BLASTX nr result

ID: Cimicifuga21_contig00008376 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00008376
         (663 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002327897.1| glutaredoxin [Populus trichocarpa] gi|222837...   141   1e-31
gb|ABK96346.1| unknown [Populus trichocarpa x Populus deltoides]      139   4e-31
ref|XP_002310416.1| glutaredoxin [Populus trichocarpa] gi|222853...   139   6e-31
ref|XP_002278515.1| PREDICTED: glutaredoxin-C9-like [Vitis vinif...   138   1e-30
ref|XP_002517842.1| glutaredoxin, grx, putative [Ricinus communi...   137   1e-30

>ref|XP_002327897.1| glutaredoxin [Populus trichocarpa] gi|222837306|gb|EEE75685.1|
           glutaredoxin [Populus trichocarpa]
          Length = 155

 Score =  141 bits (355), Expect = 1e-31
 Identities = 74/155 (47%), Positives = 96/155 (61%), Gaps = 10/155 (6%)
 Frame = +3

Query: 30  MQQALPYRLWLSPST---PVIPPESSFRNEASSS-------REKSKDVKDMVSENAVILF 179
           MQQA+PY+ WL   T   P+I P     + ++          + S+++ +MV ENA+I+F
Sbjct: 1   MQQAIPYKSWLPLYTNNKPLISPSQLISHHSNGGVVAAQEVLKGSRNISEMVQENAIIVF 60

Query: 180 GKRGCCMCHAMKRLLLMLGVNPAVYXXXXXXXXXXXXXLLMISREGGNGNKDGSRPQFPA 359
            +RGCCM H  KRLLL LGVNPAVY             L MI  + G    +  + QFPA
Sbjct: 61  ARRGCCMSHVAKRLLLGLGVNPAVYEIDEADEISVLEELEMIGNDIGGKGNNKKKVQFPA 120

Query: 360 MFIGGKMFGGLDRLMAAHISGELIPMLKQAGALWL 464
           + IGGK+FGGLD LMA HISGEL+P+LK+AGALWL
Sbjct: 121 LVIGGKLFGGLDTLMATHISGELVPILKEAGALWL 155


>gb|ABK96346.1| unknown [Populus trichocarpa x Populus deltoides]
          Length = 154

 Score =  139 bits (351), Expect = 4e-31
 Identities = 77/156 (49%), Positives = 98/156 (62%), Gaps = 11/156 (7%)
 Frame = +3

Query: 30  MQQALPYRLW---LSPSTPVIPPESSFRNEASSSR--------EKSKDVKDMVSENAVIL 176
           MQQA+PY+ W    + + P+I P        S+          + S ++  MV ENA+I+
Sbjct: 1   MQQAIPYKSWPPLYTNNKPLISPFQLIAGRHSNGGVVATQEVLKGSGNMSKMVQENAIIV 60

Query: 177 FGKRGCCMCHAMKRLLLMLGVNPAVYXXXXXXXXXXXXXLLMISREGGNGNKDGSRPQFP 356
           F +RGCCM    KRLLL LGVNPAVY             L MI  +GG G+K   + QFP
Sbjct: 61  FARRGCCMSLVAKRLLLGLGVNPAVYEIDEADEISVLEELEMICNDGGKGSK--KKVQFP 118

Query: 357 AMFIGGKMFGGLDRLMAAHISGELIPMLKQAGALWL 464
           A+FIGGK+FGGLD+LMAAHISGEL+P+LK+AGALWL
Sbjct: 119 ALFIGGKLFGGLDKLMAAHISGELVPILKEAGALWL 154


>ref|XP_002310416.1| glutaredoxin [Populus trichocarpa] gi|222853319|gb|EEE90866.1|
           glutaredoxin [Populus trichocarpa]
          Length = 153

 Score =  139 bits (349), Expect = 6e-31
 Identities = 76/155 (49%), Positives = 97/155 (62%), Gaps = 10/155 (6%)
 Frame = +3

Query: 30  MQQALPYRLW---LSPSTPVIPPESSFRNEASSSREKSKDV-------KDMVSENAVILF 179
           MQQA+PY+ W    + + P+I P        +     +++V         MV ENA+I+F
Sbjct: 1   MQQAIPYKSWPPLYTNNKPLISPFQLIARHNNGGVVATQEVLKGSGNMSKMVQENAIIVF 60

Query: 180 GKRGCCMCHAMKRLLLMLGVNPAVYXXXXXXXXXXXXXLLMISREGGNGNKDGSRPQFPA 359
            +RGCCM    KRLLL LGVNPAVY             L MI  +GG G+K   + QFPA
Sbjct: 61  ARRGCCMSLVAKRLLLGLGVNPAVYEIDEADEISVLEELEMICNDGGKGSK--KKVQFPA 118

Query: 360 MFIGGKMFGGLDRLMAAHISGELIPMLKQAGALWL 464
           +FIGGK+FGGLD+LMAAHISGEL+P+LK+AGALWL
Sbjct: 119 LFIGGKLFGGLDKLMAAHISGELVPILKEAGALWL 153


>ref|XP_002278515.1| PREDICTED: glutaredoxin-C9-like [Vitis vinifera]
          Length = 150

 Score =  138 bits (347), Expect = 1e-30
 Identities = 76/154 (49%), Positives = 96/154 (62%), Gaps = 9/154 (5%)
 Frame = +3

Query: 30  MQQALPYRLWL---------SPSTPVIPPESSFRNEASSSREKSKDVKDMVSENAVILFG 182
           M QALPYR W+          PS+  I P     N     ++ +   K MVSENAVI+FG
Sbjct: 1   MHQALPYRTWVPTTGGGSSAGPSSATIEPSDGPMNPGVGMKDVTCVTK-MVSENAVIVFG 59

Query: 183 KRGCCMCHAMKRLLLMLGVNPAVYXXXXXXXXXXXXXLLMISREGGNGNKDGSRPQFPAM 362
           +RGCCMCH + RLLL LGVNP V+             L  +    G   K+G RPQFPA+
Sbjct: 60  RRGCCMCHVVMRLLLGLGVNPTVFEVDEEDEAAVVDELSRVI--AGEDAKEG-RPQFPAV 116

Query: 363 FIGGKMFGGLDRLMAAHISGELIPMLKQAGALWL 464
           F+GG++FGGL+R+MA HISGEL+P+LK+AGALWL
Sbjct: 117 FMGGQLFGGLERVMATHISGELVPILKKAGALWL 150


>ref|XP_002517842.1| glutaredoxin, grx, putative [Ricinus communis]
           gi|223542824|gb|EEF44360.1| glutaredoxin, grx, putative
           [Ricinus communis]
          Length = 149

 Score =  137 bits (346), Expect = 1e-30
 Identities = 72/151 (47%), Positives = 99/151 (65%), Gaps = 6/151 (3%)
 Frame = +3

Query: 30  MQQALPYRLWLSPSTPVIPPESSFRNEASSSREKSK---DVKDMVSENAVILFGKRGCCM 200
           MQQA+PY+ WL   T    P + F    +++++  K   ++ +MV ENA+I+F K+GCCM
Sbjct: 1   MQQAIPYKSWLPLYTKTTSPLTLFGTATTAAKQVLKGSTNMGNMVRENAIIVFAKKGCCM 60

Query: 201 CHAMKRLLLMLGVNPAVYXXXXXXXXXXXXXLLMI---SREGGNGNKDGSRPQFPAMFIG 371
            H +KRLLL LGVNP ++             L +I   +++  NGN D  + Q PA+FIG
Sbjct: 61  SHVVKRLLLGLGVNPPIFEIDEQEEISVLQELELIVDNNKDDNNGNDD--KVQLPAVFIG 118

Query: 372 GKMFGGLDRLMAAHISGELIPMLKQAGALWL 464
           G++FGGLDRLMA HISGEL+P+LK AGALWL
Sbjct: 119 GRLFGGLDRLMATHISGELVPILKDAGALWL 149


Top