BLASTX nr result
ID: Cimicifuga21_contig00008345
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Cimicifuga21_contig00008345 (1124 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_003608622.1| Zinc finger protein LSD1 [Medicago truncatul... 107 4e-21 gb|AFK36740.1| unknown [Lotus japonicus] 107 5e-21 ref|XP_003517373.1| PREDICTED: protein LOL1-like [Glycine max] 107 7e-21 gb|AFW61165.1| hypothetical protein ZEAMMB73_950191 [Zea mays] 106 9e-21 gb|AAG51243.1|AC055769_2 zinc-finger protein, putative; 7043-777... 105 2e-20 >ref|XP_003608622.1| Zinc finger protein LSD1 [Medicago truncatula] gi|217075072|gb|ACJ85896.1| unknown [Medicago truncatula] gi|217075520|gb|ACJ86120.1| unknown [Medicago truncatula] gi|355509677|gb|AES90819.1| Zinc finger protein LSD1 [Medicago truncatula] gi|388499772|gb|AFK37952.1| unknown [Medicago truncatula] gi|388500106|gb|AFK38119.1| unknown [Medicago truncatula] Length = 154 Score = 107 bits (268), Expect = 4e-21 Identities = 60/104 (57%), Positives = 61/104 (58%) Frame = -2 Query: 823 NGAQSQLVCSGCRNLLLYPVGATSXXXXXXXXXXXXXXPGTEMAQLVCGGCHTLLMYIRX 644 NGAQSQLVCSGCRNLL+YPVGATS PGTEMAQLVCGGCHTLLMYIR Sbjct: 28 NGAQSQLVCSGCRNLLMYPVGATSVCCAVCNAVTAVPPPGTEMAQLVCGGCHTLLMYIR- 86 Query: 643 XXXXXXXXXXXXXXXXXXXXXXXXXXXXTSVQCSCCHTVNLALE 512 TSVQCSCCHTVNLALE Sbjct: 87 --------------------------GATSVQCSCCHTVNLALE 104 >gb|AFK36740.1| unknown [Lotus japonicus] Length = 145 Score = 107 bits (267), Expect = 5e-21 Identities = 60/104 (57%), Positives = 61/104 (58%) Frame = -2 Query: 823 NGAQSQLVCSGCRNLLLYPVGATSXXXXXXXXXXXXXXPGTEMAQLVCGGCHTLLMYIRX 644 NGAQSQLVCSGCRNLL+YPVGATS PGTEMAQLVCGGCHTLLMYIR Sbjct: 20 NGAQSQLVCSGCRNLLVYPVGATSVCCAVCNAVTSVPPPGTEMAQLVCGGCHTLLMYIR- 78 Query: 643 XXXXXXXXXXXXXXXXXXXXXXXXXXXXTSVQCSCCHTVNLALE 512 TSVQCSCCHTVNLALE Sbjct: 79 --------------------------GATSVQCSCCHTVNLALE 96 >ref|XP_003517373.1| PREDICTED: protein LOL1-like [Glycine max] Length = 147 Score = 107 bits (266), Expect = 7e-21 Identities = 60/104 (57%), Positives = 60/104 (57%) Frame = -2 Query: 823 NGAQSQLVCSGCRNLLLYPVGATSXXXXXXXXXXXXXXPGTEMAQLVCGGCHTLLMYIRX 644 NGAQSQLVCSGCRNLLLYPVGATS PGTEMAQLVCGGCHT LMYIR Sbjct: 22 NGAQSQLVCSGCRNLLLYPVGATSVCCAVCNAVTTVPPPGTEMAQLVCGGCHTFLMYIR- 80 Query: 643 XXXXXXXXXXXXXXXXXXXXXXXXXXXXTSVQCSCCHTVNLALE 512 TSVQCSCCHTVNLALE Sbjct: 81 --------------------------GATSVQCSCCHTVNLALE 98 >gb|AFW61165.1| hypothetical protein ZEAMMB73_950191 [Zea mays] Length = 135 Score = 106 bits (265), Expect = 9e-21 Identities = 58/105 (55%), Positives = 61/105 (58%) Frame = -2 Query: 823 NGAQSQLVCSGCRNLLLYPVGATSXXXXXXXXXXXXXXPGTEMAQLVCGGCHTLLMYIRX 644 NGAQSQLVC+GCRNLL+YP GATS PGTEMAQLVCGGCHTLLMYIR Sbjct: 19 NGAQSQLVCTGCRNLLMYPAGATSVCCAVCSTVTAVPAPGTEMAQLVCGGCHTLLMYIR- 77 Query: 643 XXXXXXXXXXXXXXXXXXXXXXXXXXXXTSVQCSCCHTVNLALEG 509 TSVQCSCCHTVNLA+EG Sbjct: 78 --------------------------GATSVQCSCCHTVNLAMEG 96 >gb|AAG51243.1|AC055769_2 zinc-finger protein, putative; 7043-7771 [Arabidopsis thaliana] Length = 110 Score = 105 bits (263), Expect = 2e-20 Identities = 59/105 (56%), Positives = 61/105 (58%) Frame = -2 Query: 814 QSQLVCSGCRNLLLYPVGATSXXXXXXXXXXXXXXPGTEMAQLVCGGCHTLLMYIRXXXX 635 QSQLVCSGCRNLL+YPVGATS PGTEMAQLVCGGCHTLLMYIR Sbjct: 32 QSQLVCSGCRNLLMYPVGATSVCCAVCNAVTAVPPPGTEMAQLVCGGCHTLLMYIR---- 87 Query: 634 XXXXXXXXXXXXXXXXXXXXXXXXXTSVQCSCCHTVNLALEGIDA 500 TSVQCSCCHTVNLALEG+ A Sbjct: 88 -----------------------GATSVQCSCCHTVNLALEGLHA 109