BLASTX nr result

ID: Cimicifuga21_contig00008391 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00008391
         (1318 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002305651.1| f-box family protein [Populus trichocarpa] g...   531   e-148
ref|XP_002316664.1| f-box family protein [Populus trichocarpa] g...   522   e-146
ref|XP_002524686.1| TRANSPORT INHIBITOR RESPONSE 1 protein, puta...   520   e-145
ref|XP_002271412.2| PREDICTED: protein TRANSPORT INHIBITOR RESPO...   516   e-144
emb|CBI23303.3| unnamed protein product [Vitis vinifera]              516   e-144

>ref|XP_002305651.1| f-box family protein [Populus trichocarpa]
            gi|222848615|gb|EEE86162.1| f-box family protein [Populus
            trichocarpa]
          Length = 579

 Score =  531 bits (1369), Expect = e-148
 Identities = 264/334 (79%), Positives = 295/334 (88%), Gaps = 1/334 (0%)
 Frame = +3

Query: 3    TGSFSQELTAQEFAELANAFCSCKNLHSLSGLWHATSSSFPVLYKACSNLTFLNLSYAAL 182
            TGSF+ ELT +++AEL +AF  CKNLH+LSGLW AT+   PVLY  CSNLTFLNLSY  L
Sbjct: 247  TGSFTPELTTRQYAELESAFNQCKNLHTLSGLWEATALYLPVLYPVCSNLTFLNLSYTFL 306

Query: 183  GSEDLASLLSNCANLHRLWVLDTVEDEGLEAVGSSCHMLEELRVFPADPFDQDIVLQGGG 362
             S +LASLL  C  L RLWVLDTV D+GLEAVGS+C +LEELRVFPADPFD++I+     
Sbjct: 307  QSLELASLLRQCPRLRRLWVLDTVGDKGLEAVGSNCPLLEELRVFPADPFDEEII----H 362

Query: 363  GVTEAGLVAVSRGCCNLRYVLYFCRQMTNDAVATVVQNCPGFTHFRLCIMNPCQPDYLTN 542
            GVTEAG VAVS GC  L YVLYFCRQMTN AVAT+VQNCP FTHFRLCIMNP QPDYLTN
Sbjct: 363  GVTEAGFVAVSYGCRRLHYVLYFCRQMTNAAVATIVQNCPDFTHFRLCIMNPGQPDYLTN 422

Query: 543  EPMDEAFGAVVKTCTKLKRLSVSGLLTDLTFEYVGKYAKNLEILSVAFAGNSDRGMQYVL 722
            EPMDEAFGAVV+TCTKL+RLSVSGLLTDLTFEY+G+YAKNLE LSVAFAG+SDRGMQ VL
Sbjct: 423  EPMDEAFGAVVRTCTKLQRLSVSGLLTDLTFEYIGQYAKNLETLSVAFAGSSDRGMQCVL 482

Query: 723  EGCPKLRKLEIRDCPFGDAALLSGLERYESMRSLWMSACNVTMNGCRLLAKEMPRLNVEV 902
            EGCPKLRKLEIRDCPFG+AALLSGLE+YESMRSLWMSACNVTMNGCRLLA+EMPRLNVEV
Sbjct: 483  EGCPKLRKLEIRDCPFGNAALLSGLEKYESMRSLWMSACNVTMNGCRLLAREMPRLNVEV 542

Query: 903  IEEE-NDDTRAEKVYVYRSVAGPRKDAPPFVLTL 1001
            ++E+ +DD++A+KVYVYRSVAGPR+DAPP VLTL
Sbjct: 543  MKEDGSDDSQADKVYVYRSVAGPRRDAPPCVLTL 576


>ref|XP_002316664.1| f-box family protein [Populus trichocarpa]
            gi|222859729|gb|EEE97276.1| f-box family protein [Populus
            trichocarpa]
          Length = 579

 Score =  522 bits (1344), Expect = e-146
 Identities = 258/334 (77%), Positives = 295/334 (88%), Gaps = 1/334 (0%)
 Frame = +3

Query: 3    TGSFSQELTAQEFAELANAFCSCKNLHSLSGLWHATSSSFPVLYKACSNLTFLNLSYAAL 182
            TGSF  ELTA+++AEL ++F   KNL++LSGLW AT+   PVLY AC+NLTFLNLSYA L
Sbjct: 247  TGSFMPELTARQYAELGSSFNQLKNLNTLSGLWEATAPYLPVLYPACTNLTFLNLSYAFL 306

Query: 183  GSEDLASLLSNCANLHRLWVLDTVEDEGLEAVGSSCHMLEELRVFPADPFDQDIVLQGGG 362
             S +LASLL  C  L RLWVLDTV D+GLEAVGS+C +LEELRVFPADPFD++++     
Sbjct: 307  QSIELASLLCQCPRLRRLWVLDTVGDKGLEAVGSNCPLLEELRVFPADPFDEEVI----H 362

Query: 363  GVTEAGLVAVSRGCCNLRYVLYFCRQMTNDAVATVVQNCPGFTHFRLCIMNPCQPDYLTN 542
            GVTEAG +AVS GC  L YVLYFCRQMTN AVAT+VQNCP FTHFRLCIMNP QPDYLTN
Sbjct: 363  GVTEAGFLAVSYGCRRLHYVLYFCRQMTNAAVATIVQNCPDFTHFRLCIMNPGQPDYLTN 422

Query: 543  EPMDEAFGAVVKTCTKLKRLSVSGLLTDLTFEYVGKYAKNLEILSVAFAGNSDRGMQYVL 722
            EPMDEAFGAVV+TCTKL+RLSVSGLLTDLTFEY+G+YAKNLE LSVAFAG+SDRGMQ +L
Sbjct: 423  EPMDEAFGAVVRTCTKLQRLSVSGLLTDLTFEYIGQYAKNLETLSVAFAGSSDRGMQCML 482

Query: 723  EGCPKLRKLEIRDCPFGDAALLSGLERYESMRSLWMSACNVTMNGCRLLAKEMPRLNVEV 902
            EGCPKLRKLEIRDCPFG+AALLSGLE+YESMRSLWMSACNVTMNGCR+LA+EMPRLNVEV
Sbjct: 483  EGCPKLRKLEIRDCPFGNAALLSGLEKYESMRSLWMSACNVTMNGCRVLAREMPRLNVEV 542

Query: 903  IEEE-NDDTRAEKVYVYRSVAGPRKDAPPFVLTL 1001
            ++E+ +DD++A+KVYVYRSV GPR+DAPP VLTL
Sbjct: 543  MKEDGSDDSQADKVYVYRSVVGPRRDAPPCVLTL 576


>ref|XP_002524686.1| TRANSPORT INHIBITOR RESPONSE 1 protein, putative [Ricinus communis]
            gi|223536047|gb|EEF37705.1| TRANSPORT INHIBITOR RESPONSE
            1 protein, putative [Ricinus communis]
          Length = 589

 Score =  520 bits (1339), Expect = e-145
 Identities = 257/334 (76%), Positives = 293/334 (87%), Gaps = 1/334 (0%)
 Frame = +3

Query: 3    TGSFSQELTAQEFAELANAFCSCKNLHSLSGLWHATSSSFPVLYKACSNLTFLNLSYAAL 182
            TGSFSQELTA++F E+ N F  CKNL +LSGLW A +   PVLY AC+NLTFLNLSYAAL
Sbjct: 257  TGSFSQELTARQFTEVENTFSHCKNLDTLSGLWEAMAPYLPVLYPACTNLTFLNLSYAAL 316

Query: 183  GSEDLASLLSNCANLHRLWVLDTVEDEGLEAVGSSCHMLEELRVFPADPFDQDIVLQGGG 362
             S +LA+LL +C  L RLWVLDT+ED+GLE+VGS+C +LEELRVFPADPF+++I+     
Sbjct: 317  QSLELANLLRHCPQLRRLWVLDTIEDKGLESVGSNCPLLEELRVFPADPFEEEII----H 372

Query: 363  GVTEAGLVAVSRGCCNLRYVLYFCRQMTNDAVATVVQNCPGFTHFRLCIMNPCQPDYLTN 542
            GVTEAG VAVS GC  L YVLYFCRQMTN AVAT+VQNCP FTHFRLCIMNP QPDY TN
Sbjct: 373  GVTEAGFVAVSYGCRRLHYVLYFCRQMTNAAVATIVQNCPNFTHFRLCIMNPRQPDYTTN 432

Query: 543  EPMDEAFGAVVKTCTKLKRLSVSGLLTDLTFEYVGKYAKNLEILSVAFAGNSDRGMQYVL 722
            +PMDEAFGAVVKTCTKL+RLSVSGLLTDLTFEY+G+YAKNLE LSVAFAG+SD GMQ VL
Sbjct: 433  KPMDEAFGAVVKTCTKLQRLSVSGLLTDLTFEYIGRYAKNLETLSVAFAGSSDWGMQCVL 492

Query: 723  EGCPKLRKLEIRDCPFGDAALLSGLERYESMRSLWMSACNVTMNGCRLLAKEMPRLNVEV 902
             GCPKLRKLEIRDCPFG+AALLSGLE+YESMRSLWMS+CNVTMNGCRLLA+EMPRLNVEV
Sbjct: 493  GGCPKLRKLEIRDCPFGNAALLSGLEKYESMRSLWMSSCNVTMNGCRLLAREMPRLNVEV 552

Query: 903  IEEE-NDDTRAEKVYVYRSVAGPRKDAPPFVLTL 1001
            ++E+ +DD++A+KVYVYRSVAGPR+DAP  VL L
Sbjct: 553  MKEDGSDDSQADKVYVYRSVAGPRRDAPSTVLNL 586


>ref|XP_002271412.2| PREDICTED: protein TRANSPORT INHIBITOR RESPONSE 1 [Vitis vinifera]
          Length = 583

 Score =  516 bits (1328), Expect = e-144
 Identities = 257/334 (76%), Positives = 290/334 (86%), Gaps = 1/334 (0%)
 Frame = +3

Query: 3    TGSFSQELTAQEFAELANAFCSCKNLHSLSGLWHATSSSFPVLYKACSNLTFLNLSYAAL 182
            TGSF QELT +++AEL +AF +CKNL++LSGLW AT    PVLY AC NLTFLNLS AAL
Sbjct: 254  TGSFHQELTTRQYAELESAFNNCKNLNTLSGLWEATPLYLPVLYPACMNLTFLNLSDAAL 313

Query: 183  GSEDLASLLSNCANLHRLWVLDTVEDEGLEAVGSSCHMLEELRVFPADPFDQDIVLQGGG 362
             S +LA LL+ C NL RLWVLDTVED+GLEAVG SC +LEELRVFPADP++QD+V     
Sbjct: 314  QSGELAKLLARCPNLQRLWVLDTVEDKGLEAVGLSCPLLEELRVFPADPYEQDVV----H 369

Query: 363  GVTEAGLVAVSRGCCNLRYVLYFCRQMTNDAVATVVQNCPGFTHFRLCIMNPCQPDYLTN 542
            GVTE G VAVS GC  L YVLYFCRQMTN AVAT+V+NCP FTHFRLC+MNP +PDYLT+
Sbjct: 370  GVTEMGFVAVSYGCPRLHYVLYFCRQMTNAAVATIVKNCPDFTHFRLCVMNPGEPDYLTD 429

Query: 543  EPMDEAFGAVVKTCTKLKRLSVSGLLTDLTFEYVGKYAKNLEILSVAFAGNSDRGMQYVL 722
            EPMDEAFGAVVK CTKL+RL+VSGLLTDLTFEY+GKYAKNLE LSVAFAG+SD GMQ VL
Sbjct: 430  EPMDEAFGAVVKNCTKLQRLAVSGLLTDLTFEYIGKYAKNLETLSVAFAGSSDWGMQCVL 489

Query: 723  EGCPKLRKLEIRDCPFGDAALLSGLERYESMRSLWMSACNVTMNGCRLLAKEMPRLNVEV 902
             GC KLRKLEIRDCPFG+ ALLSGLE+YESMRSLWMSACNVTMN CR LAK+MPRLNVEV
Sbjct: 490  SGCSKLRKLEIRDCPFGNEALLSGLEKYESMRSLWMSACNVTMNACRRLAKQMPRLNVEV 549

Query: 903  I-EEENDDTRAEKVYVYRSVAGPRKDAPPFVLTL 1001
            + +EE+DD++A+KVYVYRSVAGPR+DAPPFVLTL
Sbjct: 550  MKDEESDDSQADKVYVYRSVAGPRRDAPPFVLTL 583


>emb|CBI23303.3| unnamed protein product [Vitis vinifera]
          Length = 553

 Score =  516 bits (1328), Expect = e-144
 Identities = 257/334 (76%), Positives = 290/334 (86%), Gaps = 1/334 (0%)
 Frame = +3

Query: 3    TGSFSQELTAQEFAELANAFCSCKNLHSLSGLWHATSSSFPVLYKACSNLTFLNLSYAAL 182
            TGSF QELT +++AEL +AF +CKNL++LSGLW AT    PVLY AC NLTFLNLS AAL
Sbjct: 224  TGSFHQELTTRQYAELESAFNNCKNLNTLSGLWEATPLYLPVLYPACMNLTFLNLSDAAL 283

Query: 183  GSEDLASLLSNCANLHRLWVLDTVEDEGLEAVGSSCHMLEELRVFPADPFDQDIVLQGGG 362
             S +LA LL+ C NL RLWVLDTVED+GLEAVG SC +LEELRVFPADP++QD+V     
Sbjct: 284  QSGELAKLLARCPNLQRLWVLDTVEDKGLEAVGLSCPLLEELRVFPADPYEQDVV----H 339

Query: 363  GVTEAGLVAVSRGCCNLRYVLYFCRQMTNDAVATVVQNCPGFTHFRLCIMNPCQPDYLTN 542
            GVTE G VAVS GC  L YVLYFCRQMTN AVAT+V+NCP FTHFRLC+MNP +PDYLT+
Sbjct: 340  GVTEMGFVAVSYGCPRLHYVLYFCRQMTNAAVATIVKNCPDFTHFRLCVMNPGEPDYLTD 399

Query: 543  EPMDEAFGAVVKTCTKLKRLSVSGLLTDLTFEYVGKYAKNLEILSVAFAGNSDRGMQYVL 722
            EPMDEAFGAVVK CTKL+RL+VSGLLTDLTFEY+GKYAKNLE LSVAFAG+SD GMQ VL
Sbjct: 400  EPMDEAFGAVVKNCTKLQRLAVSGLLTDLTFEYIGKYAKNLETLSVAFAGSSDWGMQCVL 459

Query: 723  EGCPKLRKLEIRDCPFGDAALLSGLERYESMRSLWMSACNVTMNGCRLLAKEMPRLNVEV 902
             GC KLRKLEIRDCPFG+ ALLSGLE+YESMRSLWMSACNVTMN CR LAK+MPRLNVEV
Sbjct: 460  SGCSKLRKLEIRDCPFGNEALLSGLEKYESMRSLWMSACNVTMNACRRLAKQMPRLNVEV 519

Query: 903  I-EEENDDTRAEKVYVYRSVAGPRKDAPPFVLTL 1001
            + +EE+DD++A+KVYVYRSVAGPR+DAPPFVLTL
Sbjct: 520  MKDEESDDSQADKVYVYRSVAGPRRDAPPFVLTL 553


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