BLASTX nr result

ID: Cimicifuga21_contig00008346 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00008346
         (1893 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002325387.1| predicted protein [Populus trichocarpa] gi|2...    87   1e-28
ref|XP_003532014.1| PREDICTED: serine/arginine-rich splicing fac...    87   2e-28
ref|XP_002534324.1| arginine/serine-rich splicing factor, putati...    86   4e-28
ref|XP_004155352.1| PREDICTED: serine/arginine-rich splicing fac...    85   1e-27
ref|XP_004135236.1| PREDICTED: LOW QUALITY PROTEIN: serine/argin...    85   1e-27

>ref|XP_002325387.1| predicted protein [Populus trichocarpa] gi|222862262|gb|EEE99768.1|
            predicted protein [Populus trichocarpa]
          Length = 179

 Score = 87.0 bits (214), Expect(2) = 1e-28
 Identities = 38/45 (84%), Positives = 45/45 (100%)
 Frame = -2

Query: 1733 MSRVYVGNLDPRVSDREIEEEFRVFGVLRSVWVARKPPGYAFVEF 1599
            MSRVYVGNLDPRVS+R++E+EFR++GVLRSVWVAR+PPGYAFVEF
Sbjct: 1    MSRVYVGNLDPRVSERDLEDEFRMYGVLRSVWVARRPPGYAFVEF 45



 Score = 67.8 bits (164), Expect(2) = 1e-28
 Identities = 30/34 (88%), Positives = 33/34 (97%)
 Frame = -1

Query: 1539 YAFVEFEDRRDALDAIRALEGKNNWRVELSHNSK 1438
            YAFVEF+DRRDA+DAIRAL+GKN WRVELSHNSK
Sbjct: 40   YAFVEFDDRRDAIDAIRALDGKNGWRVELSHNSK 73


>ref|XP_003532014.1| PREDICTED: serine/arginine-rich splicing factor 7-like [Glycine max]
          Length = 176

 Score = 87.4 bits (215), Expect(2) = 2e-28
 Identities = 37/45 (82%), Positives = 45/45 (100%)
 Frame = -2

Query: 1733 MSRVYVGNLDPRVSDREIEEEFRVFGVLRSVWVARKPPGYAFVEF 1599
            MSRVYVGNLDPRVS+R++E+EFR++GVLRSVWVAR+PPGYAF+EF
Sbjct: 1    MSRVYVGNLDPRVSERDLEDEFRIYGVLRSVWVARRPPGYAFIEF 45



 Score = 66.6 bits (161), Expect(2) = 2e-28
 Identities = 29/34 (85%), Positives = 33/34 (97%)
 Frame = -1

Query: 1539 YAFVEFEDRRDALDAIRALEGKNNWRVELSHNSK 1438
            YAF+EF+DRRDALDAI+AL+GKN WRVELSHNSK
Sbjct: 40   YAFIEFDDRRDALDAIQALDGKNGWRVELSHNSK 73


>ref|XP_002534324.1| arginine/serine-rich splicing factor, putative [Ricinus communis]
            gi|223525498|gb|EEF28060.1| arginine/serine-rich splicing
            factor, putative [Ricinus communis]
          Length = 184

 Score = 85.9 bits (211), Expect(2) = 4e-28
 Identities = 37/45 (82%), Positives = 45/45 (100%)
 Frame = -2

Query: 1733 MSRVYVGNLDPRVSDREIEEEFRVFGVLRSVWVARKPPGYAFVEF 1599
            M+RVYVGNLDPRVS+R++E+EFR++GVLRSVWVAR+PPGYAFVEF
Sbjct: 1    MARVYVGNLDPRVSERDLEDEFRMYGVLRSVWVARRPPGYAFVEF 45



 Score = 67.4 bits (163), Expect(2) = 4e-28
 Identities = 30/34 (88%), Positives = 33/34 (97%)
 Frame = -1

Query: 1539 YAFVEFEDRRDALDAIRALEGKNNWRVELSHNSK 1438
            YAFVEF+DRRDA+DAIRAL+GKN WRVELSHNSK
Sbjct: 40   YAFVEFDDRRDAVDAIRALDGKNGWRVELSHNSK 73


>ref|XP_004155352.1| PREDICTED: serine/arginine-rich splicing factor RSZ22-like [Cucumis
            sativus]
          Length = 188

 Score = 85.1 bits (209), Expect(2) = 1e-27
 Identities = 35/45 (77%), Positives = 45/45 (100%)
 Frame = -2

Query: 1733 MSRVYVGNLDPRVSDREIEEEFRVFGVLRSVWVARKPPGYAFVEF 1599
            M+RVY+GNLDPRV++R++E+EFR+FGVLRSVWVAR+PPGYAF+EF
Sbjct: 1    MTRVYIGNLDPRVTERDLEDEFRMFGVLRSVWVARRPPGYAFIEF 45



 Score = 66.6 bits (161), Expect(2) = 1e-27
 Identities = 29/34 (85%), Positives = 33/34 (97%)
 Frame = -1

Query: 1539 YAFVEFEDRRDALDAIRALEGKNNWRVELSHNSK 1438
            YAF+EF+DRRDALDAI+AL+GKN WRVELSHNSK
Sbjct: 40   YAFIEFDDRRDALDAIQALDGKNGWRVELSHNSK 73


>ref|XP_004135236.1| PREDICTED: LOW QUALITY PROTEIN: serine/arginine-rich splicing factor
            RSZ21-like [Cucumis sativus]
          Length = 158

 Score = 85.1 bits (209), Expect(2) = 1e-27
 Identities = 35/45 (77%), Positives = 45/45 (100%)
 Frame = -2

Query: 1733 MSRVYVGNLDPRVSDREIEEEFRVFGVLRSVWVARKPPGYAFVEF 1599
            M+RVY+GNLDPRV++R++E+EFR+FGVLRSVWVAR+PPGYAF+EF
Sbjct: 1    MTRVYIGNLDPRVTERDLEDEFRMFGVLRSVWVARRPPGYAFIEF 45



 Score = 66.6 bits (161), Expect(2) = 1e-27
 Identities = 29/34 (85%), Positives = 33/34 (97%)
 Frame = -1

Query: 1539 YAFVEFEDRRDALDAIRALEGKNNWRVELSHNSK 1438
            YAF+EF+DRRDALDAI+AL+GKN WRVELSHNSK
Sbjct: 40   YAFIEFDDRRDALDAIQALDGKNGWRVELSHNSK 73


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