BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00008446
         (1625 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002529802.1| geranyl geranyl pyrophosphate synthase, puta...   409   e-111
ref|XP_002312936.1| predicted protein [Populus trichocarpa] gi|2...   408   e-111
ref|XP_004144868.1| PREDICTED: heterodimeric geranylgeranyl pyro...   402   e-109
ref|XP_003631563.1| PREDICTED: geranylgeranyl pyrophosphate synt...   399   e-108
gb|AFK36520.1| unknown [Medicago truncatula]                          398   e-108

>ref|XP_002529802.1| geranyl geranyl pyrophosphate synthase, putative [Ricinus communis]
            gi|223530713|gb|EEF32584.1| geranyl geranyl pyrophosphate
            synthase, putative [Ricinus communis]
          Length = 345

 Score =  409 bits (1050), Expect = e-111
 Identities = 213/345 (61%), Positives = 259/345 (75%), Gaps = 3/345 (0%)
 Frame = +2

Query: 227  STITLNPSPHICNLHSKRPNLFHKNQ---PFRCSYSSISTPATMSLQTNFDLKTYWTSLI 397
            S+++ +P+P +  L  K PN+ H ++     +C   ++S  ++ S  T FDLKTYWT+LI
Sbjct: 5    SSVSSSPAPALY-LPRKTPNVHHLSKLGIRIQCCSPTVSV-SSQSKSTQFDLKTYWTTLI 62

Query: 398  TEINLKLDEAIPIKYPQQIYEAMRYSVLAPGAKRAAPIMCIASCELFGGSREAAFPTACA 577
             EIN KLD+AIP+++P+QIYEAMRYS LA GAKRA P+MC+A+CELFGG+R AAFPTACA
Sbjct: 63   AEINQKLDQAIPVQFPEQIYEAMRYSALAKGAKRAPPVMCVAACELFGGNRLAAFPTACA 122

Query: 578  LEMVHEASLIHDDLPYMDDDLFRRERLSNHAIFGVDMAILAGDALFPLGFQHIVSHTPPS 757
            LEMVH ASLIHDDLP MDDD  RR + SNH I+GVDMAILAGDALFPLG++HIVSHTP  
Sbjct: 123  LEMVHTASLIHDDLPCMDDDPSRRGQPSNHTIYGVDMAILAGDALFPLGYRHIVSHTPTG 182

Query: 758  LVPEARLLCVIAEIARAVGSTGMAAGQFLDLTIGEDASVEFVQEKKFGELSECSAACXXX 937
            LVPE RLL VIAEIARAVGSTGMAAGQFLDL  G  + VEF QEKK+GE+SECSA C   
Sbjct: 183  LVPEPRLLRVIAEIARAVGSTGMAAGQFLDLE-GGPSFVEFAQEKKYGEMSECSAVCGGL 241

Query: 938  XXXATDEEVEKLRRYGQTLGVLYQVVEDVLDMXXXXXXXXXXXXXXXXXSSFAKAFGVEK 1117
               A D+E+++LRRYG+ +GVLYQV++DVL+                   S+   +G+EK
Sbjct: 242  LAGAEDDEIQRLRRYGRAVGVLYQVIDDVLE---AKAMNKENEEKRRNGKSYVSLYGIEK 298

Query: 1118 AWEKAEELRIKAKRELDGFEKYGERVHPLISFVDYAVDRGFVIGE 1252
            A E AEELR +AK+ELDGF KYG+ V PL SFVDYA DRGF IGE
Sbjct: 299  AMEVAEELRTQAKKELDGFAKYGDSVMPLYSFVDYAADRGFTIGE 343


>ref|XP_002312936.1| predicted protein [Populus trichocarpa] gi|222849344|gb|EEE86891.1|
            predicted protein [Populus trichocarpa]
          Length = 314

 Score =  408 bits (1049), Expect = e-111
 Identities = 214/316 (67%), Positives = 241/316 (76%)
 Frame = +2

Query: 305  PFRCSYSSISTPATMSLQTNFDLKTYWTSLITEINLKLDEAIPIKYPQQIYEAMRYSVLA 484
            P +CS S     +T S    FDLKTYWT+LI EIN KLD+A+PI+YP +IYEAMRYSVLA
Sbjct: 3    PIQCSLSV----STHSKTPQFDLKTYWTTLILEINQKLDQAVPIQYPDKIYEAMRYSVLA 58

Query: 485  PGAKRAAPIMCIASCELFGGSREAAFPTACALEMVHEASLIHDDLPYMDDDLFRRERLSN 664
             GAKRA P+MC+A+CELFGG+R AAFPTACALEMVH ASLIHDDLP MDDD  RR + SN
Sbjct: 59   KGAKRAPPVMCVAACELFGGNRHAAFPTACALEMVHSASLIHDDLPCMDDDPSRRGQPSN 118

Query: 665  HAIFGVDMAILAGDALFPLGFQHIVSHTPPSLVPEARLLCVIAEIARAVGSTGMAAGQFL 844
            H I+GVDMAILAGDALFPLGF+HIVSHTP  LVPE RLL VIAEIARAVGSTGMAAGQFL
Sbjct: 119  HKIYGVDMAILAGDALFPLGFRHIVSHTPSDLVPEPRLLSVIAEIARAVGSTGMAAGQFL 178

Query: 845  DLTIGEDASVEFVQEKKFGELSECSAACXXXXXXATDEEVEKLRRYGQTLGVLYQVVEDV 1024
            DL  G + SVEFVQEKKFGE+ ECSA C      A D+E+++LRRYG+ +GVLYQVV+D+
Sbjct: 179  DLEGGPN-SVEFVQEKKFGEMGECSAVCGGLLAGAKDDEIQRLRRYGRAVGVLYQVVDDI 237

Query: 1025 LDMXXXXXXXXXXXXXXXXXSSFAKAFGVEKAWEKAEELRIKAKRELDGFEKYGERVHPL 1204
            L+                   S+   +GVEKA E AEELR KAK ELDGFEKYGE V PL
Sbjct: 238  LE-AKTMKSKVDEDKKKRKGKSYVALYGVEKAIEVAEELRAKAKEELDGFEKYGESVLPL 296

Query: 1205 ISFVDYAVDRGFVIGE 1252
             SFVDYA DRGF  GE
Sbjct: 297  YSFVDYAADRGFSFGE 312


>ref|XP_004144868.1| PREDICTED: heterodimeric geranylgeranyl pyrophosphate synthase small
            subunit, chloroplastic-like [Cucumis sativus]
            gi|449508802|ref|XP_004163415.1| PREDICTED: heterodimeric
            geranylgeranyl pyrophosphate synthase small subunit,
            chloroplastic-like [Cucumis sativus]
          Length = 335

 Score =  402 bits (1032), Expect = e-109
 Identities = 206/317 (64%), Positives = 240/317 (75%)
 Frame = +2

Query: 290  FHKNQPFRCSYSSISTPATMSLQTNFDLKTYWTSLITEINLKLDEAIPIKYPQQIYEAMR 469
            F +  P RCS SS    ++     +FDLKTYW  LI EIN KLDEA+P++YP QIYEAMR
Sbjct: 15   FQRKTPIRCSSSSSPALSSQPQSIHFDLKTYWKQLILEINQKLDEAVPLQYPDQIYEAMR 74

Query: 470  YSVLAPGAKRAAPIMCIASCELFGGSREAAFPTACALEMVHEASLIHDDLPYMDDDLFRR 649
            YSVLA GAKRA P+MC+A+CELFG  R AAFPTACALEMVHEASLIHDDLP MDDD  RR
Sbjct: 75   YSVLAQGAKRAPPVMCVAACELFGVDRLAAFPTACALEMVHEASLIHDDLPCMDDDPSRR 134

Query: 650  ERLSNHAIFGVDMAILAGDALFPLGFQHIVSHTPPSLVPEARLLCVIAEIARAVGSTGMA 829
             + SNH ++GVDMAILAGDALFPLGFQHIVSHTP  LVPE+RLL V+AEIARAVGS GMA
Sbjct: 135  GQPSNHTVYGVDMAILAGDALFPLGFQHIVSHTPFDLVPESRLLRVVAEIARAVGSRGMA 194

Query: 830  AGQFLDLTIGEDASVEFVQEKKFGELSECSAACXXXXXXATDEEVEKLRRYGQTLGVLYQ 1009
            AGQFLDL  G + SVEFVQEKKFGE+++CSA C      A D E+++LRRYG+ +GVLYQ
Sbjct: 195  AGQFLDLEGGPN-SVEFVQEKKFGEMAQCSAVCGGLLAGAEDHEIQRLRRYGRAVGVLYQ 253

Query: 1010 VVEDVLDMXXXXXXXXXXXXXXXXXSSFAKAFGVEKAWEKAEELRIKAKRELDGFEKYGE 1189
            VV+D+L+                   S+ + +G+EKA E AEELR KAK EL+GFEKYG+
Sbjct: 254  VVDDILE-EQSKKLDYTDESKRSKGKSYVEVYGIEKAKEVAEELRAKAKNELEGFEKYGD 312

Query: 1190 RVHPLISFVDYAVDRGF 1240
            +V PL SFVDYA DR F
Sbjct: 313  QVMPLYSFVDYAADRSF 329


>ref|XP_003631563.1| PREDICTED: geranylgeranyl pyrophosphate synthase-related protein,
            chloroplastic-like isoform 1 [Vitis vinifera]
          Length = 341

 Score =  399 bits (1025), Expect = e-108
 Identities = 210/338 (62%), Positives = 247/338 (73%), Gaps = 2/338 (0%)
 Frame = +2

Query: 251  PHICNLHSKRPNLFHKNQP--FRCSYSSISTPATMSLQTNFDLKTYWTSLITEINLKLDE 424
            P    LH + PN    N P   RC+  SIS   + S+Q  FDL++YWT+LI+EIN KL+E
Sbjct: 10   PSAARLHHRLPNRSSLNLPRTIRCTSPSISVSPSKSMQ--FDLRSYWTTLISEINTKLEE 67

Query: 425  AIPIKYPQQIYEAMRYSVLAPGAKRAAPIMCIASCELFGGSREAAFPTACALEMVHEASL 604
            AIP+KYPQQIYEAMRYSVLA G KRA P+MC+A CELFGG R AAFPTACALEMVH ASL
Sbjct: 68   AIPVKYPQQIYEAMRYSVLAKGGKRAPPVMCVAVCELFGGDRLAAFPTACALEMVHAASL 127

Query: 605  IHDDLPYMDDDLFRRERLSNHAIFGVDMAILAGDALFPLGFQHIVSHTPPSLVPEARLLC 784
            IHDDLP MDDD  RR + SNH ++GVDMAILAGDALFPLGF+HIVSHTP  LVPE +L+ 
Sbjct: 128  IHDDLPCMDDDPSRRGQPSNHTVYGVDMAILAGDALFPLGFRHIVSHTPSHLVPEGQLIR 187

Query: 785  VIAEIARAVGSTGMAAGQFLDLTIGEDASVEFVQEKKFGELSECSAACXXXXXXATDEEV 964
            VIAEIAR+VGSTGMAAGQFLDL  G   SV+FVQ KKFGE++ECSA C      A D+++
Sbjct: 188  VIAEIARSVGSTGMAAGQFLDLE-GAPNSVDFVQRKKFGEMAECSAVCGGFLGGAADDDI 246

Query: 965  EKLRRYGQTLGVLYQVVEDVLDMXXXXXXXXXXXXXXXXXSSFAKAFGVEKAWEKAEELR 1144
             +LRRYG+ +G+LYQVV+DVL                    S+   +G+EKA E AEELR
Sbjct: 247  LRLRRYGRAVGMLYQVVDDVL---KAKTKSEEDEEKKKKGKSYVDVYGMEKAMEVAEELR 303

Query: 1145 IKAKRELDGFEKYGERVHPLISFVDYAVDRGFVIGEHV 1258
             KAKREL GF+KYG+ V PL SFVD+A +RGF I   V
Sbjct: 304  AKAKRELSGFDKYGDSVVPLYSFVDFAAERGFTIDTSV 341


>gb|AFK36520.1| unknown [Medicago truncatula]
          Length = 342

 Score =  398 bits (1023), Expect = e-108
 Identities = 215/349 (61%), Positives = 262/349 (75%), Gaps = 3/349 (0%)
 Frame = +2

Query: 215  PFTISTITLNPSPHICNLHSKRPNLFHKNQPFRCSYSSISTPATMSLQT---NFDLKTYW 385
            PFTI+T+   PS +I     K PN   +  P RCS ++ S P+++S+++   +FDLKTYW
Sbjct: 3    PFTIATM---PSLNIGRFQ-KSPN---RILPIRCSMAAPS-PSSVSIRSKVVHFDLKTYW 54

Query: 386  TSLITEINLKLDEAIPIKYPQQIYEAMRYSVLAPGAKRAAPIMCIASCELFGGSREAAFP 565
            TSL+T+IN KLDEAI +++PQQIYEAMRYS LA GAKR+ P+MCI++CELFGGSR AAFP
Sbjct: 55   TSLMTQINQKLDEAIEVQFPQQIYEAMRYSALAKGAKRSPPVMCISACELFGGSRLAAFP 114

Query: 566  TACALEMVHEASLIHDDLPYMDDDLFRRERLSNHAIFGVDMAILAGDALFPLGFQHIVSH 745
            TACALEMVH ASLIHDDLP MDD L RR + SNH I+GVDMAILAGDALFPLGFQHIVSH
Sbjct: 115  TACALEMVHAASLIHDDLPCMDDSLSRRGQPSNHTIYGVDMAILAGDALFPLGFQHIVSH 174

Query: 746  TPPSLVPEARLLCVIAEIARAVGSTGMAAGQFLDLTIGEDASVEFVQEKKFGELSECSAA 925
            TP  LVPE R+L VIAEIAR VGSTGMAAGQFLDL  G +A V  +Q+KKFGE++ECSA 
Sbjct: 175  TPSDLVPEPRVLRVIAEIARCVGSTGMAAGQFLDLKGGPNA-VGLIQDKKFGEMAECSAV 233

Query: 926  CXXXXXXATDEEVEKLRRYGQTLGVLYQVVEDVLDMXXXXXXXXXXXXXXXXXSSFAKAF 1105
            C      A D+E+E+LRRYG+ +GVLY +V+D+L+                   S+ + +
Sbjct: 234  CGGLLAGAEDDEIERLRRYGRAVGVLYAIVDDILE---ERLKPEGDKDRENSGKSYVEVY 290

Query: 1106 GVEKAWEKAEELRIKAKRELDGFEKYGERVHPLISFVDYAVDRGFVIGE 1252
            GVEKA E AEELR KA  ELDGFEKYG++V PL SFV+YA+DR F + E
Sbjct: 291  GVEKAAEVAEELRAKALEELDGFEKYGDQVLPLYSFVNYAIDRSFNVDE 339