BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00008456
         (2304 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002267278.1| PREDICTED: pentatricopeptide repeat-containi...   702   0.0  
ref|XP_002305285.1| predicted protein [Populus trichocarpa] gi|2...   665   0.0  
emb|CBI36294.3| unnamed protein product [Vitis vinifera]              642   0.0  
ref|XP_002530894.1| pentatricopeptide repeat-containing protein,...   640   0.0  
ref|XP_004152353.1| PREDICTED: pentatricopeptide repeat-containi...   630   e-178

>ref|XP_002267278.1| PREDICTED: pentatricopeptide repeat-containing protein At1g52640,
            mitochondrial-like [Vitis vinifera]
          Length = 624

 Score =  702 bits (1812), Expect = 0.0
 Identities = 332/486 (68%), Positives = 402/486 (82%), Gaps = 2/486 (0%)
 Frame = -3

Query: 2146 STQSIGSNHSSLSDD--FNEICRVLSDFRSPHHDIESALDCFSGKISTDLVEQVLKRCKN 1973
            S+Q+I  + +SLS     NEI R+LSDFR PHHD+E  L  FS KI+  LVEQVLKRCKN
Sbjct: 33   SSQTILQDPNSLSSSQYINEISRILSDFRDPHHDLERPLTAFSQKITPGLVEQVLKRCKN 92

Query: 1972 LGFSAHRFFLWARKLPGFVHSRDSHHILVEILGSGKQFPLIWDFLSEIRDGGDHEIRPEI 1793
            LGFSAHRFFLWA++LPGF HS++S+HILV+ILGS KQFPLIWDFLS++R+    EI PEI
Sbjct: 93   LGFSAHRFFLWAKRLPGFEHSKESYHILVDILGSSKQFPLIWDFLSDMRETRCCEICPEI 152

Query: 1792 FWIIFRSYCRADLPMDAIRAFEKMGDFDLKPGVDDLDQLIFMLCKKKLVKYAQEFFDRVK 1613
            FW+IFR+YCRA+LP DAIRAF +MGDF +K GV D+DQL+++LCK+K VK AQEFFD+V 
Sbjct: 153  FWLIFRAYCRANLPGDAIRAFHQMGDFGVKAGVGDVDQLLYVLCKRKHVKQAQEFFDKVN 212

Query: 1612 LEFPPSPKSYSILMRGWGEVGDSVEARKLFDEILQRGCSVDVIAFNTLLESLCRGANADE 1433
            +E  P+ K+YSILMRGWG+VGDS EARKLF+E+ +RGC+VDV+A+N+LLE+LC+G N DE
Sbjct: 213  VEVMPNAKTYSILMRGWGDVGDSSEARKLFEEMRERGCAVDVVAYNSLLEALCKGGNVDE 272

Query: 1432 AYKLFKEMGLYGLKPDACSYSVFIRASCEANDTHSAVKVLDRMRRYDLAPNVFTYNCIVK 1253
            AYKLF+EMG  GL PDACSYS+FIRA CE ND HSA +VLDRMRRY+L PNVFTYNCIVK
Sbjct: 273  AYKLFREMGSNGLAPDACSYSIFIRAYCEVNDIHSAFQVLDRMRRYNLVPNVFTYNCIVK 332

Query: 1252 LFVKNHMLGDAYLLLDEMIERGVSPDIWSYNAIQAYHCDHCEVTMALRLIIRMEKNGCMP 1073
               K+  + +AY LLDEMIERGVSPD+WSYNAIQA+HCDHCEV  ALRLI RMEK  CMP
Sbjct: 333  KLCKSEKVDEAYQLLDEMIERGVSPDLWSYNAIQAFHCDHCEVNKALRLISRMEKENCMP 392

Query: 1072 DRHTYNMVLKMLIRVGRFDRATELWESMGQRGYYAPVSTYAVMIHGLCKKKGKIEDACHY 893
            DRHTYNMVLKML+RVGRFDR T++W  M +RG+Y   STYAVM+HG CKKKGK+E+AC Y
Sbjct: 393  DRHTYNMVLKMLLRVGRFDRVTDVWGGMEERGFYPAASTYAVMVHGFCKKKGKLEEACKY 452

Query: 892  FEMMIDEGLPPYPSTCELVKDRLLGLGFWEKTQILTNKMQQSTSCSIQELSKIMAGDKAC 713
            FEMMID+G+PPY  T EL+++R++GLGF E+  +L  KM++STSC IQELS +M G+KA 
Sbjct: 453  FEMMIDDGIPPYSCTVELLRNRVIGLGFSEQIDVLAGKMERSTSCVIQELSSVMRGEKAS 512

Query: 712  RESSSE 695
                SE
Sbjct: 513  GRLRSE 518


>ref|XP_002305285.1| predicted protein [Populus trichocarpa] gi|222848249|gb|EEE85796.1|
            predicted protein [Populus trichocarpa]
          Length = 523

 Score =  665 bits (1715), Expect = 0.0
 Identities = 303/468 (64%), Positives = 390/468 (83%)
 Frame = -3

Query: 2098 NEICRVLSDFRSPHHDIESALDCFSGKISTDLVEQVLKRCKNLGFSAHRFFLWARKLPGF 1919
            NEI R+LSD R+PHHD+E++L+ FS +IST+LVEQVLKRCKNLGFSAHRFFLWA+++PGF
Sbjct: 49   NEISRILSDQRNPHHDLETSLNAFSSEISTNLVEQVLKRCKNLGFSAHRFFLWAKRIPGF 108

Query: 1918 VHSRDSHHILVEILGSGKQFPLIWDFLSEIRDGGDHEIRPEIFWIIFRSYCRADLPMDAI 1739
             HS +S+HILV ILG+ +QF ++WDFL E+R+  D EI  EI W++FRSY RA+LP DAI
Sbjct: 109  EHSEESYHILVNILGTSRQFAILWDFLIEMRESHDFEINQEIIWLVFRSYSRANLPSDAI 168

Query: 1738 RAFEKMGDFDLKPGVDDLDQLIFMLCKKKLVKYAQEFFDRVKLEFPPSPKSYSILMRGWG 1559
            RAF++M +F L+P VDDLD+L+++LCK K VK AQ+FFDRVK +F    K+YSIL+RGWG
Sbjct: 169  RAFDRMAEFGLRPSVDDLDKLLYVLCKCKHVKCAQQFFDRVKHKFEAKAKTYSILVRGWG 228

Query: 1558 EVGDSVEARKLFDEILQRGCSVDVIAFNTLLESLCRGANADEAYKLFKEMGLYGLKPDAC 1379
            ++G++VEARK+FDE+  RGC++DV+A+N+LLE+LC+G N DEAYK+F+E+G +G++PDAC
Sbjct: 229  DIGEAVEARKVFDEMRGRGCALDVLAYNSLLEALCKGGNVDEAYKMFREIGSHGVEPDAC 288

Query: 1378 SYSVFIRASCEANDTHSAVKVLDRMRRYDLAPNVFTYNCIVKLFVKNHMLGDAYLLLDEM 1199
            SY++FIRA CEAN+ HS   VLDRM+RYDL PNVFTYNCI+K   KN  + DAY LL EM
Sbjct: 289  SYAIFIRAYCEANNIHSVFSVLDRMKRYDLVPNVFTYNCIIKKLCKNGKVEDAYQLLHEM 348

Query: 1198 IERGVSPDIWSYNAIQAYHCDHCEVTMALRLIIRMEKNGCMPDRHTYNMVLKMLIRVGRF 1019
            +ERGVSPD WSYN I AYHC+H EV  A +LI  M K+ C+PDRH+YNM+LK+L+RVGRF
Sbjct: 349  MERGVSPDAWSYNTILAYHCEHSEVNRATKLISIMVKDNCLPDRHSYNMLLKLLVRVGRF 408

Query: 1018 DRATELWESMGQRGYYAPVSTYAVMIHGLCKKKGKIEDACHYFEMMIDEGLPPYPSTCEL 839
            DRATE+WESMG+RG+Y  VSTY+VMIHGLCKKKGK+E+AC YFE MIDEG+PPY ST E+
Sbjct: 409  DRATEIWESMGERGFYPSVSTYSVMIHGLCKKKGKLEEACRYFETMIDEGIPPYASTIEM 468

Query: 838  VKDRLLGLGFWEKTQILTNKMQQSTSCSIQELSKIMAGDKACRESSSE 695
            +++RL+G G  +  +IL  KM++ TSCSIQEL+K M G+KAC  S +E
Sbjct: 469  LRNRLIGFGLLDHIEILACKMERGTSCSIQELAKEMRGNKACVRSRNE 516


>emb|CBI36294.3| unnamed protein product [Vitis vinifera]
          Length = 517

 Score =  642 bits (1655), Expect = 0.0
 Identities = 312/486 (64%), Positives = 376/486 (77%), Gaps = 2/486 (0%)
 Frame = -3

Query: 2146 STQSIGSNHSSLSDD--FNEICRVLSDFRSPHHDIESALDCFSGKISTDLVEQVLKRCKN 1973
            S+Q+I  + +SLS     NEI R+LSDFR PHHD+E  L  FS KI+  LVEQVLKRCKN
Sbjct: 33   SSQTILQDPNSLSSSQYINEISRILSDFRDPHHDLERPLTAFSQKITPGLVEQVLKRCKN 92

Query: 1972 LGFSAHRFFLWARKLPGFVHSRDSHHILVEILGSGKQFPLIWDFLSEIRDGGDHEIRPEI 1793
            LGFSAH                           S KQFPLIWDFLS++R+    EI PEI
Sbjct: 93   LGFSAH---------------------------SSKQFPLIWDFLSDMRETRCCEICPEI 125

Query: 1792 FWIIFRSYCRADLPMDAIRAFEKMGDFDLKPGVDDLDQLIFMLCKKKLVKYAQEFFDRVK 1613
            FW+IFR+YCRA+LP DAIRAF +MGDF +K GV D+DQL+++LCK+K VK AQEFFD+V 
Sbjct: 126  FWLIFRAYCRANLPGDAIRAFHQMGDFGVKAGVGDVDQLLYVLCKRKHVKQAQEFFDKVN 185

Query: 1612 LEFPPSPKSYSILMRGWGEVGDSVEARKLFDEILQRGCSVDVIAFNTLLESLCRGANADE 1433
            +E  P+ K+YSILMRGWG+VGDS EARKLF+E+ +RGC+VDV+A+N+LLE+LC+G N DE
Sbjct: 186  VEVMPNAKTYSILMRGWGDVGDSSEARKLFEEMRERGCAVDVVAYNSLLEALCKGGNVDE 245

Query: 1432 AYKLFKEMGLYGLKPDACSYSVFIRASCEANDTHSAVKVLDRMRRYDLAPNVFTYNCIVK 1253
            AYKLF+EMG  GL PDACSYS+FIRA CE ND HSA +VLDRMRRY+L PNVFTYNCIVK
Sbjct: 246  AYKLFREMGSNGLAPDACSYSIFIRAYCEVNDIHSAFQVLDRMRRYNLVPNVFTYNCIVK 305

Query: 1252 LFVKNHMLGDAYLLLDEMIERGVSPDIWSYNAIQAYHCDHCEVTMALRLIIRMEKNGCMP 1073
               K+  + +AY LLDEMIERGVSPD+WSYNAIQA+HCDHCEV  ALRLI RMEK  CMP
Sbjct: 306  KLCKSEKVDEAYQLLDEMIERGVSPDLWSYNAIQAFHCDHCEVNKALRLISRMEKENCMP 365

Query: 1072 DRHTYNMVLKMLIRVGRFDRATELWESMGQRGYYAPVSTYAVMIHGLCKKKGKIEDACHY 893
            DRHTYNMVLKML+RVGRFDR T++W  M +RG+Y   STYAVM+HG CKKKGK+E+AC Y
Sbjct: 366  DRHTYNMVLKMLLRVGRFDRVTDVWGGMEERGFYPAASTYAVMVHGFCKKKGKLEEACKY 425

Query: 892  FEMMIDEGLPPYPSTCELVKDRLLGLGFWEKTQILTNKMQQSTSCSIQELSKIMAGDKAC 713
            FEMMID+G+PPY  T EL+++R++GLGF E+  +L  KM++STSC IQELS +M G+KA 
Sbjct: 426  FEMMIDDGIPPYSCTVELLRNRVIGLGFSEQIDVLAGKMERSTSCVIQELSSVMRGEKAS 485

Query: 712  RESSSE 695
                SE
Sbjct: 486  GRLRSE 491


>ref|XP_002530894.1| pentatricopeptide repeat-containing protein, putative [Ricinus
            communis] gi|223529547|gb|EEF31500.1| pentatricopeptide
            repeat-containing protein, putative [Ricinus communis]
          Length = 519

 Score =  640 bits (1652), Expect = 0.0
 Identities = 294/471 (62%), Positives = 380/471 (80%)
 Frame = -3

Query: 2107 DDFNEICRVLSDFRSPHHDIESALDCFSGKISTDLVEQVLKRCKNLGFSAHRFFLWARKL 1928
            D  NEI R+LSD R+PHHD+E +L  +S  IST LVEQVLKRCKNLGFSA RFFLWA+++
Sbjct: 42   DLVNEISRILSDHRNPHHDLELSLTTYSSHISTTLVEQVLKRCKNLGFSAQRFFLWAKRI 101

Query: 1927 PGFVHSRDSHHILVEILGSGKQFPLIWDFLSEIRDGGDHEIRPEIFWIIFRSYCRADLPM 1748
            PGF HS++S+HILV+ILGS KQF L+WDFL EIR+  D EI P++FW++FR+Y RA+LP 
Sbjct: 102  PGFDHSKESYHILVDILGSSKQFALLWDFLIEIRESQDFEISPQVFWLVFRAYSRANLPS 161

Query: 1747 DAIRAFEKMGDFDLKPGVDDLDQLIFMLCKKKLVKYAQEFFDRVKLEFPPSPKSYSILMR 1568
            DAIRAF++M +F LKP +DDLDQL+++LCK+K  K+AQ+ FDRVK +F    K+YSIL+R
Sbjct: 162  DAIRAFDRMVEFGLKPTIDDLDQLLYVLCKRKHAKHAQQIFDRVKHQFQTRAKTYSILVR 221

Query: 1567 GWGEVGDSVEARKLFDEILQRGCSVDVIAFNTLLESLCRGANADEAYKLFKEMGLYGLKP 1388
            GWG++G+SV A K+FDE+ ++ C+VDV+A+N+LLE+ C+G    EAYK+F+EMG  G+KP
Sbjct: 222  GWGDIGESVSACKVFDEMREQQCAVDVLAYNSLLEAFCKGGKVSEAYKMFREMGSNGIKP 281

Query: 1387 DACSYSVFIRASCEANDTHSAVKVLDRMRRYDLAPNVFTYNCIVKLFVKNHMLGDAYLLL 1208
            DAC++S+FIRA CEAND H A +VLD M+RYDL PNVFTYNC++K   K   + +AY LL
Sbjct: 282  DACTFSIFIRAYCEANDIHLAYRVLDEMKRYDLVPNVFTYNCMIKKLCKKEKVEEAYQLL 341

Query: 1207 DEMIERGVSPDIWSYNAIQAYHCDHCEVTMALRLIIRMEKNGCMPDRHTYNMVLKMLIRV 1028
            +E+IER   PD WSYNAI AYHC+H EV  A RLI RM K+ C+PD+H+YNM+LK+LIRV
Sbjct: 342  NEIIERSGQPDAWSYNAILAYHCEHSEVNSATRLISRMVKDNCLPDKHSYNMLLKLLIRV 401

Query: 1027 GRFDRATELWESMGQRGYYAPVSTYAVMIHGLCKKKGKIEDACHYFEMMIDEGLPPYPST 848
            GRFDRA E+WESMG++G+Y  VSTY+VM+HGLCKKKGK+E+AC YFEMMIDEG+PPY ST
Sbjct: 402  GRFDRAIEVWESMGEKGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMIDEGIPPYSST 461

Query: 847  CELVKDRLLGLGFWEKTQILTNKMQQSTSCSIQELSKIMAGDKACRESSSE 695
             E++++RL+GLG  +  +IL  KM+ ST+CSIQEL+  M G K    S SE
Sbjct: 462  VEILRNRLIGLGLLDYIEILAGKMEHSTACSIQELAIAMRGGKVHVRSRSE 512


>ref|XP_004152353.1| PREDICTED: pentatricopeptide repeat-containing protein At1g52640,
            mitochondrial-like [Cucumis sativus]
          Length = 529

 Score =  630 bits (1624), Expect = e-178
 Identities = 295/487 (60%), Positives = 385/487 (79%)
 Frame = -3

Query: 2158 FQKLSTQSIGSNHSSLSDDFNEICRVLSDFRSPHHDIESALDCFSGKISTDLVEQVLKRC 1979
            F   +T++   +  +L    +EI R+LSD R+PHHD+E  L  FS  +STDLVEQVLKRC
Sbjct: 32   FTSFATEARAGSDPTLPFLVSEISRILSDRRNPHHDLEVGLSSFSSNVSTDLVEQVLKRC 91

Query: 1978 KNLGFSAHRFFLWARKLPGFVHSRDSHHILVEILGSGKQFPLIWDFLSEIRDGGDHEIRP 1799
            KN+ FSAHRFFLWA+++PGF  S DS+HI+V+ILGS  QF ++WDFL EIR+     I  
Sbjct: 92   KNIAFSAHRFFLWAKRIPGFEPSDDSYHIVVDILGSSGQFAILWDFLIEIRETRSSVITH 151

Query: 1798 EIFWIIFRSYCRADLPMDAIRAFEKMGDFDLKPGVDDLDQLIFMLCKKKLVKYAQEFFDR 1619
            E+FW +F +Y RADLP DAIRAF +MG+F ++ GVDDLD+L++ LCK+K V +AQ+FFD+
Sbjct: 152  ELFWHVFTAYSRADLPQDAIRAFNRMGEFGIRAGVDDLDKLLYTLCKRKHVAHAQQFFDK 211

Query: 1618 VKLEFPPSPKSYSILMRGWGEVGDSVEARKLFDEILQRGCSVDVIAFNTLLESLCRGANA 1439
            VK  F PS K+YSIL RGWG VGDS  A+K+FDE+ +RGC +DV+A+N+LLE+LC+G   
Sbjct: 212  VKSVFNPSVKTYSILTRGWGVVGDSNNAQKVFDEMRERGCLIDVLAYNSLLEALCKGGKR 271

Query: 1438 DEAYKLFKEMGLYGLKPDACSYSVFIRASCEANDTHSAVKVLDRMRRYDLAPNVFTYNCI 1259
            DEAYK+F EM   G+ PDA +YS+FIR+SC+ ND H+  +VL+R +R +L PNVFTYNC+
Sbjct: 272  DEAYKMFLEMDSNGVDPDADTYSIFIRSSCQENDLHTVYRVLERTKRKNLLPNVFTYNCV 331

Query: 1258 VKLFVKNHMLGDAYLLLDEMIERGVSPDIWSYNAIQAYHCDHCEVTMALRLIIRMEKNGC 1079
            +K   K+  + +AY +LDEMIERGV+PD WSYNAIQAYHCDH EV  AL L+ RM+++ C
Sbjct: 332  IKKLCKDQNVEEAYQILDEMIERGVTPDTWSYNAIQAYHCDHSEVNSALNLVKRMDRDKC 391

Query: 1078 MPDRHTYNMVLKMLIRVGRFDRATELWESMGQRGYYAPVSTYAVMIHGLCKKKGKIEDAC 899
            +PD+HTYNMVLK+L+RVGRFDRA E+WESMG+RG+Y  VSTYAVMIHG CKKK K+E+AC
Sbjct: 392  VPDKHTYNMVLKLLVRVGRFDRANEVWESMGKRGFYPSVSTYAVMIHGFCKKKWKLEEAC 451

Query: 898  HYFEMMIDEGLPPYPSTCELVKDRLLGLGFWEKTQILTNKMQQSTSCSIQELSKIMAGDK 719
             YFEMMIDEG+PPY +T EL++DRLLG+GF ++  IL +KM++STSCSIQEL+ +M+G K
Sbjct: 452  KYFEMMIDEGIPPYIATVELLRDRLLGIGFKDQVAILGDKMKRSTSCSIQELANLMSGGK 511

Query: 718  ACRESSS 698
              RE+ S
Sbjct: 512  R-REAQS 517