BLASTX nr result

ID: Cimicifuga21_contig00008397 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00008397
         (342 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAV74397.1| geranylgeranyl diphosphate synthase [Adonis aesti...    60   1e-07

>gb|AAV74397.1| geranylgeranyl diphosphate synthase [Adonis aestivalis var.
           palaestina]
          Length = 359

 Score = 60.5 bits (145), Expect = 1e-07
 Identities = 38/108 (35%), Positives = 57/108 (52%), Gaps = 4/108 (3%)
 Frame = +3

Query: 30  MACFAPLCPYDNXXXXXXXXXXXXNTTSHLKLYTYRLKGSPTF----RRRALSHLKLDSI 197
           MA FA LCP+++                    +T++LK  PT     +   +SH     +
Sbjct: 1   MASFASLCPHES--------------------FTHQLKRLPTLSPPLKLTRVSHSHRRML 40

Query: 198 RFEESPIVPSAAPQTLISQGLITETQSYMETGFQFRDYMATMAKKVNQ 341
           +F      PSAA +  +++G+I ETQSY E+ FQF +YMA MA++VNQ
Sbjct: 41  QF------PSAAMKATVTKGMIAETQSYKESAFQFEEYMAEMAERVNQ 82


Top