BLASTX nr result

ID: Cimicifuga21_contig00008414 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00008414
         (486 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002325793.1| predicted protein [Populus trichocarpa] gi|2...   222   3e-56
ref|XP_003631859.1| PREDICTED: translational activator GCN1 isof...   221   5e-56
ref|XP_002267871.2| PREDICTED: translational activator GCN1 isof...   221   5e-56
emb|CBI28651.3| unnamed protein product [Vitis vinifera]              221   5e-56
ref|XP_002522017.1| Translational activator GCN1, putative [Rici...   218   4e-55

>ref|XP_002325793.1| predicted protein [Populus trichocarpa] gi|222862668|gb|EEF00175.1|
           predicted protein [Populus trichocarpa]
          Length = 865

 Score =  222 bits (565), Expect = 3e-56
 Identities = 129/185 (69%), Positives = 135/185 (72%), Gaps = 30/185 (16%)
 Frame = -1

Query: 465 KLV*KLGERVLPLIT*Y----------SCVLGVCVGLSEVMASAGKNQLLTFMDELIPTI 316
           +LV KLGERVLPLI             S   GVC+GLSEVMASA K+QLL+FMDELIPTI
Sbjct: 147 ELVRKLGERVLPLIIPILSQGLKDPNPSRRQGVCIGLSEVMASAVKSQLLSFMDELIPTI 206

Query: 315 RTTLCDSTPEVRESAAQAFCTLYKSAGMQAIDEIVPTLLHALEDGETSDTALDGLKQI-- 142
           RT LCDS PEVRESA  AF TLYKSAGMQAIDEIVPTLLHALED ETSDTALDGLKQI  
Sbjct: 207 RTALCDSMPEVRESAGLAFSTLYKSAGMQAIDEIVPTLLHALEDDETSDTALDGLKQILS 266

Query: 141 ------------------LSAFNVHALGALAAVSGPGLNFHLGTILPALLSAMGGNDMDL 16
                             LSAFN HALGALA V+GPGLNFHLGTILPALLSAMG  D D+
Sbjct: 267 VRTTAVLPHILPKLVHLPLSAFNAHALGALAEVAGPGLNFHLGTILPALLSAMGAEDKDV 326

Query: 15  QQLAK 1
           Q LAK
Sbjct: 327 QTLAK 331


>ref|XP_003631859.1| PREDICTED: translational activator GCN1 isoform 2 [Vitis vinifera]
          Length = 2461

 Score =  221 bits (563), Expect = 5e-56
 Identities = 126/185 (68%), Positives = 137/185 (74%), Gaps = 30/185 (16%)
 Frame = -1

Query: 465  KLV*KLGERVLPLIT*Y----------SCVLGVCVGLSEVMASAGKNQLLTFMDELIPTI 316
            +LV KLGERVLPLI             S   GVC+GLSEVMASAGK+QLL+FMDELIPTI
Sbjct: 1743 ELVRKLGERVLPLIIPILAQGLKDPKTSRRQGVCIGLSEVMASAGKSQLLSFMDELIPTI 1802

Query: 315  RTTLCDSTPEVRESAAQAFCTLYKSAGMQAIDEIVPTLLHALEDGETSDTALDGLKQILS 136
            RT LCDSTPEVRESA  AF TLYKSAGMQAIDEIVPTLLH+LED +TSDTALDGLKQILS
Sbjct: 1803 RTALCDSTPEVRESAGLAFSTLYKSAGMQAIDEIVPTLLHSLEDDQTSDTALDGLKQILS 1862

Query: 135  --------------------AFNVHALGALAAVSGPGLNFHLGTILPALLSAMGGNDMDL 16
                                AFN HALGALA V+GPGLNFHLG +LPALLSAM  +D D+
Sbjct: 1863 VRTTAVLPHILPKLVHLPLTAFNAHALGALAEVAGPGLNFHLGIVLPALLSAMSDDDTDV 1922

Query: 15   QQLAK 1
            Q+LAK
Sbjct: 1923 QKLAK 1927


>ref|XP_002267871.2| PREDICTED: translational activator GCN1 isoform 1 [Vitis vinifera]
          Length = 2613

 Score =  221 bits (563), Expect = 5e-56
 Identities = 126/185 (68%), Positives = 137/185 (74%), Gaps = 30/185 (16%)
 Frame = -1

Query: 465  KLV*KLGERVLPLIT*Y----------SCVLGVCVGLSEVMASAGKNQLLTFMDELIPTI 316
            +LV KLGERVLPLI             S   GVC+GLSEVMASAGK+QLL+FMDELIPTI
Sbjct: 1895 ELVRKLGERVLPLIIPILAQGLKDPKTSRRQGVCIGLSEVMASAGKSQLLSFMDELIPTI 1954

Query: 315  RTTLCDSTPEVRESAAQAFCTLYKSAGMQAIDEIVPTLLHALEDGETSDTALDGLKQILS 136
            RT LCDSTPEVRESA  AF TLYKSAGMQAIDEIVPTLLH+LED +TSDTALDGLKQILS
Sbjct: 1955 RTALCDSTPEVRESAGLAFSTLYKSAGMQAIDEIVPTLLHSLEDDQTSDTALDGLKQILS 2014

Query: 135  --------------------AFNVHALGALAAVSGPGLNFHLGTILPALLSAMGGNDMDL 16
                                AFN HALGALA V+GPGLNFHLG +LPALLSAM  +D D+
Sbjct: 2015 VRTTAVLPHILPKLVHLPLTAFNAHALGALAEVAGPGLNFHLGIVLPALLSAMSDDDTDV 2074

Query: 15   QQLAK 1
            Q+LAK
Sbjct: 2075 QKLAK 2079


>emb|CBI28651.3| unnamed protein product [Vitis vinifera]
          Length = 2636

 Score =  221 bits (563), Expect = 5e-56
 Identities = 126/185 (68%), Positives = 137/185 (74%), Gaps = 30/185 (16%)
 Frame = -1

Query: 465  KLV*KLGERVLPLIT*Y----------SCVLGVCVGLSEVMASAGKNQLLTFMDELIPTI 316
            +LV KLGERVLPLI             S   GVC+GLSEVMASAGK+QLL+FMDELIPTI
Sbjct: 1918 ELVRKLGERVLPLIIPILAQGLKDPKTSRRQGVCIGLSEVMASAGKSQLLSFMDELIPTI 1977

Query: 315  RTTLCDSTPEVRESAAQAFCTLYKSAGMQAIDEIVPTLLHALEDGETSDTALDGLKQILS 136
            RT LCDSTPEVRESA  AF TLYKSAGMQAIDEIVPTLLH+LED +TSDTALDGLKQILS
Sbjct: 1978 RTALCDSTPEVRESAGLAFSTLYKSAGMQAIDEIVPTLLHSLEDDQTSDTALDGLKQILS 2037

Query: 135  --------------------AFNVHALGALAAVSGPGLNFHLGTILPALLSAMGGNDMDL 16
                                AFN HALGALA V+GPGLNFHLG +LPALLSAM  +D D+
Sbjct: 2038 VRTTAVLPHILPKLVHLPLTAFNAHALGALAEVAGPGLNFHLGIVLPALLSAMSDDDTDV 2097

Query: 15   QQLAK 1
            Q+LAK
Sbjct: 2098 QKLAK 2102


>ref|XP_002522017.1| Translational activator GCN1, putative [Ricinus communis]
            gi|223538821|gb|EEF40421.1| Translational activator GCN1,
            putative [Ricinus communis]
          Length = 2459

 Score =  218 bits (555), Expect = 4e-55
 Identities = 127/185 (68%), Positives = 133/185 (71%), Gaps = 30/185 (16%)
 Frame = -1

Query: 465  KLV*KLGERVLPLIT*Y----------SCVLGVCVGLSEVMASAGKNQLLTFMDELIPTI 316
            +LV KLGERVLPLI             S   GVC+GLSEVMASAGK+QLL FMDELIPTI
Sbjct: 1741 ELVRKLGERVLPLIIPILSQGLRNPDASRRQGVCIGLSEVMASAGKSQLLNFMDELIPTI 1800

Query: 315  RTTLCDSTPEVRESAAQAFCTLYKSAGMQAIDEIVPTLLHALEDGETSDTALDGLKQI-- 142
            RT LCDS  EVRESA  AF TLYKSAGMQAIDEIVPTLLHALED ETSDTALDGLKQI  
Sbjct: 1801 RTALCDSMLEVRESAGLAFSTLYKSAGMQAIDEIVPTLLHALEDDETSDTALDGLKQILS 1860

Query: 141  ------------------LSAFNVHALGALAAVSGPGLNFHLGTILPALLSAMGGNDMDL 16
                              LSAFN HALGALA V+GPGLN HL T+LPALLSAMGG D D+
Sbjct: 1861 VRTAAVLPHILPKLVHLPLSAFNAHALGALAEVAGPGLNVHLSTVLPALLSAMGGEDKDV 1920

Query: 15   QQLAK 1
            Q LAK
Sbjct: 1921 QTLAK 1925


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