BLASTX nr result

ID: Cimicifuga21_contig00008345 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00008345
         (1124 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003608622.1| Zinc finger protein LSD1 [Medicago truncatul...   107   4e-21
gb|AFK36740.1| unknown [Lotus japonicus]                              107   5e-21
ref|XP_003517373.1| PREDICTED: protein LOL1-like [Glycine max]        107   7e-21
gb|AFW61165.1| hypothetical protein ZEAMMB73_950191 [Zea mays]        106   9e-21
gb|AAG51243.1|AC055769_2 zinc-finger protein, putative; 7043-777...   105   2e-20

>ref|XP_003608622.1| Zinc finger protein LSD1 [Medicago truncatula]
           gi|217075072|gb|ACJ85896.1| unknown [Medicago
           truncatula] gi|217075520|gb|ACJ86120.1| unknown
           [Medicago truncatula] gi|355509677|gb|AES90819.1| Zinc
           finger protein LSD1 [Medicago truncatula]
           gi|388499772|gb|AFK37952.1| unknown [Medicago
           truncatula] gi|388500106|gb|AFK38119.1| unknown
           [Medicago truncatula]
          Length = 154

 Score =  107 bits (268), Expect = 4e-21
 Identities = 60/104 (57%), Positives = 61/104 (58%)
 Frame = -2

Query: 823 NGAQSQLVCSGCRNLLLYPVGATSXXXXXXXXXXXXXXPGTEMAQLVCGGCHTLLMYIRX 644
           NGAQSQLVCSGCRNLL+YPVGATS              PGTEMAQLVCGGCHTLLMYIR 
Sbjct: 28  NGAQSQLVCSGCRNLLMYPVGATSVCCAVCNAVTAVPPPGTEMAQLVCGGCHTLLMYIR- 86

Query: 643 XXXXXXXXXXXXXXXXXXXXXXXXXXXXTSVQCSCCHTVNLALE 512
                                       TSVQCSCCHTVNLALE
Sbjct: 87  --------------------------GATSVQCSCCHTVNLALE 104


>gb|AFK36740.1| unknown [Lotus japonicus]
          Length = 145

 Score =  107 bits (267), Expect = 5e-21
 Identities = 60/104 (57%), Positives = 61/104 (58%)
 Frame = -2

Query: 823 NGAQSQLVCSGCRNLLLYPVGATSXXXXXXXXXXXXXXPGTEMAQLVCGGCHTLLMYIRX 644
           NGAQSQLVCSGCRNLL+YPVGATS              PGTEMAQLVCGGCHTLLMYIR 
Sbjct: 20  NGAQSQLVCSGCRNLLVYPVGATSVCCAVCNAVTSVPPPGTEMAQLVCGGCHTLLMYIR- 78

Query: 643 XXXXXXXXXXXXXXXXXXXXXXXXXXXXTSVQCSCCHTVNLALE 512
                                       TSVQCSCCHTVNLALE
Sbjct: 79  --------------------------GATSVQCSCCHTVNLALE 96


>ref|XP_003517373.1| PREDICTED: protein LOL1-like [Glycine max]
          Length = 147

 Score =  107 bits (266), Expect = 7e-21
 Identities = 60/104 (57%), Positives = 60/104 (57%)
 Frame = -2

Query: 823 NGAQSQLVCSGCRNLLLYPVGATSXXXXXXXXXXXXXXPGTEMAQLVCGGCHTLLMYIRX 644
           NGAQSQLVCSGCRNLLLYPVGATS              PGTEMAQLVCGGCHT LMYIR 
Sbjct: 22  NGAQSQLVCSGCRNLLLYPVGATSVCCAVCNAVTTVPPPGTEMAQLVCGGCHTFLMYIR- 80

Query: 643 XXXXXXXXXXXXXXXXXXXXXXXXXXXXTSVQCSCCHTVNLALE 512
                                       TSVQCSCCHTVNLALE
Sbjct: 81  --------------------------GATSVQCSCCHTVNLALE 98


>gb|AFW61165.1| hypothetical protein ZEAMMB73_950191 [Zea mays]
          Length = 135

 Score =  106 bits (265), Expect = 9e-21
 Identities = 58/105 (55%), Positives = 61/105 (58%)
 Frame = -2

Query: 823 NGAQSQLVCSGCRNLLLYPVGATSXXXXXXXXXXXXXXPGTEMAQLVCGGCHTLLMYIRX 644
           NGAQSQLVC+GCRNLL+YP GATS              PGTEMAQLVCGGCHTLLMYIR 
Sbjct: 19  NGAQSQLVCTGCRNLLMYPAGATSVCCAVCSTVTAVPAPGTEMAQLVCGGCHTLLMYIR- 77

Query: 643 XXXXXXXXXXXXXXXXXXXXXXXXXXXXTSVQCSCCHTVNLALEG 509
                                       TSVQCSCCHTVNLA+EG
Sbjct: 78  --------------------------GATSVQCSCCHTVNLAMEG 96


>gb|AAG51243.1|AC055769_2 zinc-finger protein, putative; 7043-7771 [Arabidopsis thaliana]
          Length = 110

 Score =  105 bits (263), Expect = 2e-20
 Identities = 59/105 (56%), Positives = 61/105 (58%)
 Frame = -2

Query: 814 QSQLVCSGCRNLLLYPVGATSXXXXXXXXXXXXXXPGTEMAQLVCGGCHTLLMYIRXXXX 635
           QSQLVCSGCRNLL+YPVGATS              PGTEMAQLVCGGCHTLLMYIR    
Sbjct: 32  QSQLVCSGCRNLLMYPVGATSVCCAVCNAVTAVPPPGTEMAQLVCGGCHTLLMYIR---- 87

Query: 634 XXXXXXXXXXXXXXXXXXXXXXXXXTSVQCSCCHTVNLALEGIDA 500
                                    TSVQCSCCHTVNLALEG+ A
Sbjct: 88  -----------------------GATSVQCSCCHTVNLALEGLHA 109


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