BLASTX nr result
ID: Cimicifuga21_contig00008389
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Cimicifuga21_contig00008389
(1597 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002284795.1| PREDICTED: F-box protein SKIP23-like [Vitis ... 139 7e-34
emb|CAN69116.1| hypothetical protein VITISV_031843 [Vitis vinifera] 138 2e-33
emb|CAN67605.1| hypothetical protein VITISV_030993 [Vitis vinifera] 140 9e-31
ref|XP_002510618.1| ubiquitin-protein ligase, putative [Ricinus ... 133 2e-30
ref|XP_002300674.1| predicted protein [Populus trichocarpa] gi|2... 124 3e-28
>ref|XP_002284795.1| PREDICTED: F-box protein SKIP23-like [Vitis vinifera]
Length = 389
Score = 139 bits (351), Expect(2) = 7e-34
Identities = 110/367 (29%), Positives = 167/367 (45%), Gaps = 18/367 (4%)
Frame = +3
Query: 99 SQLPDELWSIIGCKLDLAADRFRFRSVCKSWRSXXXXXXXXXXXXXAXXXXXXXXXXXXX 278
SQL EL I K + D RFR+VC +WR+
Sbjct: 5 SQLHPELLDFIAKKFKIYTDYVRFRAVCHNWRASVPKTPHHLPTQLPWLMLPQSQPHHT- 63
Query: 279 XXXXXXXXXXHRGFVGIGEQEVYELDLPEA-HQTRCVGSTGNWLITVGLDTIIRLLNPFT 455
HR F + + + L LPEA H+ R GS+ WL+ + I LLNP T
Sbjct: 64 ----------HRPFFSLSLNKFHFLQLPEASHRRRRRGSSHGWLLILDEAPEIFLLNPLT 113
Query: 456 RVQIDLPSQSTF-------------EYG-STIMSDGVEMAPEDCRDNLVRKVIVXXXXXX 593
R ++ LP STF EY T D + + RD+ ++K I+
Sbjct: 114 RSKVHLPPLSTFPNVVRFNFADVGREYALRTSSGDVYTRSLKKMRDSFIKKTILSSSPAN 173
Query: 594 XXXXXXDCIAMAIHHYWKKLAIARPGDPSWITVQTPKNFVEDIIFYKEQFYAVNYHGVVM 773
D IA+ I + LA+ R D SW ++ +++ ED+IF++ FYAVN +G +
Sbjct: 174 GS----DFIAVVILNQTGDLALCRKSDDSWTFLEDAQSYAEDVIFHRGLFYAVNKYGSIA 229
Query: 774 VCDI-GAFPKASV--LTEQFQRVSLSEKKYXXXXXXXXXXXIKFVEDLYXXXXXXEYTEA 944
VCD+ G+ P+ S+ + +QF + +Y ++++ Y E
Sbjct: 230 VCDVSGSSPRVSIIEMPQQFG----GDLQYLVESGEELLLVTRYLDLTYD-------VEP 278
Query: 945 KKKGLPLYKTENFKVYKLDFANKKWNELSDLGDYCLFLGFNTSVSLLALNHPGSLKKNSI 1124
+ L +Y+T F+V +LD +W +S LGD LFLG N S+SL +++ PG K N I
Sbjct: 279 DQTSL-IYRTTRFQVCRLDLKAPRWEVVSSLGDRALFLGENLSLSLSSVDFPG-CKGNCI 336
Query: 1125 YFTDDYT 1145
Y+TDDY+
Sbjct: 337 YYTDDYS 343
Score = 32.3 bits (72), Expect(2) = 7e-34
Identities = 14/33 (42%), Positives = 19/33 (57%)
Frame = +2
Query: 1223 MGVFDLEDKSIRPHYKGISTSFFSPPLWIVPTP 1321
+G+F+LED SI P + PPLW+ P P
Sbjct: 356 LGIFNLEDGSIEPLPCSHFRIRWPPPLWVTPNP 388
>emb|CAN69116.1| hypothetical protein VITISV_031843 [Vitis vinifera]
Length = 389
Score = 138 bits (347), Expect(2) = 2e-33
Identities = 110/367 (29%), Positives = 167/367 (45%), Gaps = 18/367 (4%)
Frame = +3
Query: 99 SQLPDELWSIIGCKLDLAADRFRFRSVCKSWRSXXXXXXXXXXXXXAXXXXXXXXXXXXX 278
SQL EL I K + D RFR+VC +WR+
Sbjct: 5 SQLHPELLDFIAKKFKIYTDYVRFRAVCHNWRASVPKTPHHLPTQLPWLMLPQSQPHHT- 63
Query: 279 XXXXXXXXXXHRGFVGIGEQEVYELDLPEA-HQTRCVGSTGNWLITVGLDTIIRLLNPFT 455
HR F + + + L LPEA H+ R GS+ WL+ + I LLNP T
Sbjct: 64 ----------HRPFFSLSLNKFHFLQLPEASHRRRRRGSSHGWLLILDEAPEIFLLNPLT 113
Query: 456 RVQIDLPSQSTF-------------EYG-STIMSDGVEMAPEDCRDNLVRKVIVXXXXXX 593
R ++ LP STF EY T D + + RD+ ++K I+
Sbjct: 114 RSKVHLPPLSTFPNVVRFNFADVGREYALRTSSGDVYTRSLKKMRDSFIKKTILSSSPAN 173
Query: 594 XXXXXXDCIAMAIHHYWKKLAIARPGDPSWITVQTPKNFVEDIIFYKEQFYAVNYHGVVM 773
D IA+ I + LA+ R D SW ++ +++ ED+IF++ FYAVN +G +
Sbjct: 174 GS----DFIAVVILNQTGDLALCRKSDDSWTFLEDAQSYSEDVIFHRGLFYAVNKYGSIA 229
Query: 774 VCDI-GAFPKASV--LTEQFQRVSLSEKKYXXXXXXXXXXXIKFVEDLYXXXXXXEYTEA 944
VCD+ G+ P+ S+ + +QF + +Y ++++ Y E
Sbjct: 230 VCDVSGSSPRVSIIEMPQQFG----GDLQYLVESGEELLLVTRYLDLTYD-------VEX 278
Query: 945 KKKGLPLYKTENFKVYKLDFANKKWNELSDLGDYCLFLGFNTSVSLLALNHPGSLKKNSI 1124
+ L +Y+T F+V +LD +W +S LGD LFLG N S+SL +++ PG K N I
Sbjct: 279 DQTSL-IYRTTRFQVCRLDSKAPRWEVVSSLGDRALFLGENLSLSLSSVDFPG-CKGNCI 336
Query: 1125 YFTDDYT 1145
Y+TDDY+
Sbjct: 337 YYTDDYS 343
Score = 32.3 bits (72), Expect(2) = 2e-33
Identities = 14/33 (42%), Positives = 19/33 (57%)
Frame = +2
Query: 1223 MGVFDLEDKSIRPHYKGISTSFFSPPLWIVPTP 1321
+G+F+LED SI P + PPLW+ P P
Sbjct: 356 LGIFNLEDGSIEPLPCSHFRIRWPPPLWVTPNP 388
>emb|CAN67605.1| hypothetical protein VITISV_030993 [Vitis vinifera]
Length = 1290
Score = 140 bits (353), Expect = 9e-31
Identities = 106/350 (30%), Positives = 152/350 (43%), Gaps = 2/350 (0%)
Frame = +3
Query: 99 SQLPDELWSIIGCKLDLAADRFRFRSVCKSWRSXXXXXXXXXXXXXAXXXXXXXXXXXXX 278
S++PD+ +I KL D RF VCKSW S +
Sbjct: 923 SKMPDDPLKLIAEKLHSVEDYVRFGGVCKSWYSIFEDKECCCPSSKSPWLMLAEKENSEI 982
Query: 279 XXXXXXXXXXHRGFVGIGEQEVYELDLPEAHQTRCVGSTGNWLITVGLDTIIRLLNPFTR 458
RGF +VYE+ LPE C GS WL+T+G D + LLNP TR
Sbjct: 983 -----------RGFYSPLSGKVYEIRLPEVVGKWCWGSPYGWLVTIGTDLDMCLLNPLTR 1031
Query: 459 VQIDLPSQSTFEYGSTIMSDGVEMAPEDCRDNLVRKVIVXXXXXXXXXXXXDCIAMAIHH 638
VQI LPS +T++ + + +D + K ++ DC M I+
Sbjct: 1032 VQILLPSLRACPNLNTLIDSSTQGSRS--KDIFIYKAVL-----SSAPSSPDCAVMIIYS 1084
Query: 639 YWKKLAIARPGDPSWITVQTPKNFVEDIIFYKEQFYAVNYHGVVMVCDI-GAFPKASVLT 815
+ +LA +PG +W +++ V+DII++ F AVN V +CDI G+ K
Sbjct: 1085 DYGRLAFTKPGHQTWTLLESESGPVDDIIYFNGSFLAVNLSWEVWICDISGSQLKTIRFA 1144
Query: 816 EQFQRVSLSEKKYXXXXXXXXXXXIKFV-EDLYXXXXXXEYTEAKKKGLPLYKTENFKVY 992
+ E +Y I V +LY + ++ +P +T F V
Sbjct: 1145 AAPALQDVDEIEYEAKYLVESGGEIYMVTRNLY---------DTARRDIPYMRTWTFSVL 1195
Query: 993 KLDFANKKWNELSDLGDYCLFLGFNTSVSLLALNHPGSLKKNSIYFTDDY 1142
KLD NK+W E+ +L FLG N S S A ++P +KNSIYFTDDY
Sbjct: 1196 KLDMCNKRWEEVENLDHCSFFLGNNHSFSTWASDYP-EFRKNSIYFTDDY 1244
>ref|XP_002510618.1| ubiquitin-protein ligase, putative [Ricinus communis]
gi|223551319|gb|EEF52805.1| ubiquitin-protein ligase,
putative [Ricinus communis]
Length = 398
Score = 133 bits (334), Expect(2) = 2e-30
Identities = 101/364 (27%), Positives = 166/364 (45%), Gaps = 16/364 (4%)
Frame = +3
Query: 99 SQLPDELWSIIGCKLDLAADRFRFRSVCKSWRSXXXXXXXXXXXXXAXXXXXXXXXXXXX 278
SQLP EL II L + +D R+VC +WR
Sbjct: 6 SQLPPELIEIISKGLTIYSDYLYSRAVCHAWR---------FSIPKTPNHLPPQLPWLML 56
Query: 279 XXXXXXXXXXHRGFVGIGEQEVYELDLPE-AHQTRCVGSTGNWLITVGLDTIIRLLNPFT 455
R F + + + L+LPE +++ R GS+ WL+ + I L+NP T
Sbjct: 57 PQSQSQSNQSRRAFFSLSTNKFHFLNLPEVSYRKRHCGSSHGWLMILDDTPTILLINPLT 116
Query: 456 RVQIDLPSQSTF-------------EYG-STIMSDGVEMAPEDCRDNLVRKVIVXXXXXX 593
R ++ LP S+F EY ++ + V ++ RD+ +RKV++
Sbjct: 117 RAKLSLPPLSSFPNVISFNYSDIGREYALRNLLGERVTVSLRQMRDSFIRKVVLSSSPLK 176
Query: 594 XXXXXXDCIAMAIHHYWKKLAIARPGDPSWITVQTPKNFVEDIIFYKEQFYAVNYHGVVM 773
+ + +AI + LA R GD SW V+ ++F ED+IF FYAVN G ++
Sbjct: 177 DN----NFVVIAILNQTDDLAYCRNGDKSWSLVENARSFCEDVIFVNGMFYAVNKAGQIV 232
Query: 774 VCDIGA-FPKASVLTEQFQRVSLSEKKYXXXXXXXXXXXIKFVEDLYXXXXXXEYTEAKK 950
+CDI + P+ S + + R + + +Y ++++ Y E+
Sbjct: 233 ICDISSDSPRVSFM--ETPRQAGGDMQYLVNSGDELLLVTRYLDLEY------EFDHPDM 284
Query: 951 KGLPLYKTENFKVYKLDFANKKWNELSDLGDYCLFLGFNTSVSLLALNHPGSLKKNSIYF 1130
+ +Y+T F+V++LD+ +W +S LGD LF+G N+S+SL A + G + N IY+
Sbjct: 285 EPHLIYRTIRFEVFRLDWNGPQWLRMSTLGDKALFIGENSSLSLSATDFSGCM-GNCIYY 343
Query: 1131 TDDY 1142
TDDY
Sbjct: 344 TDDY 347
Score = 27.7 bits (60), Expect(2) = 2e-30
Identities = 16/37 (43%), Positives = 22/37 (59%), Gaps = 4/37 (10%)
Frame = +2
Query: 1223 MGVFDLEDKSIRPH--YKGISTS--FFSPPLWIVPTP 1321
+G+F L D++I P Y TS +SPPLW+ P P
Sbjct: 361 LGIFKLCDETIEPLPCYPRNFTSPLQWSPPLWVSPNP 397
>ref|XP_002300674.1| predicted protein [Populus trichocarpa] gi|222842400|gb|EEE79947.1|
predicted protein [Populus trichocarpa]
Length = 393
Score = 124 bits (312), Expect(2) = 3e-28
Identities = 99/367 (26%), Positives = 163/367 (44%), Gaps = 18/367 (4%)
Frame = +3
Query: 99 SQLPDELWSIIGCKLDLAADRFRFRSVCKSWRSXXXXXXXXXXXXXAXXXXXXXXXXXXX 278
+QLP EL II K+ + +D F++VC +W+S
Sbjct: 6 TQLPPELIEIISKKITIYSDYLHFQAVCHAWKSSIPKTPNHLPPQLPWLLLPQSQSNQSS 65
Query: 279 XXXXXXXXXXHRGFVGIGEQEVYELDLPEA-HQTRCVGSTGNWLITVGLDTIIRLLNPFT 455
+R F + + + L+LPEA H+ + GS+ WLI + I ++NP T
Sbjct: 66 ----------YRAFFNLSTYKFHSLNLPEASHRKKHCGSSHGWLIILDDSPSILVINPLT 115
Query: 456 RVQIDLPSQSTFEYGSTIMSDGVEMAPE----------------DCRDNLVRKVIVXXXX 587
R +I LP+ S+F + + D + E RD ++KV++
Sbjct: 116 RRKIHLPAISSFP--NVVSFDYANVGREYLLVNPQGERNTASLRQMRDGFIKKVVMSSSP 173
Query: 588 XXXXXXXXDCIAMAIHHYWKKLAIARPGDPSWITVQTPKNFVEDIIFYKEQFYAVNYHGV 767
+AMAI LA + GD W V+ ++F ED+I++ FYAVN G
Sbjct: 174 LEKKGDFF--VAMAILCSTGDLAYCKNGDECWNIVENSRSFSEDVIYFNGLFYAVNKAGQ 231
Query: 768 VMVCDI-GAFPKASVLTEQFQRVSLSEKKYXXXXXXXXXXXIKFVEDLYXXXXXXEYTEA 944
++VCD+ G PK S + + R + +Y ++++ E+
Sbjct: 232 IVVCDVNGNSPKVSFI--ETPRQIGGDMQYLVSSGDGLLLVTRYLD------LDVEF--- 280
Query: 945 KKKGLPLYKTENFKVYKLDFANKKWNELSDLGDYCLFLGFNTSVSLLALNHPGSLKKNSI 1124
+ +YKT F+V+KLD +W ++ LGD LF+G N+S++L A G + + I
Sbjct: 281 ---DIFIYKTARFEVFKLDLNGPRWERVTSLGDMMLFIGENSSLALSASGLSGCM-GDCI 336
Query: 1125 YFTDDYT 1145
Y+TDDY+
Sbjct: 337 YYTDDYS 343
Score = 28.5 bits (62), Expect(2) = 3e-28
Identities = 15/37 (40%), Positives = 18/37 (48%), Gaps = 4/37 (10%)
Frame = +2
Query: 1223 MGVFDLEDKSIRP----HYKGISTSFFSPPLWIVPTP 1321
+G+F L D SI P S + PPLWI P P
Sbjct: 356 LGIFKLSDGSIEPLPCYPRNSYSRLQWPPPLWISPNP 392