BLASTX nr result

ID: Cimicifuga21_contig00008395 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00008395
         (282 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAV74397.1| geranylgeranyl diphosphate synthase [Adonis aesti...   148   5e-34
ref|XP_002302978.1| predicted protein [Populus trichocarpa] gi|2...   144   1e-32
ref|XP_002305196.1| predicted protein [Populus trichocarpa] gi|2...   140   1e-31
ref|XP_002869021.1| hypothetical protein ARALYDRAFT_490952 [Arab...   139   2e-31
ref|XP_002302977.1| predicted protein [Populus trichocarpa] gi|2...   139   3e-31

>gb|AAV74397.1| geranylgeranyl diphosphate synthase [Adonis aestivalis var.
           palaestina]
          Length = 359

 Score =  148 bits (373), Expect = 5e-34
 Identities = 69/94 (73%), Positives = 79/94 (84%)
 Frame = -1

Query: 282 MAKKVNQVLDQAVPLRHPLNVREAMRYSLLAGGKRVMPILCLASCALVGGDEEHAYPVAC 103
           MA++VNQ LD +VPLRHPL + EAMRYSLLAGGKRV PILC+ASC LVGGD   A+P+AC
Sbjct: 76  MAERVNQALDDSVPLRHPLKIHEAMRYSLLAGGKRVRPILCIASCELVGGDPVAAHPIAC 135

Query: 102 ALEMLHTMSLIHDDLPIMDDGDLRCGMVSNHKVF 1
           ALEM+HTMSLIHDDLP MD+ D R GM +NHK F
Sbjct: 136 ALEMIHTMSLIHDDLPCMDNDDFRRGMPTNHKAF 169


>ref|XP_002302978.1| predicted protein [Populus trichocarpa] gi|222844704|gb|EEE82251.1|
           predicted protein [Populus trichocarpa]
          Length = 287

 Score =  144 bits (362), Expect = 1e-32
 Identities = 68/91 (74%), Positives = 78/91 (85%)
 Frame = -1

Query: 273 KVNQVLDQAVPLRHPLNVREAMRYSLLAGGKRVMPILCLASCALVGGDEEHAYPVACALE 94
           +VN+ LD+AVPL+HP  + EAMRYSLLAGGKRV PILC+ASC LVGGDEE A P ACALE
Sbjct: 7   QVNKALDEAVPLQHPRKIHEAMRYSLLAGGKRVRPILCIASCELVGGDEELAMPTACALE 66

Query: 93  MLHTMSLIHDDLPIMDDGDLRCGMVSNHKVF 1
           M+HTMSLIHDDLP MD+ DLR GM ++HKVF
Sbjct: 67  MIHTMSLIHDDLPCMDNDDLRRGMPTSHKVF 97


>ref|XP_002305196.1| predicted protein [Populus trichocarpa] gi|222848160|gb|EEE85707.1|
           predicted protein [Populus trichocarpa]
          Length = 365

 Score =  140 bits (352), Expect = 1e-31
 Identities = 66/93 (70%), Positives = 77/93 (82%)
 Frame = -1

Query: 279 AKKVNQVLDQAVPLRHPLNVREAMRYSLLAGGKRVMPILCLASCALVGGDEEHAYPVACA 100
           A +VN+ LD+AVPL+HP  + EAMRYSLLAGGKRV PILC+ASC LVGGDE  A P ACA
Sbjct: 83  ANQVNKALDEAVPLQHPQKINEAMRYSLLAGGKRVRPILCIASCELVGGDEGLAMPAACA 142

Query: 99  LEMLHTMSLIHDDLPIMDDGDLRCGMVSNHKVF 1
           LEM+HTMSLIHDDLP MD+ DLR G  ++HK+F
Sbjct: 143 LEMIHTMSLIHDDLPCMDNDDLRRGKPTSHKIF 175


>ref|XP_002869021.1| hypothetical protein ARALYDRAFT_490952 [Arabidopsis lyrata subsp.
           lyrata] gi|297314857|gb|EFH45280.1| hypothetical protein
           ARALYDRAFT_490952 [Arabidopsis lyrata subsp. lyrata]
          Length = 379

 Score =  139 bits (350), Expect = 2e-31
 Identities = 65/93 (69%), Positives = 76/93 (81%)
 Frame = -1

Query: 279 AKKVNQVLDQAVPLRHPLNVREAMRYSLLAGGKRVMPILCLASCALVGGDEEHAYPVACA 100
           A+ VN+ LD AVPLR PL + EAMRYSLLAGGKRV P+LC+A+C LVGG+E  A P ACA
Sbjct: 92  AESVNKALDSAVPLREPLKIHEAMRYSLLAGGKRVRPVLCIAACELVGGEESTAMPAACA 151

Query: 99  LEMLHTMSLIHDDLPIMDDGDLRCGMVSNHKVF 1
           +EM+HTMSLIHDDLP MD+ DLR G  +NHKVF
Sbjct: 152 VEMIHTMSLIHDDLPCMDNDDLRRGKPTNHKVF 184


>ref|XP_002302977.1| predicted protein [Populus trichocarpa] gi|222844703|gb|EEE82250.1|
           predicted protein [Populus trichocarpa]
          Length = 314

 Score =  139 bits (349), Expect = 3e-31
 Identities = 64/92 (69%), Positives = 77/92 (83%)
 Frame = -1

Query: 276 KKVNQVLDQAVPLRHPLNVREAMRYSLLAGGKRVMPILCLASCALVGGDEEHAYPVACAL 97
           K+VN+ L++AVPL+HP+ + EAMRYSLL  GKR+ PILC+ASC LVGGDEE A P+ACAL
Sbjct: 33  KQVNEALEEAVPLQHPIKIHEAMRYSLLGNGKRMCPILCIASCELVGGDEELAMPLACAL 92

Query: 96  EMLHTMSLIHDDLPIMDDGDLRCGMVSNHKVF 1
           EM+H MSLIHDDLP MD+ DLR G  +NHKVF
Sbjct: 93  EMVHAMSLIHDDLPCMDNDDLRRGKPTNHKVF 124


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