSALSDFLASLMDYTPTIPDELVEHY+AKSGFQCPDVRLIRLVAVATQKFVAE+A+DA
Sbjct: 13  DDDSALSDFLASLMDYTPTIPDELVEHYLAKSGFQCPDVRLIRLVAVATQKFVAEVASDA 72

Query: 540 LQHCKARQTAVVXXXXXXXXXXXRLTLTMEDLSKALREYGVNMKHQEYFADSPSTGVDPA 361
           LQ CKARQ+AVV           RL LTMEDLSKALRE GVN+KHQEYFADSPSTG+DPA
Sbjct: 73  LQQCKARQSAVVKDKRDKQQKDKRLILTMEDLSKALRECGVNVKHQEYFADSPSTGMDPA 132

Query: 360 SREE 349
           SR+E
Sbjct: 133 SRDE 136


>ref|NP_001236890.1| uncharacterized protein LOC100500618 [Glycine max]
           gi|255630766|gb|ACU15744.1| unknown [Glycine max]
          Length = 136

 Score =  199 bits (507), Expect = 6e-49
 Identities = 100/124 (80%), Positives = 107/124 (86%)
 Frame = -2

Query: 720 EDDSALSDFLASLMDYTPTIPDELVEHYVAKSGFQCPDVRLIRLVAVATQKFVAEIATDA 541
           +DDSALSDFLASLMDYTPTIPDELVEHY+AKSGFQCPDVRL RLVAVATQKFVAE+A DA
Sbjct: 13  DDDSALSDFLASLMDYTPTIPDELVEHYLAKSGFQCPDVRLTRLVAVATQKFVAEVAGDA 72

Query: 540 LQHCKARQTAVVXXXXXXXXXXXRLTLTMEDLSKALREYGVNMKHQEYFADSPSTGVDPA 361
           LQHCKARQ  +            RL LTMEDLSKALREYGVN+KHQEYFADSPSTG+DPA
Sbjct: 73  LQHCKARQATIPKDKRDKQQKDKRLVLTMEDLSKALREYGVNLKHQEYFADSPSTGMDPA 132

Query: 360 SREE 349
           +REE
Sbjct: 133 TREE 136


>ref|XP_002266754.1| PREDICTED: transcription initiation factor TFIID subunit 10 [Vitis
           vinifera] gi|302143597|emb|CBI22350.3| unnamed protein
           product [Vitis vinifera]
          Length = 136

 Score =  199 bits (505), Expect = 1e-48
 Identities = 100/124 (80%), Positives = 110/124 (88%)
 Frame = -2

Query: 720 EDDSALSDFLASLMDYTPTIPDELVEHYVAKSGFQCPDVRLIRLVAVATQKFVAEIATDA 541
           +DDSALSDFLASL+DYTPTIPDELVEHY+AKSGFQCPDVRLIRLVAVATQKFV E+A+DA
Sbjct: 13  DDDSALSDFLASLVDYTPTIPDELVEHYLAKSGFQCPDVRLIRLVAVATQKFVTEVASDA 72

Query: 540 LQHCKARQTAVVXXXXXXXXXXXRLTLTMEDLSKALREYGVNMKHQEYFADSPSTGVDPA 361
           LQ CKARQ+AVV           RL LTMEDLSKALREYGVN+KHQEYFADSPS+G+DPA
Sbjct: 73  LQQCKARQSAVVKDKRDKQQKDKRLILTMEDLSKALREYGVNVKHQEYFADSPSSGMDPA 132

Query: 360 SREE 349
           SR+E
Sbjct: 133 SRDE 136


>ref|XP_003524747.1| PREDICTED: transcription initiation factor TFIID subunit 10-like
           [Glycine max]
          Length = 136

 Score =  198 bits (504), Expect = 1e-48
 Identities = 99/124 (79%), Positives = 107/124 (86%)
 Frame = -2

Query: 720 EDDSALSDFLASLMDYTPTIPDELVEHYVAKSGFQCPDVRLIRLVAVATQKFVAEIATDA 541
           +DDSALSDFLASLMDYTPTIPDELVEHY+AKSGFQCPDVRL RLVAVATQKFVAE+A DA
Sbjct: 13  DDDSALSDFLASLMDYTPTIPDELVEHYLAKSGFQCPDVRLTRLVAVATQKFVAEVAGDA 72

Query: 540 LQHCKARQTAVVXXXXXXXXXXXRLTLTMEDLSKALREYGVNMKHQEYFADSPSTGVDPA 361
           LQHCKARQ  +            RL LTMEDLSKALREYGVN++HQEYFADSPSTG+DPA
Sbjct: 73  LQHCKARQATIPKDKRDKQQKDKRLVLTMEDLSKALREYGVNLRHQEYFADSPSTGMDPA 132

Query: 360 SREE 349
           +REE
Sbjct: 133 TREE 136


>gb|ACU19541.1| unknown [Glycine max]
          Length = 136

 Score =  197 bits (500), Expect = 4e-48
 Identities = 98/124 (79%), Positives = 107/124 (86%)
 Frame = -2

Query: 720 EDDSALSDFLASLMDYTPTIPDELVEHYVAKSGFQCPDVRLIRLVAVATQKFVAEIATDA 541
           +DDSALSDFLASLMDYTPTIPDELVEHY+AKSGF+CPDVRL RLVAVATQKFVAE+A DA
Sbjct: 13  DDDSALSDFLASLMDYTPTIPDELVEHYLAKSGFRCPDVRLTRLVAVATQKFVAEVAGDA 72

Query: 540 LQHCKARQTAVVXXXXXXXXXXXRLTLTMEDLSKALREYGVNMKHQEYFADSPSTGVDPA 361
           LQHCKARQ  +            RL LTMEDLSKALREYGVN++HQEYFADSPSTG+DPA
Sbjct: 73  LQHCKARQATIPKDKRDKQQKDKRLVLTMEDLSKALREYGVNLRHQEYFADSPSTGMDPA 132

Query: 360 SREE 349
           +REE
Sbjct: 133 TREE 136


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