BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00008450
         (1162 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002270464.1| PREDICTED: exosome complex component rrp45-l...   535   e-150
emb|CAN74356.1| hypothetical protein VITISV_000912 [Vitis vinifera]   527   e-147
ref|XP_004139042.1| PREDICTED: exosome complex component RRP45-l...   505   e-141
ref|XP_002531128.1| exosome complex exonuclease rrp45, putative ...   501   e-139
ref|XP_004170431.1| PREDICTED: exosome complex component RRP45-l...   499   e-139

>ref|XP_002270464.1| PREDICTED: exosome complex component rrp45-like [Vitis vinifera]
          Length = 467

 Score =  535 bits (1378), Expect = e-150
 Identities = 261/339 (76%), Positives = 307/339 (90%), Gaps = 1/339 (0%)
 Frame = +3

Query: 75   MEQRLGNTWKMSVNEKKFIETALLSDNRVDGRRPFDYRKLTIKFGKEDGSSEVQLGETHV 254
            MEQRL +T++M+VNEKKFIE ALLSD R+DGRRPFD+R+++IKFG+EDGSSEVQLG+THV
Sbjct: 1    MEQRLASTFRMTVNEKKFIEKALLSDLRIDGRRPFDFRRISIKFGREDGSSEVQLGQTHV 60

Query: 255  MGFVTSQLVQPYRDRPNEGTLSIYTEFSPMADPSFEAGRPGESAVELGRIIDRGLRESRA 434
            MGFVT QL+QPYRDRPNEGTLSIYTEFSPMADPSFEAGRPGE+AVELGR+IDRGLRESRA
Sbjct: 61   MGFVTGQLIQPYRDRPNEGTLSIYTEFSPMADPSFEAGRPGEAAVELGRVIDRGLRESRA 120

Query: 435  VDTESLCVLAGKLVWSVRVDLHILDNGGNLVDAANVAALSALMTFRRPECTLGGEDGQEV 614
            VD ESLCVLAGKLVWS+R+DLHI+DNGGNL+DAAN+AAL+AL+TFRRPEC+ GGEDGQE+
Sbjct: 121  VDMESLCVLAGKLVWSIRIDLHIIDNGGNLIDAANIAALAALLTFRRPECSFGGEDGQEL 180

Query: 615  IVHPPEVEDPLPLIIHHLPIAVTFAFFGDGNIVVIDPSHNEEAVMGGRMTATLNTNGDVC 794
            IVHPPEV +PLPLI+HHLPIAVTFA  G+ NI+VIDP+H+EEAVMGGRMTATLNTNGDVC
Sbjct: 181  IVHPPEVREPLPLIVHHLPIAVTFAIIGNENIMVIDPTHSEEAVMGGRMTATLNTNGDVC 240

Query: 795  AIQKAGGEGVMQSIIMQCLRIASVKAADITSKIKDAVEIYSTERAQRKIKRHSSVVPMAM 974
            AIQKAGGEG++QS+IMQCLRIASVKAADITSKIK+AVE ++TERA RKIKRHSS +  A+
Sbjct: 241  AIQKAGGEGIIQSVIMQCLRIASVKAADITSKIKNAVEAFNTERALRKIKRHSSSI--AV 298

Query: 975  DVSVPDIKTKQQDHHTI-HTVLGDLSKHRMEEVTDEAGE 1088
            DVS P  K ++  + ++   V+ +LS H ME +  E+ E
Sbjct: 299  DVSGPGAKMRENKNQSVDEKVVNELSSHHMERLKMESEE 337


>emb|CAN74356.1| hypothetical protein VITISV_000912 [Vitis vinifera]
          Length = 476

 Score =  527 bits (1358), Expect = e-147
 Identities = 261/348 (75%), Positives = 307/348 (88%), Gaps = 10/348 (2%)
 Frame = +3

Query: 75   MEQRLGNTWKMSVNEKKFIETALLSDNRVDGRRPFDYRKLTIKFGK---------EDGSS 227
            MEQRL +T++M+VNEKKFIE ALLSD R+DGRRPFD+R+++IKFG+         EDGSS
Sbjct: 1    MEQRLASTFRMTVNEKKFIEKALLSDLRIDGRRPFDFRRISIKFGRQVFIRTICAEDGSS 60

Query: 228  EVQLGETHVMGFVTSQLVQPYRDRPNEGTLSIYTEFSPMADPSFEAGRPGESAVELGRII 407
            EVQLG+THVMGFVT QL+QPYRDRPNEGTLSIYTEFSPMADPSFEAGRPGE+AVELGR+I
Sbjct: 61   EVQLGQTHVMGFVTGQLIQPYRDRPNEGTLSIYTEFSPMADPSFEAGRPGEAAVELGRVI 120

Query: 408  DRGLRESRAVDTESLCVLAGKLVWSVRVDLHILDNGGNLVDAANVAALSALMTFRRPECT 587
            DRGLRESRAVD ESLCVLAGKLVWS+R+DLHI+DNGGNL+DAAN+AAL+AL+TFRRPEC+
Sbjct: 121  DRGLRESRAVDMESLCVLAGKLVWSIRIDLHIIDNGGNLIDAANIAALAALLTFRRPECS 180

Query: 588  LGGEDGQEVIVHPPEVEDPLPLIIHHLPIAVTFAFFGDGNIVVIDPSHNEEAVMGGRMTA 767
             GGEDGQE+IVHPPEV +PLPLI+HHLPIAVTFA  G+ NI+VIDP+H+EEAVMGGRMTA
Sbjct: 181  FGGEDGQELIVHPPEVREPLPLIVHHLPIAVTFAIIGNENIMVIDPTHSEEAVMGGRMTA 240

Query: 768  TLNTNGDVCAIQKAGGEGVMQSIIMQCLRIASVKAADITSKIKDAVEIYSTERAQRKIKR 947
            TLNTNGDVCAIQKAGGEG++QS+IMQCLRIASVKAADITSKIK+AVE ++TERA RKIKR
Sbjct: 241  TLNTNGDVCAIQKAGGEGIIQSVIMQCLRIASVKAADITSKIKNAVEAFNTERALRKIKR 300

Query: 948  HSSVVPMAMDVSVPDIKTKQQDHHTI-HTVLGDLSKHRMEEVTDEAGE 1088
            HSS +  A+DVS P  K ++  + ++   V+ +LS H ME +  E+ E
Sbjct: 301  HSSSI--AVDVSGPGAKMRENKNQSVDEKVVNELSSHHMERLKMESEE 346


>ref|XP_004139042.1| PREDICTED: exosome complex component RRP45-like [Cucumis sativus]
          Length = 452

 Score =  505 bits (1300), Expect = e-141
 Identities = 262/365 (71%), Positives = 293/365 (80%), Gaps = 4/365 (1%)
 Frame = +3

Query: 75   MEQRLGNTWKMSVNEKKFIETALLSDNRVDGRRPFDYRKLTIKFGKEDGSSEVQLGETHV 254
            MEQRL NTW++S NEKKFIETALLSD RVDGR PFDYR LTI FGK+DGSSEVQLG+THV
Sbjct: 1    MEQRLANTWRLSANEKKFIETALLSDLRVDGRGPFDYRNLTINFGKDDGSSEVQLGQTHV 60

Query: 255  MGFVTSQLVQPYRDRPNEGTLSIYTEFSPMADPSFEAGRPGESAVELGRIIDRGLRESRA 434
            MGFVT+QLVQPYRDRPNEGTLSIYTEFSPMADPSFE GRPGESAVELGR+IDRGLRESRA
Sbjct: 61   MGFVTAQLVQPYRDRPNEGTLSIYTEFSPMADPSFEPGRPGESAVELGRVIDRGLRESRA 120

Query: 435  VDTESLCVLAGKLVWSVRVDLHILDNGGNLVDAANVAALSALMTFRRPECTLGGEDGQEV 614
            VDTESLCV++GK VW++RVDLHILDNGGNLVDAANVAAL+AL TFRRPEC+L G+DGQEV
Sbjct: 121  VDTESLCVVSGKSVWAIRVDLHILDNGGNLVDAANVAALAALSTFRRPECSLSGDDGQEV 180

Query: 615  IVHPPEVEDPLPLIIHHLPIAVTFAFFGDGNIVVIDPSHNEEAVMGGRMTATLNTNGDVC 794
            IVHPPEV +PLPLIIHHLPIAVTFAFF   +I+VIDP+H EEAVMGGRMT TLN N DVC
Sbjct: 181  IVHPPEVREPLPLIIHHLPIAVTFAFFRSESILVIDPTHCEEAVMGGRMTVTLNANNDVC 240

Query: 795  AIQKAGGEGVMQSIIMQCLRIASVKAADITSKIKDAVEIYSTERAQRKIKRHSSVVPMAM 974
            AIQKAGGEGV++S+IMQCLRIASVKA DIT+KIK+AVE YS+ R  RKIKRH SV     
Sbjct: 241  AIQKAGGEGVLKSVIMQCLRIASVKAGDITTKIKNAVETYSSARQLRKIKRHPSV----- 295

Query: 975  DVSVPDIKTKQQDHHTIHTVLGDLSKHRMEEVTDEAGEXXXXXXXXXXXXD----NVKNY 1142
            ++ V       +D   I    G  S +  E V  ++G             D    + KN+
Sbjct: 296  NLDVGGGTGSLKDSQGISD--GQKSINDQESVVSQSGSIKNDASTNQGQLDKRDSDAKNF 353

Query: 1143 SGAPS 1157
             G PS
Sbjct: 354  IGGPS 358


>ref|XP_002531128.1| exosome complex exonuclease rrp45, putative [Ricinus communis]
            gi|223529292|gb|EEF31262.1| exosome complex exonuclease
            rrp45, putative [Ricinus communis]
          Length = 463

 Score =  501 bits (1289), Expect = e-139
 Identities = 247/332 (74%), Positives = 290/332 (87%)
 Frame = +3

Query: 75   MEQRLGNTWKMSVNEKKFIETALLSDNRVDGRRPFDYRKLTIKFGKEDGSSEVQLGETHV 254
            ME R+ +TW+MSVNEKKFIE+AL SD R+DGR   ++RKLTIKFG+EDGSSEVQLG+THV
Sbjct: 1    MEGRVASTWRMSVNEKKFIESALDSDLRIDGRNSHEFRKLTIKFGREDGSSEVQLGQTHV 60

Query: 255  MGFVTSQLVQPYRDRPNEGTLSIYTEFSPMADPSFEAGRPGESAVELGRIIDRGLRESRA 434
            MGFVTSQLVQPYRDRPNEG+LSI++EFSPMADPSFE GRPGESAVELGRIIDRGLRESRA
Sbjct: 61   MGFVTSQLVQPYRDRPNEGSLSIFSEFSPMADPSFEPGRPGESAVELGRIIDRGLRESRA 120

Query: 435  VDTESLCVLAGKLVWSVRVDLHILDNGGNLVDAANVAALSALMTFRRPECTLGGEDGQEV 614
            VDTESLCVLAGKLVW++R+DLHILDNGGNLVDAAN+AAL+AL+TFRRPECTLGGEDGQ+V
Sbjct: 121  VDTESLCVLAGKLVWAIRIDLHILDNGGNLVDAANIAALAALLTFRRPECTLGGEDGQQV 180

Query: 615  IVHPPEVEDPLPLIIHHLPIAVTFAFFGDGNIVVIDPSHNEEAVMGGRMTATLNTNGDVC 794
            IVHPPEV++PLPLI+HHLPIAVTFAFF   + +V+DP+HNEEAVM GRMT T+N NGD+C
Sbjct: 181  IVHPPEVKEPLPLIVHHLPIAVTFAFFSSEHTMVVDPTHNEEAVMTGRMTVTVNANGDIC 240

Query: 795  AIQKAGGEGVMQSIIMQCLRIASVKAADITSKIKDAVEIYSTERAQRKIKRHSSVVPMAM 974
            +IQKAGGEGVMQS IM CLR+AS  A  IT KIKDAVE Y+TERA RKIKRHS+ V  A+
Sbjct: 241  SIQKAGGEGVMQSRIMHCLRVASRNAESITKKIKDAVEAYNTERALRKIKRHSTSV--AV 298

Query: 975  DVSVPDIKTKQQDHHTIHTVLGDLSKHRMEEV 1070
            +VS      + ++   I   + ++S+H+ME +
Sbjct: 299  NVSTAIDVRELENKPFIQKGISEISRHQMERL 330


>ref|XP_004170431.1| PREDICTED: exosome complex component RRP45-like [Cucumis sativus]
          Length = 454

 Score =  499 bits (1284), Expect = e-139
 Identities = 262/367 (71%), Positives = 292/367 (79%), Gaps = 6/367 (1%)
 Frame = +3

Query: 75   MEQRLGNTWKMSVNEKKFIETALLSDNRVDGRRPFDYRKLTIKFGKEDGSSEVQLGETHV 254
            MEQRL NTW++S NEKKFIETALLSD RVDGR PFDYR LTI FGK+DGSSEVQLG+THV
Sbjct: 1    MEQRLANTWRLSANEKKFIETALLSDLRVDGRGPFDYRNLTINFGKDDGSSEVQLGQTHV 60

Query: 255  MGFVTSQLVQPYRDRPNEGTLSIYTEFSPMADPSFEAGRPGESAVELGRIIDRGLRESRA 434
            MGFVT+QLVQPYRDRPNEGTLSIYTEFSPMADPSFE GRPGESAVELGR+IDRGLRESRA
Sbjct: 61   MGFVTAQLVQPYRDRPNEGTLSIYTEFSPMADPSFEPGRPGESAVELGRVIDRGLRESRA 120

Query: 435  VDTESLCVLAGKLVWSVRVDLHILDNGGNLVDAANVAALSALMTFRRPECTLGGEDGQEV 614
            VDTESLCV++GK VW++RVDLHILDNGGNLVDAANVAAL+AL TFRRPEC+L G+DGQEV
Sbjct: 121  VDTESLCVVSGKSVWAIRVDLHILDNGGNLVDAANVAALAALSTFRRPECSLSGDDGQEV 180

Query: 615  IVHPPEVEDPLPLIIHHLPIAVTFAFFGDGNIVVIDPSHNEEAVMGGRMTATLNTNGDVC 794
            IVHPPEV +PLPLIIHHLPIAVTFAFF   +I+VIDP+H EEAVMGGRMT TLN N DVC
Sbjct: 181  IVHPPEVREPLPLIIHHLPIAVTFAFFRSESILVIDPTHCEEAVMGGRMTVTLNANNDVC 240

Query: 795  AIQKAGGEGVMQSIIMQCLRIASVKAADITSKIK--DAVEIYSTERAQRKIKRHSSVVPM 968
            AIQKAGGEGV++S+IMQCLRIASVKA DIT+KIK   AVE YS+ R  RKIKRH SV   
Sbjct: 241  AIQKAGGEGVLKSVIMQCLRIASVKAGDITTKIKMQAAVETYSSARQLRKIKRHPSV--- 297

Query: 969  AMDVSVPDIKTKQQDHHTIHTVLGDLSKHRMEEVTDEAGEXXXXXXXXXXXXD----NVK 1136
              ++ V       +D   I    G  S +  E V  ++G             D    + K
Sbjct: 298  --NLDVGGGTGSLKDSQGISD--GQKSINDQESVVSQSGSIKNDASTNQGQLDKRDVDAK 353

Query: 1137 NYSGAPS 1157
            N+ G PS
Sbjct: 354  NFIGGPS 360