BLASTX nr result

ID: Cimicifuga21_contig00008358 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00008358
         (1212 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003538916.1| PREDICTED: protein FAR1-RELATED SEQUENCE 5-l...    72   2e-10
ref|XP_002283202.1| PREDICTED: protein FAR1-RELATED SEQUENCE 5-l...    72   2e-10
emb|CAN68194.1| hypothetical protein VITISV_036221 [Vitis vinifera]    72   2e-10
ref|XP_003565960.1| PREDICTED: uncharacterized protein LOC100824...    71   6e-10
ref|XP_003575595.1| PREDICTED: uncharacterized protein LOC100837...    70   8e-10

>ref|XP_003538916.1| PREDICTED: protein FAR1-RELATED SEQUENCE 5-like [Glycine max]
          Length = 790

 Score = 72.4 bits (176), Expect = 2e-10
 Identities = 56/193 (29%), Positives = 91/193 (47%), Gaps = 2/193 (1%)
 Frame = +3

Query: 486  NDIQLELDVSSLNDNQVLEPDVSYLNDNQVLEPDVS--TMEPDVSSYFKTPEKGGENDVM 659
            +D  +E D+  L D+  ++ +    +D  ++  D S  T    +++       GG+ ++ 
Sbjct: 9    SDEVIEFDMIGLGDDAAIDTEHPVEDDEDLVNIDNSPATAFTVLAAGLGPHIAGGDTNLE 68

Query: 660  PYQGKIFESMEKAKKCYELYGQQKGFPTHINNTTCRIPRDNHPSLCVFVCGCQGNPKKQW 839
            P QG  FES E AK  Y  Y ++ GF T ++ +  R  RD       FVC  +G   ++ 
Sbjct: 69   PCQGMEFESEEAAKAFYNSYARRVGFSTRVSMSR-RSRRDGSIIQRSFVCAKEGFRVERE 127

Query: 840  SKQADNLEKPIIRRRTSTMKCGCKAQMRVVRNKKGEWVVSLFADKHNHDFVTPGPKRILM 1019
                D      ++R  +  + GCKA + V     G WVVS F  +HNH+ V P  K   +
Sbjct: 128  KHLVDGR----VKRPRAETRVGCKAMLVVKIQDSGRWVVSSFLKEHNHELVPP-DKVHCL 182

Query: 1020 NANRSMPEIAKSL 1058
             ++R +   AKSL
Sbjct: 183  RSHRHVSGPAKSL 195


>ref|XP_002283202.1| PREDICTED: protein FAR1-RELATED SEQUENCE 5-like [Vitis vinifera]
          Length = 783

 Score = 72.4 bits (176), Expect = 2e-10
 Identities = 54/169 (31%), Positives = 83/169 (49%), Gaps = 5/169 (2%)
 Frame = +3

Query: 642  GENDVMPYQGKIFESMEKAKKCYELYGQQKGFPTHINNTTCRIPRDNHPSLCVFVCGCQG 821
            G+ D+ PY+G  FES E AK  Y  Y ++ GF T ++++  R  RD       FVC  +G
Sbjct: 55   GDLDLEPYEGMEFESEEAAKAFYNSYARRVGFSTRVSSSR-RSRRDGAIIQRSFVCAKEG 113

Query: 822  NPKKQWSKQADNLEKPIIRRRTSTMKCGCKAQMRVVRNKKGEWVVSLFADKHNHDFVTPG 1001
                   +  D   + I R RT T + GCKA + V     G+WVVS F  +HNH+ V P 
Sbjct: 114  FRNLNEKRTKD---REIKRPRTIT-RVGCKASLSVKIQDSGKWVVSGFTKEHNHELVPP- 168

Query: 1002 PKRILMNANRSMPEIAKSLSVAFEEENLPVGKVCAVL-----GGATIGF 1133
             K   + ++R +   AK+L    +   +   ++ + L     G + +GF
Sbjct: 169  DKVHCLRSHRQISGPAKTLIDTLQAAGMGPRRIMSALIKEYGGISKVGF 217


>emb|CAN68194.1| hypothetical protein VITISV_036221 [Vitis vinifera]
          Length = 841

 Score = 72.4 bits (176), Expect = 2e-10
 Identities = 54/169 (31%), Positives = 83/169 (49%), Gaps = 5/169 (2%)
 Frame = +3

Query: 642  GENDVMPYQGKIFESMEKAKKCYELYGQQKGFPTHINNTTCRIPRDNHPSLCVFVCGCQG 821
            G+ D+ PY+G  FES E AK  Y  Y ++ GF T ++++  R  RD       FVC  +G
Sbjct: 55   GDLDLEPYEGMEFESEEAAKAFYNSYARRVGFSTRVSSSR-RSRRDGAIIQRSFVCAKEG 113

Query: 822  NPKKQWSKQADNLEKPIIRRRTSTMKCGCKAQMRVVRNKKGEWVVSLFADKHNHDFVTPG 1001
                   +  D   + I R RT T + GCKA + V     G+WVVS F  +HNH+ V P 
Sbjct: 114  FRNLNEKRTKD---REIKRPRTIT-RVGCKASLSVKIQDSGKWVVSGFTKEHNHELVPP- 168

Query: 1002 PKRILMNANRSMPEIAKSLSVAFEEENLPVGKVCAVL-----GGATIGF 1133
             K   + ++R +   AK+L    +   +   ++ + L     G + +GF
Sbjct: 169  DKVHCLRSHRQISGPAKTLIDTLQAAGMGPRRIMSALIKEYGGISKVGF 217


>ref|XP_003565960.1| PREDICTED: uncharacterized protein LOC100824373 [Brachypodium
            distachyon]
          Length = 451

 Score = 70.9 bits (172), Expect = 6e-10
 Identities = 49/149 (32%), Positives = 77/149 (51%), Gaps = 7/149 (4%)
 Frame = +3

Query: 627  TPEKGGENDVMPYQGKIFESMEKAKKCYELYGQQKGFPTHINNTTCRIPRDNHPSLCVFV 806
            TPE   + ++ P  G  F++ME+ ++ Y+ Y    GF   I +   +   DN      F+
Sbjct: 85   TPEC--DENLKPAVGMAFDNMEEVEEFYKAYAHNVGFSVRIGH---KRTVDNVVVWRRFL 139

Query: 807  CGCQG-------NPKKQWSKQADNLEKPIIRRRTSTMKCGCKAQMRVVRNKKGEWVVSLF 965
            CG  G        PKK+ + +    EK     R  T +CGC+A + V R K G++ VS F
Sbjct: 140  CGKSGFRRNNEEEPKKELNGEKKGDEKKRTHARKIT-RCGCEAMITVKRMKDGKYAVSYF 198

Query: 966  ADKHNHDFVTPGPKRILMNANRSMPEIAK 1052
             ++H H+FVTP  K+ L+ +NR + + AK
Sbjct: 199  HEEHTHEFVTP-RKQHLIKSNRQVSDKAK 226


>ref|XP_003575595.1| PREDICTED: uncharacterized protein LOC100837102 [Brachypodium
            distachyon]
          Length = 451

 Score = 70.5 bits (171), Expect = 8e-10
 Identities = 49/149 (32%), Positives = 76/149 (51%), Gaps = 7/149 (4%)
 Frame = +3

Query: 627  TPEKGGENDVMPYQGKIFESMEKAKKCYELYGQQKGFPTHINNTTCRIPRDNHPSLCVFV 806
            TPE   + ++ P  G  F++ME+ ++ Y+ Y    GF   I     +   DN      F+
Sbjct: 85   TPEC--DENLKPAVGMAFDNMEEVEEFYKAYAHNVGFSVRIGQ---KRTVDNVVVWRRFL 139

Query: 807  CGCQG-------NPKKQWSKQADNLEKPIIRRRTSTMKCGCKAQMRVVRNKKGEWVVSLF 965
            CG  G        PKK+ + +    EK     R  T +CGC+A + V R K G++ VS F
Sbjct: 140  CGKSGFRRNNEEEPKKELNGEKKGDEKKRTHARKIT-RCGCEAMITVKRMKDGKYAVSYF 198

Query: 966  ADKHNHDFVTPGPKRILMNANRSMPEIAK 1052
             ++H H+FVTP  K+ L+ +NR + + AK
Sbjct: 199  HEEHTHEFVTP-RKQHLIKSNRQVSDKAK 226


Top